RNA–Protein interactions for RNA: ENST00000577085.1

SF3B3-215, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-215ENST00000577085 FCER2P06734 321 aa11.98□□□□□ -0.49
SF3B3-215ENST00000577085 IGKV1-13P0DP09 117 aa11.98□□□□□ -0.49
SF3B3-215ENST00000577085 ZP3P21754 424 aa11.98□□□□□ -0.49
SF3B3-215ENST00000577085 CDK10Q15131 360 aa11.98□□□□□ -0.49
SF3B3-215ENST00000577085 UBE2NLQ5JXB2 153 aa11.98□□□□□ -0.49
SF3B3-215ENST00000577085 HOGA1Q86XE5 327 aa11.98□□□□□ -0.49
SF3B3-215ENST00000577085 MMD2Q8IY49 270 aa11.98□□□□□ -0.49
SF3B3-215ENST00000577085 GVQW1Q8N7I0 195 aa11.98□□□□□ -0.49
SF3B3-215ENST00000577085 OR13F1Q8NGS4 319 aa11.98□□□□□ -0.49
SF3B3-215ENST00000577085 VSTM2AQ8TAG5 236 aa11.98□□□□□ -0.49
SF3B3-215ENST00000577085 SRSF12Q8WXF0 261 aaKnown RBP11.98□□□□□ -0.49
SF3B3-215ENST00000577085 RHOVQ96L33 236 aa11.98□□□□□ -0.49
SF3B3-215ENST00000577085 SPIN2AQ99865 258 aa11.98□□□□□ -0.49
SF3B3-215ENST00000577085 SPIN2BQ9BPZ2 258 aa11.98□□□□□ -0.49
SF3B3-215ENST00000577085 ELOVL1Q9BW60 279 aa11.98□□□□□ -0.49
SF3B3-215ENST00000577085 AUNIPQ9H7T9 357 aa11.98□□□□□ -0.49
SF3B3-215ENST00000577085 SAA1P0DJI8 122 aaPredicted RBP11.97□□□□□ -0.49
SF3B3-215ENST00000577085 TGFBR1P36897 503 aa11.97□□□□□ -0.49
SF3B3-215ENST00000577085 SSBP2P81877 361 aaPredicted RBP11.97□□□□□ -0.49
SF3B3-215ENST00000577085 VAX1Q5SQQ9 334 aa11.97□□□□□ -0.49
SF3B3-215ENST00000577085 TMEM69Q5SWH9 247 aa11.97□□□□□ -0.49
SF3B3-215ENST00000577085 ZNF66Q6ZN08 573 aa11.97□□□□□ -0.49
SF3B3-215ENST00000577085 OVCH2Q7RTZ1 564 aa11.97□□□□□ -0.49
SF3B3-215ENST00000577085 SAMD12Q8N8I0 201 aa11.97□□□□□ -0.49
SF3B3-215ENST00000577085 OR6Q1Q8NGQ2 317 aa11.97□□□□□ -0.49
SF3B3-215ENST00000577085 USMG5Q96IX5 58 aa11.97□□□□□ -0.49
SF3B3-215ENST00000577085 TINAGL1Q9GZM7 467 aaPredicted RBP11.97□□□□□ -0.49
SF3B3-215ENST00000577085 MEIS3P1A6NDR6 274 aa11.96□□□□□ -0.49
SF3B3-215ENST00000577085 TNFSF12O43508 249 aa11.96□□□□□ -0.49
SF3B3-215ENST00000577085 XRCC3O43542 346 aa11.96□□□□□ -0.49
SF3B3-215ENST00000577085 HRASP01112 189 aa11.96□□□□□ -0.49
SF3B3-215ENST00000577085 OR9G9P0C7N8 305 aa11.96□□□□□ -0.49
SF3B3-215ENST00000577085 RPS19P39019 145 aaKnown RBP11.96□□□□□ -0.49
SF3B3-215ENST00000577085 KIR2DS2P43631 304 aa11.96□□□□□ -0.49
SF3B3-215ENST00000577085 FXYD4P59646 89 aa11.96□□□□□ -0.49
SF3B3-215ENST00000577085 MFSD4AQ8N468 514 aa11.96□□□□□ -0.49
SF3B3-215ENST00000577085 YIPF6Q96EC8 236 aa11.96□□□□□ -0.49
SF3B3-215ENST00000577085 AIFM2Q9BRQ8 373 aa11.96□□□□□ -0.49
SF3B3-215ENST00000577085 RSRP1Q9BUV0 290 aa11.96□□□□□ -0.49
SF3B3-215ENST00000577085 ZNF430Q9H8G1 570 aaPredicted RBP11.96□□□□□ -0.49
SF3B3-215ENST00000577085 DPPA5A6NC42 116 aa11.95□□□□□ -0.5
SF3B3-215ENST00000577085 OR2A4O95047 310 aa11.95□□□□□ -0.5
SF3B3-215ENST00000577085 PPYP01298 95 aa11.95□□□□□ -0.5
SF3B3-215ENST00000577085 IGLV2-14P01704 120 aa11.95□□□□□ -0.5
SF3B3-215ENST00000577085 PTHLHP12272 177 aa11.95□□□□□ -0.5
SF3B3-215ENST00000577085 HERV-K104P61576 105 aa11.95□□□□□ -0.5
SF3B3-215ENST00000577085 RPL30P62888 115 aaKnown RBP11.95□□□□□ -0.5
SF3B3-215ENST00000577085 CATR1Q13166 79 aa11.95□□□□□ -0.5
SF3B3-215ENST00000577085 ACSM6Q6P461 480 aa11.95□□□□□ -0.5
SF3B3-215ENST00000577085 VKORC1L1Q8N0U8 176 aa11.95□□□□□ -0.5
SF3B3-215ENST00000577085 OR5AP2Q8NGF4 316 aa11.95□□□□□ -0.5
SF3B3-215ENST00000577085 OR2A7Q96R45 310 aa11.95□□□□□ -0.5
SF3B3-215ENST00000577085 SLC5A7Q9GZV3 580 aa11.95□□□□□ -0.5
SF3B3-215ENST00000577085 CCL28Q9NRJ3 127 aa11.95□□□□□ -0.5
SF3B3-215ENST00000577085 SMIM31A0A1B0GVY4 71 aa11.94□□□□□ -0.5
SF3B3-215ENST00000577085 BRI3O95415 125 aa11.94□□□□□ -0.5
SF3B3-215ENST00000577085 DEFA5Q01523 94 aa11.94□□□□□ -0.5
SF3B3-215ENST00000577085 MSMO1Q15800 293 aa11.94□□□□□ -0.5
SF3B3-215ENST00000577085 TATDN3Q17R31 274 aa11.94□□□□□ -0.5
SF3B3-215ENST00000577085 C11orf87Q6NUJ2 197 aa11.94□□□□□ -0.5
SF3B3-215ENST00000577085 SLC25A42Q86VD7 318 aa11.94□□□□□ -0.5
SF3B3-215ENST00000577085 ANKRD13BQ86YJ7 626 aa11.94□□□□□ -0.5
SF3B3-215ENST00000577085 ZBTB34Q8NCN2 500 aa11.94□□□□□ -0.5
SF3B3-215ENST00000577085 BORCS5Q969J3 196 aa11.94□□□□□ -0.5
SF3B3-215ENST00000577085 PEF1Q9UBV8 284 aaKnown RBP11.94□□□□□ -0.5
SF3B3-215ENST00000577085 SMAD5-AS1Q9Y6J3 95 aa11.94□□□□□ -0.5
SF3B3-215ENST00000577085 FAM223BA6NKX1 122 aa11.93□□□□□ -0.5
SF3B3-215ENST00000577085 KBTBD11O94819 623 aa11.93□□□□□ -0.5
SF3B3-215ENST00000577085 NHLRC4P0CG21 123 aaPredicted RBP11.93□□□□□ -0.5
SF3B3-215ENST00000577085 TAS2R20P59543 309 aa11.93□□□□□ -0.5
SF3B3-215ENST00000577085 ATP5G2Q06055 141 aa11.93□□□□□ -0.5
SF3B3-215ENST00000577085 MRGPRG-AS1Q2M3A8 158 aa11.93□□□□□ -0.5
SF3B3-215ENST00000577085 SSX9Q7RTT3 188 aa11.93□□□□□ -0.5
SF3B3-215ENST00000577085 TMEM17Q86X19 198 aa11.93□□□□□ -0.5
SF3B3-215ENST00000577085 FAM223AQ8IWN6 122 aa11.93□□□□□ -0.5
SF3B3-215ENST00000577085 SPAG16Q8N0X2 631 aa11.93□□□□□ -0.5
SF3B3-215ENST00000577085 ADAD2Q8NCV1 583 aaKnown RBP11.93□□□□□ -0.5
SF3B3-215ENST00000577085 SNAPC3Q92966 411 aa11.93□□□□□ -0.5
SF3B3-215ENST00000577085 SLC25A46Q96AG3 418 aa11.93□□□□□ -0.5
SF3B3-215ENST00000577085 KCTD12Q96CX2 325 aaKnown RBP11.93□□□□□ -0.5
SF3B3-215ENST00000577085 FYTTD1Q96QD9 318 aaKnown RBP11.93□□□□□ -0.5
SF3B3-215ENST00000577085 GPHA2Q96T91 129 aa11.93□□□□□ -0.5
SF3B3-215ENST00000577085 HRASLSQ9HDD0 168 aa11.93□□□□□ -0.5
SF3B3-215ENST00000577085 EHFQ9NZC4 300 aa11.93□□□□□ -0.5
SF3B3-215ENST00000577085 LSM4Q9Y4Z0 139 aaKnown RBP11.93□□□□□ -0.5
SF3B3-215ENST00000577085 SULT1C2O00338 296 aa11.92□□□□□ -0.5
SF3B3-215ENST00000577085 SPNP16150 400 aa11.92□□□□□ -0.5
SF3B3-215ENST00000577085 PRSS3P35030 304 aa11.92□□□□□ -0.5
SF3B3-215ENST00000577085 MAS1LP35410 378 aa11.92□□□□□ -0.5
SF3B3-215ENST00000577085 TAS2R46P59540 309 aa11.92□□□□□ -0.5
SF3B3-215ENST00000577085 RHOGP84095 191 aa11.92□□□□□ -0.5
SF3B3-215ENST00000577085 RPEL1Q2QD12 228 aa11.92□□□□□ -0.5
SF3B3-215ENST00000577085 AADACL3Q5VUY0 350 aa11.92□□□□□ -0.5
SF3B3-215ENST00000577085 ZNF343Q6P1L6 599 aa11.92□□□□□ -0.5
SF3B3-215ENST00000577085 OR5H2Q8NGV7 314 aa11.92□□□□□ -0.5
SF3B3-215ENST00000577085 GIMAP1Q8WWP7 306 aa11.92□□□□□ -0.5
SF3B3-215ENST00000577085 FUNDC2Q9BWH2 189 aa11.92□□□□□ -0.5
SF3B3-215ENST00000577085 COMMD3Q9UBI1 195 aa11.92□□□□□ -0.5
SF3B3-215ENST00000577085 DHFRP00374 187 aa11.91□□□□□ -0.5
SF3B3-215ENST00000577085 PRH1P02810 166 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms