RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 LRRC29Q8WV35 223 aa4.47□□□□□ -1.69
VAPA-203ENST00000577539 TAF15Q92804 592 aaKnown RBP eCLIP4.47□□□□□ -1.69
VAPA-203ENST00000577539 TCEAL7Q9BRU2 100 aa4.47□□□□□ -1.69
VAPA-203ENST00000577539 TMPRSS5Q9H3S3 457 aa4.47□□□□□ -1.69
VAPA-203ENST00000577539 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.47□□□□□ -1.69
VAPA-203ENST00000577539 PLCE1Q9P212 2302 aa4.47□□□□□ -1.69
VAPA-203ENST00000577539 PKDREJQ9NTG1 2253 aa4.47□□□□□ -1.69
VAPA-203ENST00000577539 A0A1B0GW64 132 aa4.47□□□□□ -1.69
VAPA-203ENST00000577539 A0A1B0GWJ7 208 aa4.47□□□□□ -1.69
VAPA-203ENST00000577539 ODAMA1E959 279 aa4.47□□□□□ -1.69
VAPA-203ENST00000577539 ZNF737O75373 536 aa4.47□□□□□ -1.69
VAPA-203ENST00000577539 TRGC2P03986 189 aa4.47□□□□□ -1.69
VAPA-203ENST00000577539 FABP1P07148 127 aa4.47□□□□□ -1.69
VAPA-203ENST00000577539 OR8U8P0C7N1 319 aa4.47□□□□□ -1.69
VAPA-203ENST00000577539 DEFA4P12838 97 aa4.47□□□□□ -1.69
VAPA-203ENST00000577539 PAX6P26367 422 aa4.47□□□□□ -1.69
VAPA-203ENST00000577539 DEFB109BQ30KR1 87 aa4.47□□□□□ -1.69
VAPA-203ENST00000577539 HEPN1Q6WQI6 88 aa4.47□□□□□ -1.69
VAPA-203ENST00000577539 TMEM116Q8NCL8 245 aa4.47□□□□□ -1.69
VAPA-203ENST00000577539 OR8G5Q8NG78 346 aa4.47□□□□□ -1.69
VAPA-203ENST00000577539 OCC1Q8TAD7 63 aa4.47□□□□□ -1.69
VAPA-203ENST00000577539 HINT2Q9BX68 163 aa4.47□□□□□ -1.69
VAPA-203ENST00000577539 WDR61Q9GZS3 305 aaKnown RBP4.47□□□□□ -1.69
VAPA-203ENST00000577539 CXXC4Q9H2H0 198 aa4.47□□□□□ -1.69
VAPA-203ENST00000577539 ACACAQ13085 2346 aa4.46□□□□□ -1.69
VAPA-203ENST00000577539 POLEQ07864 2286 aa4.46□□□□□ -1.69
VAPA-203ENST00000577539 OOEPA6NGQ2 149 aa4.46□□□□□ -1.7
VAPA-203ENST00000577539 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.46□□□□□ -1.7
VAPA-203ENST00000577539 MLNRO43193 412 aa4.46□□□□□ -1.7
VAPA-203ENST00000577539 SPINT2O43291 252 aa4.46□□□□□ -1.7
VAPA-203ENST00000577539 FCGR3BO75015 233 aa4.46□□□□□ -1.7
VAPA-203ENST00000577539 CLN5O75503 358 aa4.46□□□□□ -1.7
VAPA-203ENST00000577539 IFNA10P01566 189 aa4.46□□□□□ -1.7
VAPA-203ENST00000577539 IGLV2-14P01704 120 aa4.46□□□□□ -1.7
VAPA-203ENST00000577539 SMIM6P0DI80 62 aa4.46□□□□□ -1.7
VAPA-203ENST00000577539 SLC25A6P12236 298 aa4.46□□□□□ -1.7
VAPA-203ENST00000577539 CEACAM1P13688 526 aa4.46□□□□□ -1.7
VAPA-203ENST00000577539 MC5RP33032 325 aa4.46□□□□□ -1.7
VAPA-203ENST00000577539 FOXF2Q12947 444 aa4.46□□□□□ -1.7
VAPA-203ENST00000577539 ZNF146Q15072 292 aa4.46□□□□□ -1.7
VAPA-203ENST00000577539 LRRC75BQ2VPJ9 315 aa4.46□□□□□ -1.7
VAPA-203ENST00000577539 SMIM21Q3B7S5 101 aa4.46□□□□□ -1.7
VAPA-203ENST00000577539 FFAR4Q5NUL3 377 aa4.46□□□□□ -1.7
VAPA-203ENST00000577539 ZNF645Q8N7E2 425 aa4.46□□□□□ -1.7
VAPA-203ENST00000577539 C9orf106Q8NAJ2 232 aa4.46□□□□□ -1.7
VAPA-203ENST00000577539 OR13A1Q8NGR1 328 aa4.46□□□□□ -1.7
VAPA-203ENST00000577539 OR4F5Q8NH21 305 aa4.46□□□□□ -1.7
VAPA-203ENST00000577539 DTD1Q8TEA8 209 aa4.46□□□□□ -1.7
VAPA-203ENST00000577539 FAM210BQ96KR6 192 aa4.46□□□□□ -1.7
VAPA-203ENST00000577539 OR4F4Q96R69 305 aa4.46□□□□□ -1.7
VAPA-203ENST00000577539 SPATA25Q9BR10 227 aa4.46□□□□□ -1.7
VAPA-203ENST00000577539 OPN3Q9H1Y3 402 aaPredicted RBP4.46□□□□□ -1.7
VAPA-203ENST00000577539 DOK5Q9P104 306 aa4.46□□□□□ -1.7
VAPA-203ENST00000577539 METTL1Q9UBP6 276 aaKnown RBP4.46□□□□□ -1.7
VAPA-203ENST00000577539 MIOXQ9UGB7 285 aa4.46□□□□□ -1.7
VAPA-203ENST00000577539 IGHV3OR15-7A0A075B7D8 119 aa4.46□□□□□ -1.7
VAPA-203ENST00000577539 IQCF6A8MYZ5 107 aa4.46□□□□□ -1.7
VAPA-203ENST00000577539 CLDN34H7C241 214 aa4.46□□□□□ -1.7
VAPA-203ENST00000577539 CECR9P0C854 216 aa4.46□□□□□ -1.7
VAPA-203ENST00000577539 GPR12P47775 334 aa4.46□□□□□ -1.7
VAPA-203ENST00000577539 ZNF83P51522 516 aa4.46□□□□□ -1.7
VAPA-203ENST00000577539 ERVK11-1P61568 191 aa4.46□□□□□ -1.7
VAPA-203ENST00000577539 SERF2P84101 59 aa4.46□□□□□ -1.7
VAPA-203ENST00000577539 ELOBQ15370 118 aa4.46□□□□□ -1.7
VAPA-203ENST00000577539 ZNF726P1Q15940 193 aa4.46□□□□□ -1.7
VAPA-203ENST00000577539 TMEM41BQ5BJD5 291 aa4.46□□□□□ -1.7
VAPA-203ENST00000577539 PRAMEF5Q5TYX0 476 aa4.46□□□□□ -1.7
VAPA-203ENST00000577539 DPPA3Q6W0C5 159 aa4.46□□□□□ -1.7
VAPA-203ENST00000577539 Q6ZT83 130 aa4.46□□□□□ -1.7
VAPA-203ENST00000577539 SSX7Q7RTT5 188 aa4.46□□□□□ -1.7
VAPA-203ENST00000577539 C1orf87Q8N0U7 546 aa4.46□□□□□ -1.7
VAPA-203ENST00000577539 DEFB108BQ8NET1 73 aa4.46□□□□□ -1.7
VAPA-203ENST00000577539 OR10G4Q8NGN3 311 aa4.46□□□□□ -1.7
VAPA-203ENST00000577539 OR10G9Q8NGN4 311 aa4.46□□□□□ -1.7
VAPA-203ENST00000577539 OR10G7Q8NGN6 311 aa4.46□□□□□ -1.7
VAPA-203ENST00000577539 PINX1Q96BK5 328 aaKnown RBP4.46□□□□□ -1.7
VAPA-203ENST00000577539 SARAFQ96BY9 339 aa4.46□□□□□ -1.7
VAPA-203ENST00000577539 TOLLIPQ9H0E2 274 aa4.46□□□□□ -1.7
VAPA-203ENST00000577539 PPP1R14DQ9NXH3 145 aa4.46□□□□□ -1.7
VAPA-203ENST00000577539 VAX2Q9UIW0 290 aa4.46□□□□□ -1.7
VAPA-203ENST00000577539 GAB2Q9UQC2 676 aa4.46□□□□□ -1.7
VAPA-203ENST00000577539 OTOGLQ3ZCN5 2332 aa4.46□□□□□ -1.7
VAPA-203ENST00000577539 GAGE10A6NGK3 116 aa4.45□□□□□ -1.7
VAPA-203ENST00000577539 TMEM210A6NLX4 147 aa4.45□□□□□ -1.7
VAPA-203ENST00000577539 LINC00587B1AMM8 73 aa4.45□□□□□ -1.7
VAPA-203ENST00000577539 M0R1X1 148 aa4.45□□□□□ -1.7
VAPA-203ENST00000577539 SOX15O60248 233 aa4.45□□□□□ -1.7
VAPA-203ENST00000577539 PSMB3P49720 205 aa4.45□□□□□ -1.7
VAPA-203ENST00000577539 UBE2G2P60604 165 aa4.45□□□□□ -1.7
VAPA-203ENST00000577539 CST9LP1Q5W188 147 aa4.45□□□□□ -1.7
VAPA-203ENST00000577539 NCR3LG1Q68D85 454 aa4.45□□□□□ -1.7
VAPA-203ENST00000577539 ACP7Q6ZNF0 438 aa4.45□□□□□ -1.7
VAPA-203ENST00000577539 SLC35E3Q7Z769 313 aa4.45□□□□□ -1.7
VAPA-203ENST00000577539 MRGPRGQ86SM5 289 aa4.45□□□□□ -1.7
VAPA-203ENST00000577539 OR10D4PQ8NGN7 298 aa4.45□□□□□ -1.7
VAPA-203ENST00000577539 COQ2Q96H96 371 aa4.45□□□□□ -1.7
VAPA-203ENST00000577539 ZNF251Q9BRH9 671 aa4.45□□□□□ -1.7
VAPA-203ENST00000577539 TMEM147Q9BVK8 224 aa4.45□□□□□ -1.7
VAPA-203ENST00000577539 ZDHHC11Q9H8X9 412 aa4.45□□□□□ -1.7
VAPA-203ENST00000577539 HEYLQ9NQ87 328 aaPredicted RBP4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms