RNA–Protein interactions for RNA: ENST00000577300.1

SMCHD1-202, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 506 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-202ENST00000577300 CROCC2H7BZ55 1655 aa2.31□□□□□ -2.04
SMCHD1-202ENST00000577300 PHIPQ8WWQ0 1821 aa2.31□□□□□ -2.04
SMCHD1-202ENST00000577300 A0A0D9SG52 128 aa2.3□□□□□ -2.04
SMCHD1-202ENST00000577300 A0A0G2JMM0 328 aa2.3□□□□□ -2.04
SMCHD1-202ENST00000577300 IGHV3-64DA0A0J9YX35 117 aa2.3□□□□□ -2.04
SMCHD1-202ENST00000577300 A0A1W2PPB8 328 aa2.3□□□□□ -2.04
SMCHD1-202ENST00000577300 DHRS12A0PJE2 317 aa2.3□□□□□ -2.04
SMCHD1-202ENST00000577300 FAM183AA6NL82 134 aa2.3□□□□□ -2.04
SMCHD1-202ENST00000577300 KIR3DP1A8MWS1 328 aa2.3□□□□□ -2.04
SMCHD1-202ENST00000577300 G3V3Q6 166 aa2.3□□□□□ -2.04
SMCHD1-202ENST00000577300 H0YJW9 148 aa2.3□□□□□ -2.04
SMCHD1-202ENST00000577300 K7N7A8 449 aa2.3□□□□□ -2.04
SMCHD1-202ENST00000577300 M0R2Z0 102 aa2.3□□□□□ -2.04
SMCHD1-202ENST00000577300 PLA2G10O15496 165 aa2.3□□□□□ -2.04
SMCHD1-202ENST00000577300 KLF8O95600 359 aaPredicted RBP2.3□□□□□ -2.04
SMCHD1-202ENST00000577300 MOSP00540 346 aa2.3□□□□□ -2.04
SMCHD1-202ENST00000577300 CD14P08571 375 aa2.3□□□□□ -2.04
SMCHD1-202ENST00000577300 GKN3PP0CG01 181 aa2.3□□□□□ -2.04
SMCHD1-202ENST00000577300 PGA3P0DJD8 388 aa2.3□□□□□ -2.04
SMCHD1-202ENST00000577300 LINC00694P0DN24 101 aa2.3□□□□□ -2.04
SMCHD1-202ENST00000577300 ZNF708P17019 499 aa2.3□□□□□ -2.04
SMCHD1-202ENST00000577300 ORM2P19652 201 aa2.3□□□□□ -2.04
SMCHD1-202ENST00000577300 CXCL2P19875 107 aa2.3□□□□□ -2.04
SMCHD1-202ENST00000577300 NTF3P20783 257 aa2.3□□□□□ -2.04
SMCHD1-202ENST00000577300 CDK2P24941 298 aa2.3□□□□□ -2.04
SMCHD1-202ENST00000577300 ATP6V0CP27449 155 aa2.3□□□□□ -2.04
SMCHD1-202ENST00000577300 LOXP28300 417 aaPredicted RBP2.3□□□□□ -2.04
SMCHD1-202ENST00000577300 IMPA1P29218 277 aa2.3□□□□□ -2.04
SMCHD1-202ENST00000577300 AQP1P29972 269 aa2.3□□□□□ -2.04
SMCHD1-202ENST00000577300 OR10J1P30954 320 aa2.3□□□□□ -2.04
SMCHD1-202ENST00000577300 GNG4P50150 75 aa2.3□□□□□ -2.04
SMCHD1-202ENST00000577300 ZNF83P51522 516 aa2.3□□□□□ -2.04
SMCHD1-202ENST00000577300 SLC18A1P54219 525 aa2.3□□□□□ -2.04
SMCHD1-202ENST00000577300 OR12D2P58182 307 aa2.3□□□□□ -2.04
SMCHD1-202ENST00000577300 UBA52P62987 128 aaKnown RBP2.3□□□□□ -2.04
SMCHD1-202ENST00000577300 ARG2P78540 354 aa2.3□□□□□ -2.04
SMCHD1-202ENST00000577300 RGNQ15493 299 aa2.3□□□□□ -2.04
SMCHD1-202ENST00000577300 MMDQ15546 238 aa2.3□□□□□ -2.04
SMCHD1-202ENST00000577300 SSX1Q16384 188 aa2.3□□□□□ -2.04
SMCHD1-202ENST00000577300 IQCJQ1A5X6 159 aa2.3□□□□□ -2.04
SMCHD1-202ENST00000577300 DMRTC1Q5HYR2 192 aa2.3□□□□□ -2.04
SMCHD1-202ENST00000577300 FAM120AOSQ5T036 256 aa2.3□□□□□ -2.04
SMCHD1-202ENST00000577300 OR10K2Q6IF99 312 aa2.3□□□□□ -2.04
SMCHD1-202ENST00000577300 EIF5AL1Q6IS14 154 aaKnown RBP2.3□□□□□ -2.04
SMCHD1-202ENST00000577300 HEPN1Q6WQI6 88 aa2.3□□□□□ -2.04
SMCHD1-202ENST00000577300 FOXI2Q6ZQN5 318 aa2.3□□□□□ -2.04
SMCHD1-202ENST00000577300 MOB3BQ86TA1 216 aa2.3□□□□□ -2.04
SMCHD1-202ENST00000577300 C20orf196Q8IYI0 205 aa2.3□□□□□ -2.04
SMCHD1-202ENST00000577300 WDR31Q8NA23 367 aa2.3□□□□□ -2.04
SMCHD1-202ENST00000577300 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.3□□□□□ -2.04
SMCHD1-202ENST00000577300 OR51G1Q8NGK1 321 aa2.3□□□□□ -2.04
SMCHD1-202ENST00000577300 OR1S2Q8NGQ3 325 aa2.3□□□□□ -2.04
SMCHD1-202ENST00000577300 THEM6Q8WUY1 208 aa2.3□□□□□ -2.04
SMCHD1-202ENST00000577300 PP6455Q8WZ26 134 aa2.3□□□□□ -2.04
SMCHD1-202ENST00000577300 NDRG1Q92597 394 aaKnown RBP2.3□□□□□ -2.04
SMCHD1-202ENST00000577300 TMEM106AQ96A25 262 aa2.3□□□□□ -2.04
SMCHD1-202ENST00000577300 UPRTQ96BW1 309 aa2.3□□□□□ -2.04
SMCHD1-202ENST00000577300 ZMYND19Q96E35 227 aaPredicted RBP2.3□□□□□ -2.04
SMCHD1-202ENST00000577300 SDSLQ96GA7 329 aa2.3□□□□□ -2.04
SMCHD1-202ENST00000577300 RNF185Q96GF1 192 aa2.3□□□□□ -2.04
SMCHD1-202ENST00000577300 ZNF681Q96N22 645 aa2.3□□□□□ -2.04
SMCHD1-202ENST00000577300 PKMYT1Q99640 499 aa2.3□□□□□ -2.04
SMCHD1-202ENST00000577300 ANAPC13Q9BS18 74 aa2.3□□□□□ -2.04
SMCHD1-202ENST00000577300 DERL1Q9BUN8 251 aa2.3□□□□□ -2.04
SMCHD1-202ENST00000577300 PLA2G2FQ9BZM2 168 aa2.3□□□□□ -2.04
SMCHD1-202ENST00000577300 OR2H1Q9GZK4 316 aa2.3□□□□□ -2.04
SMCHD1-202ENST00000577300 KCNJ16Q9NPI9 418 aa2.3□□□□□ -2.04
SMCHD1-202ENST00000577300 ACOT13Q9NPJ3 140 aa2.3□□□□□ -2.04
SMCHD1-202ENST00000577300 PRTFDC1Q9NRG1 225 aa2.3□□□□□ -2.04
SMCHD1-202ENST00000577300 CISHQ9NSE2 258 aa2.3□□□□□ -2.04
SMCHD1-202ENST00000577300 BET1LQ9NYM9 111 aa2.3□□□□□ -2.04
SMCHD1-202ENST00000577300 VAX2Q9UIW0 290 aa2.3□□□□□ -2.04
SMCHD1-202ENST00000577300 ANXA10Q9UJ72 324 aa2.3□□□□□ -2.04
SMCHD1-202ENST00000577300 POMPQ9Y244 141 aa2.3□□□□□ -2.04
SMCHD1-202ENST00000577300 HDGFL3Q9Y3E1 203 aa2.3□□□□□ -2.04
SMCHD1-202ENST00000577300 ENPP4Q9Y6X5 453 aa2.3□□□□□ -2.04
SMCHD1-202ENST00000577300 BLMP54132 1417 aaPredicted RBP2.3□□□□□ -2.04
SMCHD1-202ENST00000577300 RIC1Q4ADV7 1423 aa2.3□□□□□ -2.04
SMCHD1-202ENST00000577300 ATP10BO94823 1461 aa2.3□□□□□ -2.04
SMCHD1-202ENST00000577300 ABCA5Q8WWZ7 1642 aa2.3□□□□□ -2.04
SMCHD1-202ENST00000577300 MYO5BQ9ULV0 1848 aa2.3□□□□□ -2.04
SMCHD1-202ENST00000577300 KDM5CP41229 1560 aa2.29□□□□□ -2.04
SMCHD1-202ENST00000577300 DIP2AQ14689 1571 aa2.29□□□□□ -2.04
SMCHD1-202ENST00000577300 EPRSP07814 1512 aaKnown RBP2.29□□□□□ -2.04
SMCHD1-202ENST00000577300 ZFYVE16Q7Z3T8 1539 aa2.29□□□□□ -2.04
SMCHD1-202ENST00000577300 RGS12O14924 1447 aa2.29□□□□□ -2.04
SMCHD1-202ENST00000577300 LOC102725191A0A1B0GVB3 256 aa2.29□□□□□ -2.04
SMCHD1-202ENST00000577300 C7orf66A4D0T2 115 aa2.29□□□□□ -2.04
SMCHD1-202ENST00000577300 MCRIP1C9JLW8 97 aa2.29□□□□□ -2.04
SMCHD1-202ENST00000577300 E7EQ34 232 aa2.29□□□□□ -2.04
SMCHD1-202ENST00000577300 H3BQ15 152 aa2.29□□□□□ -2.04
SMCHD1-202ENST00000577300 J3KT08 172 aa2.29□□□□□ -2.04
SMCHD1-202ENST00000577300 TAX1BP3O14907 124 aa2.29□□□□□ -2.04
SMCHD1-202ENST00000577300 AGPAT2O15120 278 aa2.29□□□□□ -2.04
SMCHD1-202ENST00000577300 HIST1H2BKO60814 126 aa2.29□□□□□ -2.04
SMCHD1-202ENST00000577300 CLDN11O75508 207 aa2.29□□□□□ -2.04
SMCHD1-202ENST00000577300 PGLYRP1O75594 196 aaPredicted RBP2.29□□□□□ -2.04
SMCHD1-202ENST00000577300 ATP5LO75964 103 aa2.29□□□□□ -2.04
SMCHD1-202ENST00000577300 CDRT1O95170 752 aa2.29□□□□□ -2.04
SMCHD1-202ENST00000577300 CD8AP01732 235 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms