RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 H1FOOQ8IZA3 346 aaPredicted RBP5.78□□□□□ -1.48
NUP88-205ENST00000572809 TCTEX1D1Q8N7M0 179 aa5.78□□□□□ -1.48
NUP88-205ENST00000572809 OR5M8Q8NGP6 311 aa5.78□□□□□ -1.48
NUP88-205ENST00000572809 ABHD5Q8WTS1 349 aa5.78□□□□□ -1.48
NUP88-205ENST00000572809 OR2D2Q9H210 308 aa5.78□□□□□ -1.48
NUP88-205ENST00000572809 DCSTAMPQ9H295 470 aa5.78□□□□□ -1.48
NUP88-205ENST00000572809 RNF167Q9H6Y7 350 aa5.78□□□□□ -1.48
NUP88-205ENST00000572809 SLC35D1Q9NTN3 355 aa5.78□□□□□ -1.48
NUP88-205ENST00000572809 ZMAT5Q9UDW3 170 aaKnown RBP5.78□□□□□ -1.48
NUP88-205ENST00000572809 VSIG4Q9Y279 399 aa5.78□□□□□ -1.48
NUP88-205ENST00000572809 FBXO7Q9Y3I1 522 aa5.78□□□□□ -1.48
NUP88-205ENST00000572809 A3GALT2U3KPV4 340 aa5.78□□□□□ -1.48
NUP88-205ENST00000572809 I3L521 148 aa5.77□□□□□ -1.49
NUP88-205ENST00000572809 J3QRK9 145 aa5.77□□□□□ -1.49
NUP88-205ENST00000572809 K7EIL1 84 aa5.77□□□□□ -1.49
NUP88-205ENST00000572809 SLC25A17O43808 307 aa5.77□□□□□ -1.49
NUP88-205ENST00000572809 SOX15O60248 233 aa5.77□□□□□ -1.49
NUP88-205ENST00000572809 SPDEFO95238 335 aa5.77□□□□□ -1.49
NUP88-205ENST00000572809 CNIH1O95406 144 aa5.77□□□□□ -1.49
NUP88-205ENST00000572809 CA2P00918 260 aa5.77□□□□□ -1.49
NUP88-205ENST00000572809 RRASP10301 218 aa5.77□□□□□ -1.49
NUP88-205ENST00000572809 CD40LGP29965 261 aa5.77□□□□□ -1.49
NUP88-205ENST00000572809 LUMP51884 338 aaPredicted RBP5.77□□□□□ -1.49
NUP88-205ENST00000572809 GNG2P59768 71 aa5.77□□□□□ -1.49
NUP88-205ENST00000572809 NDPQ00604 133 aa5.77□□□□□ -1.49
NUP88-205ENST00000572809 RUNX1Q01196 453 aa5.77□□□□□ -1.49
NUP88-205ENST00000572809 CBX3Q13185 183 aa5.77□□□□□ -1.49
NUP88-205ENST00000572809 FXYD3Q14802 87 aa5.77□□□□□ -1.49
NUP88-205ENST00000572809 C4orf46Q504U0 113 aa5.77□□□□□ -1.49
NUP88-205ENST00000572809 ACTBL2Q562R1 376 aa5.77□□□□□ -1.49
NUP88-205ENST00000572809 C9orf66Q5T8R8 295 aa5.77□□□□□ -1.49
NUP88-205ENST00000572809 CNIH2Q6PI25 160 aa5.77□□□□□ -1.49
NUP88-205ENST00000572809 UNQ5815/PRO19632Q6UWF5 114 aa5.77□□□□□ -1.49
NUP88-205ENST00000572809 SYT8Q8NBV8 401 aa5.77□□□□□ -1.49
NUP88-205ENST00000572809 LFNGQ8NES3 379 aa5.77□□□□□ -1.49
NUP88-205ENST00000572809 OR1N2Q8NGR9 330 aa5.77□□□□□ -1.49
NUP88-205ENST00000572809 OR5H6Q8NGV6 325 aa5.77□□□□□ -1.49
NUP88-205ENST00000572809 LGALS14Q8TCE9 139 aa5.77□□□□□ -1.49
NUP88-205ENST00000572809 MYOZ3Q8TDC0 251 aa5.77□□□□□ -1.49
NUP88-205ENST00000572809 OR5B12Q96R08 314 aa5.77□□□□□ -1.49
NUP88-205ENST00000572809 FAM103A1Q9BTL3 118 aaKnown RBP5.77□□□□□ -1.49
NUP88-205ENST00000572809 GNB4Q9HAV0 340 aa5.77□□□□□ -1.49
NUP88-205ENST00000572809 RHBDL2Q9NX52 303 aa5.77□□□□□ -1.49
NUP88-205ENST00000572809 FOXA2Q9Y261 457 aaPredicted RBP5.77□□□□□ -1.49
NUP88-205ENST00000572809 TRAV18A0A075B6X5 111 aa5.76□□□□□ -1.49
NUP88-205ENST00000572809 A0A087WXM4 84 aa5.76□□□□□ -1.49
NUP88-205ENST00000572809 WI2-2373I1.2A0A1W2PRP0 233 aa5.76□□□□□ -1.49
NUP88-205ENST00000572809 TMEM235A6NFC5 223 aa5.76□□□□□ -1.49
NUP88-205ENST00000572809 SRRM4A7MD48 611 aaKnown RBP5.76□□□□□ -1.49
NUP88-205ENST00000572809 SSX5O60225 188 aa5.76□□□□□ -1.49
NUP88-205ENST00000572809 RAMP3O60896 148 aa5.76□□□□□ -1.49
NUP88-205ENST00000572809 IGLV2-23P01705 113 aa5.76□□□□□ -1.49
NUP88-205ENST00000572809 CRYGBP07316 175 aa5.76□□□□□ -1.49
NUP88-205ENST00000572809 OR8U8P0C7N1 319 aa5.76□□□□□ -1.49
NUP88-205ENST00000572809 NFYAP23511 347 aaPredicted RBP5.76□□□□□ -1.49
NUP88-205ENST00000572809 DUTP33316 252 aaKnown RBP5.76□□□□□ -1.49
NUP88-205ENST00000572809 DGCR2P98153 550 aa5.76□□□□□ -1.49
NUP88-205ENST00000572809 ZNF616Q08AN1 781 aa5.76□□□□□ -1.49
NUP88-205ENST00000572809 FHL3Q13643 280 aa5.76□□□□□ -1.49
NUP88-205ENST00000572809 RTL8BQ17RB0 113 aa5.76□□□□□ -1.49
NUP88-205ENST00000572809 TIMM50Q3ZCQ8 353 aa5.76□□□□□ -1.49
NUP88-205ENST00000572809 PYHIN1Q6K0P9 492 aa5.76□□□□□ -1.49
NUP88-205ENST00000572809 TSPAN14Q8NG11 270 aa5.76□□□□□ -1.49
NUP88-205ENST00000572809 CASTOR1Q8WTX7 329 aa5.76□□□□□ -1.49
NUP88-205ENST00000572809 NUDCD2Q8WVJ2 157 aa5.76□□□□□ -1.49
NUP88-205ENST00000572809 ARPC1AQ92747 370 aa5.76□□□□□ -1.49
NUP88-205ENST00000572809 C5orf30Q96GV9 206 aa5.76□□□□□ -1.49
NUP88-205ENST00000572809 ADTRPQ96IZ2 230 aa5.76□□□□□ -1.49
NUP88-205ENST00000572809 MS4A10Q96PG2 267 aa5.76□□□□□ -1.49
NUP88-205ENST00000572809 DIABLOQ9NR28 239 aa5.76□□□□□ -1.49
NUP88-205ENST00000572809 OR2W1Q9Y3N9 320 aa5.76□□□□□ -1.49
NUP88-205ENST00000572809 ETV7Q9Y603 341 aa5.76□□□□□ -1.49
NUP88-205ENST00000572809 A0A0A6YYH2 397 aa5.75□□□□□ -1.49
NUP88-205ENST00000572809 A6NJ64 397 aa5.75□□□□□ -1.49
NUP88-205ENST00000572809 LINC00473A8K010 186 aa5.75□□□□□ -1.49
NUP88-205ENST00000572809 ZNF785A8K8V0 405 aa5.75□□□□□ -1.49
NUP88-205ENST00000572809 SEC14L6B5MCN3 397 aa5.75□□□□□ -1.49
NUP88-205ENST00000572809 ARPC1BO15143 372 aaKnown RBP5.75□□□□□ -1.49
NUP88-205ENST00000572809 AIREO43918 545 aa5.75□□□□□ -1.49
NUP88-205ENST00000572809 SLC22A5O76082 557 aa5.75□□□□□ -1.49
NUP88-205ENST00000572809 TNFAIP8O95379 198 aa5.75□□□□□ -1.49
NUP88-205ENST00000572809 HLA-DQB1P01920 261 aa5.75□□□□□ -1.49
NUP88-205ENST00000572809 GNB1P62873 340 aa5.75□□□□□ -1.49
NUP88-205ENST00000572809 PJVKQ0ZLH3 352 aa5.75□□□□□ -1.49
NUP88-205ENST00000572809 CROCCP3Q8IVE0 287 aa5.75□□□□□ -1.49
NUP88-205ENST00000572809 ZNF645Q8N7E2 425 aa5.75□□□□□ -1.49
NUP88-205ENST00000572809 TEX45Q8NA69 505 aa5.75□□□□□ -1.49
NUP88-205ENST00000572809 OR5T1Q8NG75 326 aa5.75□□□□□ -1.49
NUP88-205ENST00000572809 GRPEL2Q8TAA5 225 aa5.75□□□□□ -1.49
NUP88-205ENST00000572809 ST8SIA2Q92186 375 aa5.75□□□□□ -1.49
NUP88-205ENST00000572809 DDB2Q92466 427 aa5.75□□□□□ -1.49
NUP88-205ENST00000572809 DCUN1D4Q92564 292 aa5.75□□□□□ -1.49
NUP88-205ENST00000572809 TRIM63Q969Q1 353 aa5.75□□□□□ -1.49
NUP88-205ENST00000572809 S100A16Q96FQ6 103 aaKnown RBP5.75□□□□□ -1.49
NUP88-205ENST00000572809 HARBI1Q96MB7 349 aa5.75□□□□□ -1.49
NUP88-205ENST00000572809 TMEM68Q96MH6 324 aa5.75□□□□□ -1.49
NUP88-205ENST00000572809 DCUN1D5Q9BTE7 237 aa5.75□□□□□ -1.49
NUP88-205ENST00000572809 ALX4Q9H161 411 aaPredicted RBP5.75□□□□□ -1.49
NUP88-205ENST00000572809 SLA2Q9H6Q3 261 aa5.75□□□□□ -1.49
NUP88-205ENST00000572809 VCX3AQ9NNX9 186 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms