RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 DMRTC2Q8IXT2 367 aaPredicted RBP13.01□□□□□ -0.33
NUP88-207ENST00000573584 GBGT1Q8N5D6 347 aa13.01□□□□□ -0.33
NUP88-207ENST00000573584 SDSLQ96GA7 329 aa13.01□□□□□ -0.33
NUP88-207ENST00000573584 FZR1Q9UM11 496 aa13.01□□□□□ -0.33
NUP88-207ENST00000573584 KNTC1P50748 2209 aa13.01□□□□□ -0.33
NUP88-207ENST00000573584 TMEM144Q7Z5S9 345 aa13.01□□□□□ -0.33
NUP88-207ENST00000573584 ZNF114Q8NC26 417 aa13.01□□□□□ -0.33
NUP88-207ENST00000573584 FER1L6-AS2Q96M78 137 aa13.01□□□□□ -0.33
NUP88-207ENST00000573584 WFIKKN1Q96NZ8 548 aa13.01□□□□□ -0.33
NUP88-207ENST00000573584 ZNF891A8MT65 544 aaPredicted RBP13□□□□□ -0.33
NUP88-207ENST00000573584 F6UZH7 168 aa13□□□□□ -0.33
NUP88-207ENST00000573584 AGFG2O95081 481 aa13□□□□□ -0.33
NUP88-207ENST00000573584 TNFSF15O95150 251 aa13□□□□□ -0.33
NUP88-207ENST00000573584 GPR12P47775 334 aa13□□□□□ -0.33
NUP88-207ENST00000573584 FOXL1Q12952 345 aa13□□□□□ -0.33
NUP88-207ENST00000573584 EDDM3AQ14507 147 aa13□□□□□ -0.33
NUP88-207ENST00000573584 OR4A16Q8NH70 328 aa13□□□□□ -0.33
NUP88-207ENST00000573584 SGMS2Q8NHU3 365 aa13□□□□□ -0.33
NUP88-207ENST00000573584 PRO3102Q9H379 93 aa13□□□□□ -0.33
NUP88-207ENST00000573584 MSL2Q9HCI7 577 aa13□□□□□ -0.33
NUP88-207ENST00000573584 IFNL4K9M1U5 179 aa13□□□□□ -0.33
NUP88-207ENST00000573584 TIMM8AO60220 97 aaPredicted RBP13□□□□□ -0.33
NUP88-207ENST00000573584 MPDU1O75352 247 aa13□□□□□ -0.33
NUP88-207ENST00000573584 DUTP33316 252 aaKnown RBP13□□□□□ -0.33
NUP88-207ENST00000573584 RPP30P78346 268 aaKnown RBP13□□□□□ -0.33
NUP88-207ENST00000573584 PAX5Q02548 391 aa13□□□□□ -0.33
NUP88-207ENST00000573584 SSX2Q16385 188 aa13□□□□□ -0.33
NUP88-207ENST00000573584 IQCJQ1A5X6 159 aa13□□□□□ -0.33
NUP88-207ENST00000573584 SMIM21Q3B7S5 101 aa13□□□□□ -0.33
NUP88-207ENST00000573584 PDLIM3Q53GG5 364 aaPredicted RBP13□□□□□ -0.33
NUP88-207ENST00000573584 PRAMEF5Q5TYX0 476 aa13□□□□□ -0.33
NUP88-207ENST00000573584 SFRP2Q96HF1 295 aa13□□□□□ -0.33
NUP88-207ENST00000573584 BTF3L4Q96K17 158 aa13□□□□□ -0.33
NUP88-207ENST00000573584 IMMP2LQ96T52 175 aa13□□□□□ -0.33
NUP88-207ENST00000573584 CDX2Q99626 313 aaPredicted RBP13□□□□□ -0.33
NUP88-207ENST00000573584 HEYLQ9NQ87 328 aaPredicted RBP13□□□□□ -0.33
NUP88-207ENST00000573584 PROP1O75360 226 aa12.99□□□□□ -0.33
NUP88-207ENST00000573584 ADH4P08319 380 aa12.99□□□□□ -0.33
NUP88-207ENST00000573584 OR4A8P0C604 315 aa12.99□□□□□ -0.33
NUP88-207ENST00000573584 ARL14EPLP0DKL9 152 aa12.99□□□□□ -0.33
NUP88-207ENST00000573584 FABP6P51161 128 aa12.99□□□□□ -0.33
NUP88-207ENST00000573584 SPCS3P61009 180 aa12.99□□□□□ -0.33
NUP88-207ENST00000573584 TREML4Q6UXN2 200 aa12.99□□□□□ -0.33
NUP88-207ENST00000573584 BEND2Q8NDZ0 799 aa12.99□□□□□ -0.33
NUP88-207ENST00000573584 TMEM204Q9BSN7 226 aa12.99□□□□□ -0.33
NUP88-207ENST00000573584 PXMP4Q9Y6I8 212 aa12.99□□□□□ -0.33
NUP88-207ENST00000573584 C15orf65H3BRN8 121 aa12.99□□□□□ -0.33
NUP88-207ENST00000573584 RRHO14718 337 aa12.99□□□□□ -0.33
NUP88-207ENST00000573584 RBFOX2O43251 390 aaKnown RBP eCLIP12.99□□□□□ -0.33
NUP88-207ENST00000573584 WISP2O76076 250 aa12.99□□□□□ -0.33
NUP88-207ENST00000573584 HPRT1P00492 218 aa12.99□□□□□ -0.33
NUP88-207ENST00000573584 OPRK1P41145 380 aa12.99□□□□□ -0.33
NUP88-207ENST00000573584 HTD2P86397 168 aa12.99□□□□□ -0.33
NUP88-207ENST00000573584 VKORC1L1Q8N0U8 176 aa12.99□□□□□ -0.33
NUP88-207ENST00000573584 FAM234AQ9H0X4 552 aa12.99□□□□□ -0.33
NUP88-207ENST00000573584 ARRDC1-AS1Q9H2J1 176 aa12.99□□□□□ -0.33
NUP88-207ENST00000573584 SOX15O60248 233 aa12.99□□□□□ -0.33
NUP88-207ENST00000573584 ZNF883P0CG24 379 aa12.99□□□□□ -0.33
NUP88-207ENST00000573584 ATP1A1-AS1Q5TC04 95 aa12.99□□□□□ -0.33
NUP88-207ENST00000573584 Q6ZT83 130 aa12.99□□□□□ -0.33
NUP88-207ENST00000573584 TMPRSS7Q7RTY8 843 aa12.99□□□□□ -0.33
NUP88-207ENST00000573584 ZDHHC11Q9H8X9 412 aa12.99□□□□□ -0.33
NUP88-207ENST00000573584 GNG12Q9UBI6 72 aa12.99□□□□□ -0.33
NUP88-207ENST00000573584 TRBV20OR9-2A0A075B6H5 130 aa12.98□□□□□ -0.33
NUP88-207ENST00000573584 SCGB1D1O95968 90 aa12.98□□□□□ -0.33
NUP88-207ENST00000573584 AARDQ4LEZ3 155 aa12.98□□□□□ -0.33
NUP88-207ENST00000573584 MIC13Q5XKP0 118 aa12.98□□□□□ -0.33
NUP88-207ENST00000573584 TMEM256Q8N2U0 113 aa12.98□□□□□ -0.33
NUP88-207ENST00000573584 CD177Q8N6Q3 437 aa12.98□□□□□ -0.33
NUP88-207ENST00000573584 MS4A5Q9H3V2 200 aa12.98□□□□□ -0.33
NUP88-207ENST00000573584 ELOVL5Q9NYP7 299 aa12.98□□□□□ -0.33
NUP88-207ENST00000573584 TP53TG5Q9Y2B4 290 aa12.98□□□□□ -0.33
NUP88-207ENST00000573584 MDFIC2A0A1B0GVS7 189 aa12.98□□□□□ -0.33
NUP88-207ENST00000573584 HOXC12P31275 282 aa12.98□□□□□ -0.33
NUP88-207ENST00000573584 FAM214BQ7L5A3 538 aa12.98□□□□□ -0.33
NUP88-207ENST00000573584 CNEP1R1Q8N9A8 125 aa12.98□□□□□ -0.33
NUP88-207ENST00000573584 MGST2Q99735 147 aa12.98□□□□□ -0.33
NUP88-207ENST00000573584 FKBP11Q9NYL4 201 aa12.98□□□□□ -0.33
NUP88-207ENST00000573584 A0A1B0GUS0 222 aa12.97□□□□□ -0.33
NUP88-207ENST00000573584 C19orf67A6NJJ6 358 aa12.97□□□□□ -0.33
NUP88-207ENST00000573584 STAG3L2P0CL84 134 aa12.97□□□□□ -0.33
NUP88-207ENST00000573584 STAG3L3P0CL85 134 aa12.97□□□□□ -0.33
NUP88-207ENST00000573584 KITLGP21583 273 aa12.97□□□□□ -0.33
NUP88-207ENST00000573584 GCH1P30793 250 aa12.97□□□□□ -0.33
NUP88-207ENST00000573584 SOX8P57073 446 aa12.97□□□□□ -0.33
NUP88-207ENST00000573584 ABHD12Q8N2K0 398 aa12.97□□□□□ -0.33
NUP88-207ENST00000573584 M0R1X1 148 aa12.97□□□□□ -0.33
NUP88-207ENST00000573584 CXorf1O96002 111 aa12.97□□□□□ -0.33
NUP88-207ENST00000573584 IGKV3-15P01624 115 aa12.97□□□□□ -0.33
NUP88-207ENST00000573584 HNF1AP20823 631 aa12.97□□□□□ -0.33
NUP88-207ENST00000573584 PRDX2P32119 198 aa12.97□□□□□ -0.33
NUP88-207ENST00000573584 TRAT1Q6PIZ9 186 aa12.97□□□□□ -0.33
NUP88-207ENST00000573584 TCF23Q7RTU1 214 aa12.97□□□□□ -0.33
NUP88-207ENST00000573584 LRRC29Q8WV35 223 aa12.97□□□□□ -0.33
NUP88-207ENST00000573584 TRIB1Q96RU8 372 aa12.97□□□□□ -0.33
NUP88-207ENST00000573584 TXNDC17Q9BRA2 123 aa12.97□□□□□ -0.33
NUP88-207ENST00000573584 GGTLC1Q9BX51 225 aa12.97□□□□□ -0.33
NUP88-207ENST00000573584 SCO2A0A1W2PP80 73 aa12.96□□□□□ -0.33
NUP88-207ENST00000573584 FAM90A9PA6NNJ1 464 aa12.96□□□□□ -0.33
NUP88-207ENST00000573584 IGHV3-13P01766 116 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms