RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 LGALS9O00182 355 aa7.51□□□□□ -1.21
NPLOC4-220ENST00000576940 SOCS1O15524 211 aa7.51□□□□□ -1.21
NPLOC4-220ENST00000576940 RGS10O43665 173 aa7.51□□□□□ -1.21
NPLOC4-220ENST00000576940 GGCTO75223 188 aaKnown RBP7.51□□□□□ -1.21
NPLOC4-220ENST00000576940 CDK1P06493 297 aa7.51□□□□□ -1.21
NPLOC4-220ENST00000576940 TAGLNQ01995 201 aaKnown RBP7.51□□□□□ -1.21
NPLOC4-220ENST00000576940 INSL4Q14641 139 aa7.51□□□□□ -1.21
NPLOC4-220ENST00000576940 C15orf32Q32M92 178 aa7.51□□□□□ -1.21
NPLOC4-220ENST00000576940 UBE2UQ5VVX9 321 aa7.51□□□□□ -1.21
NPLOC4-220ENST00000576940 C19orf35Q6ZS72 473 aa7.51□□□□□ -1.21
NPLOC4-220ENST00000576940 Q6ZWC4 215 aa7.51□□□□□ -1.21
NPLOC4-220ENST00000576940 GPHB5Q86YW7 130 aa7.51□□□□□ -1.21
NPLOC4-220ENST00000576940 TTC9CQ8N5M4 171 aa7.51□□□□□ -1.21
NPLOC4-220ENST00000576940 ZNF485Q8NCK3 441 aa7.51□□□□□ -1.21
NPLOC4-220ENST00000576940 C5orf30Q96GV9 206 aa7.51□□□□□ -1.21
NPLOC4-220ENST00000576940 TM2D1Q9BX74 207 aa7.51□□□□□ -1.21
NPLOC4-220ENST00000576940 TMEM59Q9BXS4 323 aa7.51□□□□□ -1.21
NPLOC4-220ENST00000576940 RIMS4Q9H426 269 aaPredicted RBP7.51□□□□□ -1.21
NPLOC4-220ENST00000576940 Q9N2K0 584 aa7.51□□□□□ -1.21
NPLOC4-220ENST00000576940 UBQLN2Q9UHD9 624 aa7.51□□□□□ -1.21
NPLOC4-220ENST00000576940 TP53TG1Q9Y2A0 90 aa7.51□□□□□ -1.21
NPLOC4-220ENST00000576940 TMEM213A2RRL7 107 aa7.5□□□□□ -1.21
NPLOC4-220ENST00000576940 HMX3A6NHT5 357 aa7.5□□□□□ -1.21
NPLOC4-220ENST00000576940 UBBP0CG47 229 aa7.5□□□□□ -1.21
NPLOC4-220ENST00000576940 MYL12AP19105 171 aa7.5□□□□□ -1.21
NPLOC4-220ENST00000576940 TMBIM6P55061 237 aa7.5□□□□□ -1.21
NPLOC4-220ENST00000576940 ANKRD55Q3KP44 614 aa7.5□□□□□ -1.21
NPLOC4-220ENST00000576940 C10orf55Q5SWW7 151 aa7.5□□□□□ -1.21
NPLOC4-220ENST00000576940 BTNL8Q6UX41 500 aa7.5□□□□□ -1.21
NPLOC4-220ENST00000576940 CLEC19AQ6UXS0 136 aa7.5□□□□□ -1.21
NPLOC4-220ENST00000576940 MOB1BQ7L9L4 216 aa7.5□□□□□ -1.21
NPLOC4-220ENST00000576940 NKAIN3Q8N8D7 197 aa7.5□□□□□ -1.21
NPLOC4-220ENST00000576940 TEX45Q8NA69 505 aa7.5□□□□□ -1.21
NPLOC4-220ENST00000576940 NECAP1Q8NC96 275 aa7.5□□□□□ -1.21
NPLOC4-220ENST00000576940 GGHQ92820 318 aa7.5□□□□□ -1.21
NPLOC4-220ENST00000576940 RNF183Q96D59 192 aa7.5□□□□□ -1.21
NPLOC4-220ENST00000576940 TMEM80Q96HE8 168 aa7.5□□□□□ -1.21
NPLOC4-220ENST00000576940 DIMT1Q9UNQ2 313 aaKnown RBP7.5□□□□□ -1.21
NPLOC4-220ENST00000576940 TMEM14DPA8MWL7 114 aa7.49□□□□□ -1.21
NPLOC4-220ENST00000576940 ATF4P18848 351 aaPredicted RBP7.49□□□□□ -1.21
NPLOC4-220ENST00000576940 CELP19835 753 aa7.49□□□□□ -1.21
NPLOC4-220ENST00000576940 ARL3P36405 182 aa7.49□□□□□ -1.21
NPLOC4-220ENST00000576940 APOC4P55056 127 aa7.49□□□□□ -1.21
NPLOC4-220ENST00000576940 TMEM50BP56557 158 aa7.49□□□□□ -1.21
NPLOC4-220ENST00000576940 NANOS2P60321 138 aaKnown RBP7.49□□□□□ -1.21
NPLOC4-220ENST00000576940 UBE2KP61086 200 aa7.49□□□□□ -1.21
NPLOC4-220ENST00000576940 QRFPP83859 136 aa7.49□□□□□ -1.21
NPLOC4-220ENST00000576940 VMA21Q3ZAQ7 101 aa7.49□□□□□ -1.21
NPLOC4-220ENST00000576940 LINC00299Q6ZSB3 139 aa7.49□□□□□ -1.21
NPLOC4-220ENST00000576940 GPR141Q7Z602 305 aa7.49□□□□□ -1.21
NPLOC4-220ENST00000576940 LRRTM1Q86UE6 522 aa7.49□□□□□ -1.21
NPLOC4-220ENST00000576940 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.49□□□□□ -1.21
NPLOC4-220ENST00000576940 BPIFB6Q8NFQ5 453 aa7.49□□□□□ -1.21
NPLOC4-220ENST00000576940 LPAR5Q9H1C0 372 aa7.49□□□□□ -1.21
NPLOC4-220ENST00000576940 OR2D2Q9H210 308 aa7.49□□□□□ -1.21
NPLOC4-220ENST00000576940 ZNF430Q9H8G1 570 aaPredicted RBP7.49□□□□□ -1.21
NPLOC4-220ENST00000576940 ACOT13Q9NPJ3 140 aa7.49□□□□□ -1.21
NPLOC4-220ENST00000576940 PTTG2Q9NZH5 202 aa7.49□□□□□ -1.21
NPLOC4-220ENST00000576940 FBXL7Q9UJT9 491 aa7.49□□□□□ -1.21
NPLOC4-220ENST00000576940 PKD1P98161 4303 aa7.49□□□□□ -1.21
NPLOC4-220ENST00000576940 TRDCB7Z8K6 153 aa7.48□□□□□ -1.21
NPLOC4-220ENST00000576940 E7EUB6 86 aa7.48□□□□□ -1.21
NPLOC4-220ENST00000576940 BET1O15155 118 aa7.48□□□□□ -1.21
NPLOC4-220ENST00000576940 CRYZL1O95825 349 aa7.48□□□□□ -1.21
NPLOC4-220ENST00000576940 CTRB1P17538 263 aa7.48□□□□□ -1.21
NPLOC4-220ENST00000576940 RPL35AP18077 110 aaKnown RBP7.48□□□□□ -1.21
NPLOC4-220ENST00000576940 CBX3Q13185 183 aa7.48□□□□□ -1.21
NPLOC4-220ENST00000576940 RTL8BQ17RB0 113 aa7.48□□□□□ -1.21
NPLOC4-220ENST00000576940 FAM106AQ4KMX7 169 aa7.48□□□□□ -1.21
NPLOC4-220ENST00000576940 ZNF585BQ52M93 769 aa7.48□□□□□ -1.21
NPLOC4-220ENST00000576940 IGSF11Q5DX21 431 aa7.48□□□□□ -1.21
NPLOC4-220ENST00000576940 C1orf100Q5SVJ3 147 aa7.48□□□□□ -1.21
NPLOC4-220ENST00000576940 GLT8D1Q68CQ7 371 aa7.48□□□□□ -1.21
NPLOC4-220ENST00000576940 CTRB2Q6GPI1 263 aa7.48□□□□□ -1.21
NPLOC4-220ENST00000576940 UNQ9165/PRO28630Q6UXU0 137 aa7.48□□□□□ -1.21
NPLOC4-220ENST00000576940 RBPMS2Q6ZRY4 209 aaKnown RBP7.48□□□□□ -1.21
NPLOC4-220ENST00000576940 CEACAM19Q7Z692 300 aa7.48□□□□□ -1.21
NPLOC4-220ENST00000576940 OR2C3Q8N628 320 aa7.48□□□□□ -1.21
NPLOC4-220ENST00000576940 STPG3Q8N7X2 389 aa7.48□□□□□ -1.21
NPLOC4-220ENST00000576940 OR1L6Q8NGR2 347 aa7.48□□□□□ -1.21
NPLOC4-220ENST00000576940 RAB2BQ8WUD1 216 aa7.48□□□□□ -1.21
NPLOC4-220ENST00000576940 ARHGAP5-AS1Q96IT6 56 aa7.48□□□□□ -1.21
NPLOC4-220ENST00000576940 CCDC140Q96MF4 163 aa7.48□□□□□ -1.21
NPLOC4-220ENST00000576940 SPIN2AQ99865 258 aa7.48□□□□□ -1.21
NPLOC4-220ENST00000576940 SPIN2BQ9BPZ2 258 aa7.48□□□□□ -1.21
NPLOC4-220ENST00000576940 MGAT4AQ9UM21 535 aa7.48□□□□□ -1.21
NPLOC4-220ENST00000576940 LINC00473A8K010 186 aa7.47□□□□□ -1.21
NPLOC4-220ENST00000576940 FOXI3A8MTJ6 420 aaPredicted RBP7.47□□□□□ -1.21
NPLOC4-220ENST00000576940 UBE2CO00762 179 aa7.47□□□□□ -1.21
NPLOC4-220ENST00000576940 ACTL6BO94805 426 aa7.47□□□□□ -1.21
NPLOC4-220ENST00000576940 GABARAPO95166 117 aa7.47□□□□□ -1.21
NPLOC4-220ENST00000576940 GSTT2P0CG29 244 aa7.47□□□□□ -1.21
NPLOC4-220ENST00000576940 GSTT2BP0CG30 244 aa7.47□□□□□ -1.21
NPLOC4-220ENST00000576940 RRASP10301 218 aa7.47□□□□□ -1.21
NPLOC4-220ENST00000576940 SRMP19623 302 aa7.47□□□□□ -1.21
NPLOC4-220ENST00000576940 FCGR2BP31994 310 aaPredicted RBP7.47□□□□□ -1.21
NPLOC4-220ENST00000576940 DUTP33316 252 aaKnown RBP7.47□□□□□ -1.21
NPLOC4-220ENST00000576940 ST3GAL4Q11206 333 aa7.47□□□□□ -1.21
NPLOC4-220ENST00000576940 ACSM3Q53FZ2 586 aa7.47□□□□□ -1.21
NPLOC4-220ENST00000576940 FAM209BQ5JX69 171 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms