RNA–Protein interactions for RNA: ENST00000572043.5

CTDNEP1-207, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDNEP1, Length 857 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-207ENST00000572043 DLX4Q92988 240 aaPredicted RBP13.74□□□□□ -0.21
CTDNEP1-207ENST00000572043 SLC25A46Q96AG3 418 aa13.74□□□□□ -0.21
CTDNEP1-207ENST00000572043 SLA2Q9H6Q3 261 aa13.74□□□□□ -0.21
CTDNEP1-207ENST00000572043 COA4Q9NYJ1 87 aa13.74□□□□□ -0.21
CTDNEP1-207ENST00000572043 COMMD3Q9UBI1 195 aa13.74□□□□□ -0.21
CTDNEP1-207ENST00000572043 NOTCH3Q9UM47 2321 aa13.73□□□□□ -0.21
CTDNEP1-207ENST00000572043 TRIM64CA6NLI5 447 aa13.73□□□□□ -0.21
CTDNEP1-207ENST00000572043 MPPED1O15442 326 aa13.73□□□□□ -0.21
CTDNEP1-207ENST00000572043 PPYP01298 95 aa13.73□□□□□ -0.21
CTDNEP1-207ENST00000572043 CBX5P45973 191 aa13.73□□□□□ -0.21
CTDNEP1-207ENST00000572043 C10orf55Q5SWW7 151 aa13.73□□□□□ -0.21
CTDNEP1-207ENST00000572043 MFSD4AQ8N468 514 aa13.73□□□□□ -0.21
CTDNEP1-207ENST00000572043 SRSF12Q8WXF0 261 aaKnown RBP13.73□□□□□ -0.21
CTDNEP1-207ENST00000572043 RHOVQ96L33 236 aa13.73□□□□□ -0.21
CTDNEP1-207ENST00000572043 HSD17B10Q99714 261 aaKnown RBP13.73□□□□□ -0.21
CTDNEP1-207ENST00000572043 ZNF430Q9H8G1 570 aaPredicted RBP13.73□□□□□ -0.21
CTDNEP1-207ENST00000572043 C13orf42A0A1B0GVH6 325 aa13.72□□□□□ -0.21
CTDNEP1-207ENST00000572043 ANKRD34BA5PLL1 514 aa13.72□□□□□ -0.21
CTDNEP1-207ENST00000572043 RAMP3O60896 148 aa13.72□□□□□ -0.21
CTDNEP1-207ENST00000572043 SAP30O75446 220 aa13.72□□□□□ -0.21
CTDNEP1-207ENST00000572043 ACTL6BO94805 426 aa13.72□□□□□ -0.21
CTDNEP1-207ENST00000572043 HSPB1P04792 205 aaKnown RBP13.72□□□□□ -0.21
CTDNEP1-207ENST00000572043 EIF4EP06730 217 aaKnown RBP13.72□□□□□ -0.21
CTDNEP1-207ENST00000572043 EIF4EBP1Q13541 118 aaPredicted RBP13.72□□□□□ -0.21
CTDNEP1-207ENST00000572043 CDK10Q15131 360 aa13.72□□□□□ -0.21
CTDNEP1-207ENST00000572043 OVCH2Q7RTZ1 564 aa13.72□□□□□ -0.21
CTDNEP1-207ENST00000572043 TMEM17Q86X19 198 aa13.72□□□□□ -0.21
CTDNEP1-207ENST00000572043 OR4S2Q8NH73 311 aa13.72□□□□□ -0.21
CTDNEP1-207ENST00000572043 SLC5A7Q9GZV3 580 aa13.72□□□□□ -0.21
CTDNEP1-207ENST00000572043 NAA50Q9GZZ1 169 aaKnown RBP13.72□□□□□ -0.21
CTDNEP1-207ENST00000572043 ZMAT5Q9UDW3 170 aaKnown RBP13.72□□□□□ -0.21
CTDNEP1-207ENST00000572043 LY86O95711 162 aa13.71□□□□□ -0.21
CTDNEP1-207ENST00000572043 PMP2P02689 132 aa13.71□□□□□ -0.21
CTDNEP1-207ENST00000572043 SMIM18P0DKX4 95 aa13.71□□□□□ -0.21
CTDNEP1-207ENST00000572043 BRWD1-AS2P59051 145 aa13.71□□□□□ -0.21
CTDNEP1-207ENST00000572043 ZNF66Q6ZN08 573 aa13.71□□□□□ -0.21
CTDNEP1-207ENST00000572043 SSX9Q7RTT3 188 aa13.71□□□□□ -0.21
CTDNEP1-207ENST00000572043 OR5AP2Q8NGF4 316 aa13.71□□□□□ -0.21
CTDNEP1-207ENST00000572043 EHFQ9NZC4 300 aa13.71□□□□□ -0.21
CTDNEP1-207ENST00000572043 H3BUA1 57 aa13.7□□□□□ -0.22
CTDNEP1-207ENST00000572043 PRH1P02810 166 aa13.7□□□□□ -0.22
CTDNEP1-207ENST00000572043 RFX2P48378 723 aa13.7□□□□□ -0.22
CTDNEP1-207ENST00000572043 TMEM68Q96MH6 324 aa13.7□□□□□ -0.22
CTDNEP1-207ENST00000572043 A0A0G2JLM5 398 aa13.69□□□□□ -0.22
CTDNEP1-207ENST00000572043 SULT1C2O00338 296 aa13.69□□□□□ -0.22
CTDNEP1-207ENST00000572043 CREBL2O60519 120 aaPredicted RBP13.69□□□□□ -0.22
CTDNEP1-207ENST00000572043 OR2A4O95047 310 aa13.69□□□□□ -0.22
CTDNEP1-207ENST00000572043 PRSS3P35030 304 aa13.69□□□□□ -0.22
CTDNEP1-207ENST00000572043 HERV-K104P61576 105 aa13.69□□□□□ -0.22
CTDNEP1-207ENST00000572043 CD69Q07108 199 aa13.69□□□□□ -0.22
CTDNEP1-207ENST00000572043 MMD2Q8IY49 270 aa13.69□□□□□ -0.22
CTDNEP1-207ENST00000572043 ADAD2Q8NCV1 583 aaKnown RBP13.69□□□□□ -0.22
CTDNEP1-207ENST00000572043 KCTD12Q96CX2 325 aaKnown RBP13.69□□□□□ -0.22
CTDNEP1-207ENST00000572043 OR2A7Q96R45 310 aa13.69□□□□□ -0.22
CTDNEP1-207ENST00000572043 TINAGL1Q9GZM7 467 aaPredicted RBP13.69□□□□□ -0.22
CTDNEP1-207ENST00000572043 HMX3A6NHT5 357 aa13.68□□□□□ -0.22
CTDNEP1-207ENST00000572043 HPGDSO60760 199 aa13.68□□□□□ -0.22
CTDNEP1-207ENST00000572043 RBMXL2O75526 392 aaKnown RBP13.68□□□□□ -0.22
CTDNEP1-207ENST00000572043 OR9G9P0C7N8 305 aa13.68□□□□□ -0.22
CTDNEP1-207ENST00000572043 DYRK1AQ13627 763 aa13.68□□□□□ -0.22
CTDNEP1-207ENST00000572043 GPR107Q5VW38 600 aa13.68□□□□□ -0.22
CTDNEP1-207ENST00000572043 ZNF818PQ6ZRF7 136 aa13.68□□□□□ -0.22
CTDNEP1-207ENST00000572043 HAPLN4Q86UW8 402 aa13.68□□□□□ -0.22
CTDNEP1-207ENST00000572043 SNX29P2Q8IUI4 249 aa13.68□□□□□ -0.22
CTDNEP1-207ENST00000572043 SPAG16Q8N0X2 631 aa13.68□□□□□ -0.22
CTDNEP1-207ENST00000572043 OR5H2Q8NGV7 314 aa13.68□□□□□ -0.22
CTDNEP1-207ENST00000572043 OR51H1Q8NH63 302 aa13.68□□□□□ -0.22
CTDNEP1-207ENST00000572043 GIMAP1Q8WWP7 306 aa13.68□□□□□ -0.22
CTDNEP1-207ENST00000572043 FYTTD1Q96QD9 318 aaKnown RBP13.68□□□□□ -0.22
CTDNEP1-207ENST00000572043 ZNF2Q9BSG1 426 aaPredicted RBP13.68□□□□□ -0.22
CTDNEP1-207ENST00000572043 RANGRFQ9HD47 186 aaPredicted RBP13.68□□□□□ -0.22
CTDNEP1-207ENST00000572043 ZNF256Q9Y2P7 627 aaPredicted RBP13.68□□□□□ -0.22
CTDNEP1-207ENST00000572043 SMIM31A0A1B0GVY4 71 aa13.67□□□□□ -0.22
CTDNEP1-207ENST00000572043 KBTBD11O94819 623 aa13.67□□□□□ -0.22
CTDNEP1-207ENST00000572043 TRBV12-3P01733 135 aa13.67□□□□□ -0.22
CTDNEP1-207ENST00000572043 MYOD1P15172 320 aa13.67□□□□□ -0.22
CTDNEP1-207ENST00000572043 HLA-DMAP28067 261 aa13.67□□□□□ -0.22
CTDNEP1-207ENST00000572043 KIR2DS2P43631 304 aa13.67□□□□□ -0.22
CTDNEP1-207ENST00000572043 RORCP51449 518 aa13.67□□□□□ -0.22
CTDNEP1-207ENST00000572043 INSL3P51460 131 aa13.67□□□□□ -0.22
CTDNEP1-207ENST00000572043 AADACL3Q5VUY0 350 aa13.67□□□□□ -0.22
CTDNEP1-207ENST00000572043 C11orf87Q6NUJ2 197 aa13.67□□□□□ -0.22
CTDNEP1-207ENST00000572043 C19orf35Q6ZS72 473 aa13.67□□□□□ -0.22
CTDNEP1-207ENST00000572043 ZNF429Q86V71 674 aa13.67□□□□□ -0.22
CTDNEP1-207ENST00000572043 ZBTB34Q8NCN2 500 aa13.67□□□□□ -0.22
CTDNEP1-207ENST00000572043 VSTM2AQ8TAG5 236 aa13.67□□□□□ -0.22
CTDNEP1-207ENST00000572043 SPIN2AQ99865 258 aa13.67□□□□□ -0.22
CTDNEP1-207ENST00000572043 SPIN2BQ9BPZ2 258 aa13.67□□□□□ -0.22
CTDNEP1-207ENST00000572043 RSRP1Q9BUV0 290 aa13.67□□□□□ -0.22
CTDNEP1-207ENST00000572043 ANAPC10Q9UM13 185 aa13.67□□□□□ -0.22
CTDNEP1-207ENST00000572043 DNAH3Q8TD57 4116 aa13.66□□□□□ -0.22
CTDNEP1-207ENST00000572043 ELK1P19419 428 aa13.66□□□□□ -0.22
CTDNEP1-207ENST00000572043 RHOGP84095 191 aa13.66□□□□□ -0.22
CTDNEP1-207ENST00000572043 ZNF45Q02386 682 aa13.66□□□□□ -0.22
CTDNEP1-207ENST00000572043 CATR1Q13166 79 aa13.66□□□□□ -0.22
CTDNEP1-207ENST00000572043 MSMO1Q15800 293 aa13.66□□□□□ -0.22
CTDNEP1-207ENST00000572043 RNASE12Q5GAN4 147 aaKnown RBP13.66□□□□□ -0.22
CTDNEP1-207ENST00000572043 ACSM6Q6P461 480 aa13.66□□□□□ -0.22
CTDNEP1-207ENST00000572043 PUSL1Q8N0Z8 303 aaKnown RBP13.66□□□□□ -0.22
CTDNEP1-207ENST00000572043 OR4C12Q96R67 309 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms