RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 CSMD3Q7Z407 3707 aa6.7□□□□□ -1.34
SMG6-216ENST00000575176 A0A1W2PN81 502 aa6.7□□□□□ -1.34
SMG6-216ENST00000575176 RBFOX2O43251 390 aaKnown RBP eCLIP6.7□□□□□ -1.34
SMG6-216ENST00000575176 TNFSF12O43508 249 aa6.7□□□□□ -1.34
SMG6-216ENST00000575176 FCGR3BO75015 233 aa6.7□□□□□ -1.34
SMG6-216ENST00000575176 PF4V1P10720 104 aa6.7□□□□□ -1.34
SMG6-216ENST00000575176 MYOD1P15172 320 aa6.7□□□□□ -1.34
SMG6-216ENST00000575176 PRSS3P35030 304 aa6.7□□□□□ -1.34
SMG6-216ENST00000575176 CHRNA7P36544 502 aa6.7□□□□□ -1.34
SMG6-216ENST00000575176 RPL5P46777 297 aaKnown RBP6.7□□□□□ -1.34
SMG6-216ENST00000575176 LGALS7P47929 136 aa6.7□□□□□ -1.34
SMG6-216ENST00000575176 RAB9AP51151 201 aa6.7□□□□□ -1.34
SMG6-216ENST00000575176 ARPC4P59998 168 aa6.7□□□□□ -1.34
SMG6-216ENST00000575176 RPS16P62249 146 aaKnown RBP6.7□□□□□ -1.34
SMG6-216ENST00000575176 DGCR2P98153 550 aa6.7□□□□□ -1.34
SMG6-216ENST00000575176 TAGLNQ01995 201 aaKnown RBP6.7□□□□□ -1.34
SMG6-216ENST00000575176 RTL8BQ17RB0 113 aa6.7□□□□□ -1.34
SMG6-216ENST00000575176 ZNF585BQ52M93 769 aa6.7□□□□□ -1.34
SMG6-216ENST00000575176 CXorf66Q5JRM2 361 aaPredicted RBP6.7□□□□□ -1.34
SMG6-216ENST00000575176 KHDC1LQ5JSQ8 128 aa6.7□□□□□ -1.34
SMG6-216ENST00000575176 VAX1Q5SQQ9 334 aa6.7□□□□□ -1.34
SMG6-216ENST00000575176 FOXB2Q5VYV0 432 aa6.7□□□□□ -1.34
SMG6-216ENST00000575176 ZNF66Q6ZN08 573 aa6.7□□□□□ -1.34
SMG6-216ENST00000575176 SNX29P2Q8IUI4 249 aa6.7□□□□□ -1.34
SMG6-216ENST00000575176 MFSD4AQ8N468 514 aa6.7□□□□□ -1.34
SMG6-216ENST00000575176 TCTEX1D1Q8N7M0 179 aa6.7□□□□□ -1.34
SMG6-216ENST00000575176 TEX45Q8NA69 505 aa6.7□□□□□ -1.34
SMG6-216ENST00000575176 ADAD2Q8NCV1 583 aaKnown RBP6.7□□□□□ -1.34
SMG6-216ENST00000575176 OR4D10Q8NGI6 311 aa6.7□□□□□ -1.34
SMG6-216ENST00000575176 OR52I2Q8NH67 350 aa6.7□□□□□ -1.34
SMG6-216ENST00000575176 SECTM1Q8WVN6 248 aa6.7□□□□□ -1.34
SMG6-216ENST00000575176 CLCC1Q96S66 551 aa6.7□□□□□ -1.34
SMG6-216ENST00000575176 AURKAIP1Q9NWT8 199 aaPredicted RBP6.7□□□□□ -1.34
SMG6-216ENST00000575176 EHFQ9NZC4 300 aa6.7□□□□□ -1.34
SMG6-216ENST00000575176 EXTL2Q9UBQ6 330 aa6.7□□□□□ -1.34
SMG6-216ENST00000575176 KLK11Q9UBX7 282 aa6.7□□□□□ -1.34
SMG6-216ENST00000575176 KMT2CQ8NEZ4 4911 aaKnown RBP6.7□□□□□ -1.34
SMG6-216ENST00000575176 TRAV3A0A0B4J244 114 aa6.69□□□□□ -1.34
SMG6-216ENST00000575176 CCL24O00175 119 aa6.69□□□□□ -1.34
SMG6-216ENST00000575176 SULT1C2O00338 296 aa6.69□□□□□ -1.34
SMG6-216ENST00000575176 SHOXO15266 292 aa6.69□□□□□ -1.34
SMG6-216ENST00000575176 SLC22A5O76082 557 aa6.69□□□□□ -1.34
SMG6-216ENST00000575176 TPPPO94811 219 aa6.69□□□□□ -1.34
SMG6-216ENST00000575176 KBTBD11O94819 623 aa6.69□□□□□ -1.34
SMG6-216ENST00000575176 S1PR2O95136 353 aa6.69□□□□□ -1.34
SMG6-216ENST00000575176 IGKV1-39P01597 117 aa6.69□□□□□ -1.34
SMG6-216ENST00000575176 PMP2P02689 132 aa6.69□□□□□ -1.34
SMG6-216ENST00000575176 CD74P04233 296 aa6.69□□□□□ -1.34
SMG6-216ENST00000575176 IGKV1D-39P04432 117 aa6.69□□□□□ -1.34
SMG6-216ENST00000575176 LGALS1P09382 135 aaKnown RBP6.69□□□□□ -1.34
SMG6-216ENST00000575176 ZNF735P0CB33 412 aa6.69□□□□□ -1.34
SMG6-216ENST00000575176 RRASP10301 218 aa6.69□□□□□ -1.34
SMG6-216ENST00000575176 HLA-DMAP28067 261 aa6.69□□□□□ -1.34
SMG6-216ENST00000575176 RCVRNP35243 200 aa6.69□□□□□ -1.34
SMG6-216ENST00000575176 MYCNOSP40205 109 aa6.69□□□□□ -1.34
SMG6-216ENST00000575176 TAS2R46P59540 309 aa6.69□□□□□ -1.34
SMG6-216ENST00000575176 FXYD4P59646 89 aa6.69□□□□□ -1.34
SMG6-216ENST00000575176 FXYD3Q14802 87 aa6.69□□□□□ -1.34
SMG6-216ENST00000575176 TMEM17Q86X19 198 aa6.69□□□□□ -1.34
SMG6-216ENST00000575176 OR4S2Q8NH73 311 aa6.69□□□□□ -1.34
SMG6-216ENST00000575176 GRPEL2Q8TAA5 225 aa6.69□□□□□ -1.34
SMG6-216ENST00000575176 TMEM167AQ8TBQ9 72 aa6.69□□□□□ -1.34
SMG6-216ENST00000575176 SRSF12Q8WXF0 261 aaKnown RBP6.69□□□□□ -1.34
SMG6-216ENST00000575176 RCC1LQ96I51 464 aaKnown RBP6.69□□□□□ -1.34
SMG6-216ENST00000575176 ZNF414Q96IQ9 312 aa6.69□□□□□ -1.34
SMG6-216ENST00000575176 RHOVQ96L33 236 aa6.69□□□□□ -1.34
SMG6-216ENST00000575176 ZNF2Q9BSG1 426 aaPredicted RBP6.69□□□□□ -1.34
SMG6-216ENST00000575176 GON7Q9BXV9 100 aa6.69□□□□□ -1.34
SMG6-216ENST00000575176 TINAGL1Q9GZM7 467 aaPredicted RBP6.69□□□□□ -1.34
SMG6-216ENST00000575176 MTFP1Q9UDX5 166 aa6.69□□□□□ -1.34
SMG6-216ENST00000575176 DMRT1Q9Y5R6 373 aa6.69□□□□□ -1.34
SMG6-216ENST00000575176 A3GALT2U3KPV4 340 aa6.69□□□□□ -1.34
SMG6-216ENST00000575176 IGHV4OR15-8A0A075B7B6 117 aa6.68□□□□□ -1.34
SMG6-216ENST00000575176 A0A087WW49 117 aa6.68□□□□□ -1.34
SMG6-216ENST00000575176 TRBV9A0A0B4J1U6 114 aa6.68□□□□□ -1.34
SMG6-216ENST00000575176 K7EIL1 84 aa6.68□□□□□ -1.34
SMG6-216ENST00000575176 M0QYG6 137 aa6.68□□□□□ -1.34
SMG6-216ENST00000575176 PF4P02776 101 aa6.68□□□□□ -1.34
SMG6-216ENST00000575176 P0C879 139 aa6.68□□□□□ -1.34
SMG6-216ENST00000575176 ACTBL2Q562R1 376 aa6.68□□□□□ -1.34
SMG6-216ENST00000575176 OR4A47Q6IF82 309 aa6.68□□□□□ -1.34
SMG6-216ENST00000575176 UNQ5815/PRO19632Q6UWF5 114 aa6.68□□□□□ -1.34
SMG6-216ENST00000575176 POC5Q8NA72 575 aa6.68□□□□□ -1.34
SMG6-216ENST00000575176 ZBTB34Q8NCN2 500 aa6.68□□□□□ -1.34
SMG6-216ENST00000575176 OR5M8Q8NGP6 311 aa6.68□□□□□ -1.34
SMG6-216ENST00000575176 SMIM4Q8WVI0 70 aa6.68□□□□□ -1.34
SMG6-216ENST00000575176 TCTEX1D2Q8WW35 142 aa6.68□□□□□ -1.34
SMG6-216ENST00000575176 AP3S1Q92572 193 aa6.68□□□□□ -1.34
SMG6-216ENST00000575176 TRIM63Q969Q1 353 aa6.68□□□□□ -1.34
SMG6-216ENST00000575176 RSRP1Q9BUV0 290 aa6.68□□□□□ -1.34
SMG6-216ENST00000575176 SLC5A7Q9GZV3 580 aa6.68□□□□□ -1.34
SMG6-216ENST00000575176 IFT46Q9NQC8 304 aa6.68□□□□□ -1.34
SMG6-216ENST00000575176 BET1LQ9NYM9 111 aa6.68□□□□□ -1.34
SMG6-216ENST00000575176 SCOCQ9UIL1 159 aa6.68□□□□□ -1.34
SMG6-216ENST00000575176 VSIG4Q9Y279 399 aa6.68□□□□□ -1.34
SMG6-216ENST00000575176 V9GYH0 126 aa6.68□□□□□ -1.34
SMG6-216ENST00000575176 WI2-2373I1.2A0A1W2PRP0 233 aa6.67□□□□□ -1.34
SMG6-216ENST00000575176 DBX1A6NMT0 343 aa6.67□□□□□ -1.34
SMG6-216ENST00000575176 NUDT19A8MXV4 375 aa6.67□□□□□ -1.34
SMG6-216ENST00000575176 H3BUA1 57 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms