RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 AMTP48728 403 aa12.91□□□□□ -0.34
SMG6-207ENST00000570756 HTD2P86397 168 aa12.91□□□□□ -0.34
SMG6-207ENST00000570756 ZXDAP98168 799 aa12.91□□□□□ -0.34
SMG6-207ENST00000570756 COX19Q49B96 90 aa12.91□□□□□ -0.34
SMG6-207ENST00000570756 KRTCAP3Q53RY4 240 aa12.91□□□□□ -0.34
SMG6-207ENST00000570756 STPG4Q8N801 248 aa12.91□□□□□ -0.34
SMG6-207ENST00000570756 Q8N976 141 aa12.91□□□□□ -0.34
SMG6-207ENST00000570756 KCNIP1Q9NZI2 227 aa12.91□□□□□ -0.34
SMG6-207ENST00000570756 A0A096LPE4 126 aa12.9□□□□□ -0.34
SMG6-207ENST00000570756 A0A1W2PPZ6 126 aa12.9□□□□□ -0.34
SMG6-207ENST00000570756 F2Z2F3 143 aa12.9□□□□□ -0.34
SMG6-207ENST00000570756 SLC17A3O00476 420 aa12.9□□□□□ -0.34
SMG6-207ENST00000570756 OR2H2O95918 312 aa12.9□□□□□ -0.34
SMG6-207ENST00000570756 IGLC2P0DOY2 106 aa12.9□□□□□ -0.34
SMG6-207ENST00000570756 IGLC3P0DOY3 106 aa12.9□□□□□ -0.34
SMG6-207ENST00000570756 COX6A1P12074 109 aa12.9□□□□□ -0.34
SMG6-207ENST00000570756 MMD2Q8IY49 270 aa12.9□□□□□ -0.34
SMG6-207ENST00000570756 Q8IYB0 196 aa12.9□□□□□ -0.34
SMG6-207ENST00000570756 UBALD2Q8IYN6 164 aa12.9□□□□□ -0.34
SMG6-207ENST00000570756 KCNS1Q96KK3 526 aa12.9□□□□□ -0.34
SMG6-207ENST00000570756 AKIRIN1Q9H9L7 192 aaPredicted RBP12.9□□□□□ -0.34
SMG6-207ENST00000570756 GNB4Q9HAV0 340 aa12.9□□□□□ -0.34
SMG6-207ENST00000570756 NRN1Q9NPD7 142 aa12.9□□□□□ -0.34
SMG6-207ENST00000570756 DIDO1Q9BTC0 2240 aaKnown RBP12.9□□□□□ -0.34
SMG6-207ENST00000570756 C9JCJ5 164 aa12.9□□□□□ -0.34
SMG6-207ENST00000570756 ITGB1BP1O14713 200 aa12.9□□□□□ -0.34
SMG6-207ENST00000570756 HYPMO75409 117 aa12.9□□□□□ -0.34
SMG6-207ENST00000570756 RHBDL1O75783 438 aa12.9□□□□□ -0.34
SMG6-207ENST00000570756 NDUFB8O95169 186 aa12.9□□□□□ -0.34
SMG6-207ENST00000570756 P04436 131 aa12.9□□□□□ -0.34
SMG6-207ENST00000570756 RPP30P78346 268 aaKnown RBP12.9□□□□□ -0.34
SMG6-207ENST00000570756 PDLIM3Q53GG5 364 aaPredicted RBP12.9□□□□□ -0.34
SMG6-207ENST00000570756 MCEMP1Q8IX19 187 aa12.9□□□□□ -0.34
SMG6-207ENST00000570756 TAAR6Q96RI8 345 aa12.9□□□□□ -0.34
SMG6-207ENST00000570756 SFXN3Q9BWM7 321 aa12.9□□□□□ -0.34
SMG6-207ENST00000570756 LINC00470Q9BZP3 86 aa12.9□□□□□ -0.34
SMG6-207ENST00000570756 IGHV5-10-1A0A0J9YXX1 117 aa12.89□□□□□ -0.35
SMG6-207ENST00000570756 C15orf62A8K5M9 175 aa12.89□□□□□ -0.35
SMG6-207ENST00000570756 NGFP01138 241 aa12.89□□□□□ -0.35
SMG6-207ENST00000570756 DCAF12Q5T6F0 453 aa12.89□□□□□ -0.35
SMG6-207ENST00000570756 NKX6-3A6NJ46 265 aa12.89□□□□□ -0.35
SMG6-207ENST00000570756 MT-CO2P00403 227 aa12.89□□□□□ -0.35
SMG6-207ENST00000570756 RBX1P62877 108 aa12.89□□□□□ -0.35
SMG6-207ENST00000570756 RPL30P62888 115 aaKnown RBP12.89□□□□□ -0.35
SMG6-207ENST00000570756 RPL31P62899 125 aaKnown RBP12.89□□□□□ -0.35
SMG6-207ENST00000570756 ZNF808Q8N4W9 903 aaPredicted RBP12.89□□□□□ -0.35
SMG6-207ENST00000570756 GALMQ96C23 342 aa12.89□□□□□ -0.35
SMG6-207ENST00000570756 UHRF2Q96PU4 802 aa12.89□□□□□ -0.35
SMG6-207ENST00000570756 PRRG4Q9BZD6 226 aa12.89□□□□□ -0.35
SMG6-207ENST00000570756 NAT8BQ9UHF3 227 aa12.89□□□□□ -0.35
SMG6-207ENST00000570756 SIT1Q9Y3P8 196 aa12.89□□□□□ -0.35
SMG6-207ENST00000570756 K7EN84 100 aa12.88□□□□□ -0.35
SMG6-207ENST00000570756 ZNHIT1O43257 154 aa12.88□□□□□ -0.35
SMG6-207ENST00000570756 REG1AP05451 166 aa12.88□□□□□ -0.35
SMG6-207ENST00000570756 ARR3P36575 388 aa12.88□□□□□ -0.35
SMG6-207ENST00000570756 C9orf135Q5VTT2 229 aa12.88□□□□□ -0.35
SMG6-207ENST00000570756 WDR31Q8NA23 367 aa12.88□□□□□ -0.35
SMG6-207ENST00000570756 CCL25O15444 150 aa12.88□□□□□ -0.35
SMG6-207ENST00000570756 NEURL1O76050 574 aa12.88□□□□□ -0.35
SMG6-207ENST00000570756 PLP2Q04941 152 aa12.88□□□□□ -0.35
SMG6-207ENST00000570756 PSG7Q13046 419 aa12.88□□□□□ -0.35
SMG6-207ENST00000570756 EIF4EBP1Q13541 118 aaPredicted RBP12.88□□□□□ -0.35
SMG6-207ENST00000570756 ZNF718Q3SXZ3 478 aa12.88□□□□□ -0.35
SMG6-207ENST00000570756 SPINK9Q5DT21 86 aa12.88□□□□□ -0.35
SMG6-207ENST00000570756 C11orf52Q96A22 123 aa12.88□□□□□ -0.35
SMG6-207ENST00000570756 TUBG2Q9NRH3 451 aa12.88□□□□□ -0.35
SMG6-207ENST00000570756 MRPS17Q9Y2R5 130 aaKnown RBP12.88□□□□□ -0.35
SMG6-207ENST00000570756 POLDIP2Q9Y2S7 368 aa12.88□□□□□ -0.35
SMG6-207ENST00000570756 RNF114Q9Y508 228 aa12.88□□□□□ -0.35
SMG6-207ENST00000570756 TRGV10A0A0A0MS01 117 aa12.87□□□□□ -0.35
SMG6-207ENST00000570756 C17orf98A8MV24 154 aa12.87□□□□□ -0.35
SMG6-207ENST00000570756 SH2D1BO14796 132 aa12.87□□□□□ -0.35
SMG6-207ENST00000570756 IGHEP01854 428 aa12.87□□□□□ -0.35
SMG6-207ENST00000570756 SPINK2P20155 84 aa12.87□□□□□ -0.35
SMG6-207ENST00000570756 UBE2V1Q13404 147 aa12.87□□□□□ -0.35
SMG6-207ENST00000570756 WIPI1Q5MNZ9 446 aaPredicted RBP12.87□□□□□ -0.35
SMG6-207ENST00000570756 OR2D3Q8NGH3 330 aa12.87□□□□□ -0.35
SMG6-207ENST00000570756 RNASE8Q8TDE3 154 aaKnown RBP12.87□□□□□ -0.35
SMG6-207ENST00000570756 NINJ1Q92982 152 aa12.87□□□□□ -0.35
SMG6-207ENST00000570756 APH1AQ96BI3 265 aa12.87□□□□□ -0.35
SMG6-207ENST00000570756 POM121L2Q96KW2 1035 aa12.87□□□□□ -0.35
SMG6-207ENST00000570756 A0A0G2JMM0 328 aa12.87□□□□□ -0.35
SMG6-207ENST00000570756 A0A1W2PPB8 328 aa12.87□□□□□ -0.35
SMG6-207ENST00000570756 A0A1W2PQM1 296 aa12.87□□□□□ -0.35
SMG6-207ENST00000570756 A0A1W2PRS3 328 aa12.87□□□□□ -0.35
SMG6-207ENST00000570756 DPRXA6NFQ7 191 aa12.87□□□□□ -0.35
SMG6-207ENST00000570756 KIR3DP1A8MWS1 328 aa12.87□□□□□ -0.35
SMG6-207ENST00000570756 C3orf80F5H4A9 247 aa12.87□□□□□ -0.35
SMG6-207ENST00000570756 K7EP13 123 aa12.87□□□□□ -0.35
SMG6-207ENST00000570756 PMCHP20382 165 aa12.87□□□□□ -0.35
SMG6-207ENST00000570756 CA6P23280 308 aa12.87□□□□□ -0.35
SMG6-207ENST00000570756 C19orf35Q6ZS72 473 aa12.87□□□□□ -0.35
SMG6-207ENST00000570756 OR8I2Q8N0Y5 310 aa12.87□□□□□ -0.35
SMG6-207ENST00000570756 ZNF738Q8NE65 137 aa12.87□□□□□ -0.35
SMG6-207ENST00000570756 OR2M7Q8NG81 312 aa12.87□□□□□ -0.35
SMG6-207ENST00000570756 EAF1Q96JC9 268 aaPredicted RBP12.87□□□□□ -0.35
SMG6-207ENST00000570756 RTL8AQ9BWD3 113 aa12.87□□□□□ -0.35
SMG6-207ENST00000570756 BET1LQ9NYM9 111 aa12.87□□□□□ -0.35
SMG6-207ENST00000570756 MRPS16Q9Y3D3 137 aaKnown RBP12.87□□□□□ -0.35
SMG6-207ENST00000570756 PPIAL4AQ9Y536 164 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms