RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 IGHV1-8P0DP01 117 aa2.98□□□□□ -1.93
NUP88-202ENST00000570937 CALCBP10092 127 aa2.98□□□□□ -1.93
NUP88-202ENST00000570937 IGFBP3P17936 291 aaPredicted RBP2.98□□□□□ -1.93
NUP88-202ENST00000570937 SERPINA2P20848 420 aa2.98□□□□□ -1.93
NUP88-202ENST00000570937 GALP22466 123 aa2.98□□□□□ -1.93
NUP88-202ENST00000570937 HTR2CP28335 458 aa2.98□□□□□ -1.93
NUP88-202ENST00000570937 CEACAM3P40198 252 aa2.98□□□□□ -1.93
NUP88-202ENST00000570937 IER3P46695 156 aa2.98□□□□□ -1.93
NUP88-202ENST00000570937 CEBPDP49716 269 aaPredicted RBP2.98□□□□□ -1.93
NUP88-202ENST00000570937 SNU13P55769 128 aaKnown RBP2.98□□□□□ -1.93
NUP88-202ENST00000570937 RBM11P57052 281 aaKnown RBP2.98□□□□□ -1.93
NUP88-202ENST00000570937 RPS11P62280 158 aaKnown RBP eCLIP2.98□□□□□ -1.93
NUP88-202ENST00000570937 UBA52P62987 128 aaKnown RBP2.98□□□□□ -1.93
NUP88-202ENST00000570937 PAX5Q02548 391 aa2.98□□□□□ -1.93
NUP88-202ENST00000570937 TPBGQ13641 420 aa2.98□□□□□ -1.93
NUP88-202ENST00000570937 SPCS2Q15005 226 aa2.98□□□□□ -1.93
NUP88-202ENST00000570937 SLC9A3R2Q15599 337 aa2.98□□□□□ -1.93
NUP88-202ENST00000570937 AANATQ16613 207 aa2.98□□□□□ -1.93
NUP88-202ENST00000570937 DEFB112Q30KQ8 113 aa2.98□□□□□ -1.93
NUP88-202ENST00000570937 SLC22A6Q4U2R8 563 aa2.98□□□□□ -1.93
NUP88-202ENST00000570937 PAN3Q58A45 887 aaKnown RBP2.98□□□□□ -1.93
NUP88-202ENST00000570937 NHLRC3Q5JS37 347 aa2.98□□□□□ -1.93
NUP88-202ENST00000570937 MUC21Q5SSG8 566 aa2.98□□□□□ -1.93
NUP88-202ENST00000570937 ATAD3CQ5T2N8 411 aa2.98□□□□□ -1.93
NUP88-202ENST00000570937 LIPKQ5VXJ0 399 aa2.98□□□□□ -1.93
NUP88-202ENST00000570937 LAIR2Q6ISS4 152 aa2.98□□□□□ -1.93
NUP88-202ENST00000570937 DUX4L9Q6RFH8 374 aaPredicted RBP2.98□□□□□ -1.93
NUP88-202ENST00000570937 GLIPR1L1Q6UWM5 242 aa2.98□□□□□ -1.93
NUP88-202ENST00000570937 HEPN1Q6WQI6 88 aa2.98□□□□□ -1.93
NUP88-202ENST00000570937 C17orf107Q6ZR85 190 aa2.98□□□□□ -1.93
NUP88-202ENST00000570937 PDZD9Q8IXQ8 264 aa2.98□□□□□ -1.93
NUP88-202ENST00000570937 SLC7A5P1Q8MH63 180 aa2.98□□□□□ -1.93
NUP88-202ENST00000570937 OSR2Q8N2R0 312 aa2.98□□□□□ -1.93
NUP88-202ENST00000570937 Q8N7P7 452 aa2.98□□□□□ -1.93
NUP88-202ENST00000570937 LINC00469Q8N7U9 141 aa2.98□□□□□ -1.93
NUP88-202ENST00000570937 ZFP41Q8N8Y5 198 aa2.98□□□□□ -1.93
NUP88-202ENST00000570937 ZDHHC22Q8N966 263 aa2.98□□□□□ -1.93
NUP88-202ENST00000570937 OR4S1Q8NGB4 309 aa2.98□□□□□ -1.93
NUP88-202ENST00000570937 OR11H6Q8NGC7 330 aa2.98□□□□□ -1.93
NUP88-202ENST00000570937 OR10A7Q8NGE5 316 aa2.98□□□□□ -1.93
NUP88-202ENST00000570937 OR51T1Q8NGJ9 327 aa2.98□□□□□ -1.93
NUP88-202ENST00000570937 OR6F1Q8NGZ6 308 aa2.98□□□□□ -1.93
NUP88-202ENST00000570937 OR4F5Q8NH21 305 aa2.98□□□□□ -1.93
NUP88-202ENST00000570937 KCNG3Q8TAE7 436 aa2.98□□□□□ -1.93
NUP88-202ENST00000570937 ZNF596Q8TC21 504 aa2.98□□□□□ -1.93
NUP88-202ENST00000570937 NEK7Q8TDX7 302 aa2.98□□□□□ -1.93
NUP88-202ENST00000570937 RGP1Q92546 391 aaPredicted RBP2.98□□□□□ -1.93
NUP88-202ENST00000570937 CORO2AQ92828 525 aa2.98□□□□□ -1.93
NUP88-202ENST00000570937 TMEM203Q969S6 136 aa2.98□□□□□ -1.93
NUP88-202ENST00000570937 MALSU1Q96EH3 234 aa2.98□□□□□ -1.93
NUP88-202ENST00000570937 PGLYRP3Q96LB9 341 aa2.98□□□□□ -1.93
NUP88-202ENST00000570937 MGLLQ99685 303 aa2.98□□□□□ -1.93
NUP88-202ENST00000570937 CHST6Q9GZX3 395 aa2.98□□□□□ -1.93
NUP88-202ENST00000570937 PPA2Q9H2U2 334 aa2.98□□□□□ -1.93
NUP88-202ENST00000570937 PLGRKTQ9HBL7 147 aa2.98□□□□□ -1.93
NUP88-202ENST00000570937 SIRT7Q9NRC8 400 aa2.98□□□□□ -1.93
NUP88-202ENST00000570937 ABCB10Q9NRK6 738 aa2.98□□□□□ -1.93
NUP88-202ENST00000570937 TAS2R3Q9NYW6 316 aa2.98□□□□□ -1.93
NUP88-202ENST00000570937 DUX4Q9UBX2 424 aa2.98□□□□□ -1.93
NUP88-202ENST00000570937 TBL2Q9Y4P3 447 aaKnown RBP2.98□□□□□ -1.93
NUP88-202ENST00000570937 LRRC42Q9Y546 428 aa2.98□□□□□ -1.93
NUP88-202ENST00000570937 NAV3Q8IVL0 2385 aa2.98□□□□□ -1.93
NUP88-202ENST00000570937 JMJD1CQ15652 2540 aa2.98□□□□□ -1.93
NUP88-202ENST00000570937 SONP18583 2426 aaKnown RBP2.98□□□□□ -1.93
NUP88-202ENST00000570937 TRAV8-7A0A075B6U6 113 aa2.97□□□□□ -1.93
NUP88-202ENST00000570937 MEIKINA0A087WXM9 373 aa2.97□□□□□ -1.93
NUP88-202ENST00000570937 LINC00854A0A1B0GVQ3 168 aa2.97□□□□□ -1.93
NUP88-202ENST00000570937 TMEM30CPA0ZSE6 113 aa2.97□□□□□ -1.93
NUP88-202ENST00000570937 LEUTXA8MZ59 168 aa2.97□□□□□ -1.93
NUP88-202ENST00000570937 CCRL2O00421 344 aa2.97□□□□□ -1.93
NUP88-202ENST00000570937 GEMIN2O14893 280 aaKnown RBP2.97□□□□□ -1.93
NUP88-202ENST00000570937 FCN3O75636 299 aa2.97□□□□□ -1.93
NUP88-202ENST00000570937 B3GALNT1O75752 331 aa2.97□□□□□ -1.93
NUP88-202ENST00000570937 CLPXO76031 633 aa2.97□□□□□ -1.93
NUP88-202ENST00000570937 TFF1P04155 84 aa2.97□□□□□ -1.93
NUP88-202ENST00000570937 UCHL1P09936 223 aa2.97□□□□□ -1.93
NUP88-202ENST00000570937 MGMTP16455 207 aa2.97□□□□□ -1.93
NUP88-202ENST00000570937 CCL3L1P16619 93 aa2.97□□□□□ -1.93
NUP88-202ENST00000570937 FUT3P21217 361 aa2.97□□□□□ -1.93
NUP88-202ENST00000570937 COX7A1P24310 79 aa2.97□□□□□ -1.93
NUP88-202ENST00000570937 MYL9P24844 172 aa2.97□□□□□ -1.93
NUP88-202ENST00000570937 CDK2P24941 298 aa2.97□□□□□ -1.93
NUP88-202ENST00000570937 NFYBP25208 207 aa2.97□□□□□ -1.93
NUP88-202ENST00000570937 HTR1DP28221 377 aa2.97□□□□□ -1.93
NUP88-202ENST00000570937 BRS3P32247 399 aa2.97□□□□□ -1.93
NUP88-202ENST00000570937 SAA4P35542 130 aa2.97□□□□□ -1.93
NUP88-202ENST00000570937 OR3A4PP47883 348 aa2.97□□□□□ -1.93
NUP88-202ENST00000570937 KRTAP12-2P59991 146 aa2.97□□□□□ -1.93
NUP88-202ENST00000570937 MRPS15P82914 257 aaKnown RBP2.97□□□□□ -1.93
NUP88-202ENST00000570937 EMX1Q04741 257 aaPredicted RBP2.97□□□□□ -1.93
NUP88-202ENST00000570937 AESQ08117 197 aa2.97□□□□□ -1.93
NUP88-202ENST00000570937 ATXN7L3Q14CW9 347 aaPredicted RBP2.97□□□□□ -1.93
NUP88-202ENST00000570937 TAF9Q16594 264 aa2.97□□□□□ -1.93
NUP88-202ENST00000570937 LRRC75BQ2VPJ9 315 aa2.97□□□□□ -1.93
NUP88-202ENST00000570937 PIGYQ3MUY2 71 aa2.97□□□□□ -1.93
NUP88-202ENST00000570937 RNF212Q495C1 297 aa2.97□□□□□ -1.93
NUP88-202ENST00000570937 ZNF506Q5JVG8 444 aa2.97□□□□□ -1.93
NUP88-202ENST00000570937 C6orf183Q5T699 404 aa2.97□□□□□ -1.93
NUP88-202ENST00000570937 MINOS1Q5TGZ0 78 aa2.97□□□□□ -1.93
NUP88-202ENST00000570937 LEMD1Q68G75 181 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms