RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 KIAA0141Q14154 515 aaPredicted RBP10.77□□□□□ -0.69
HERPUD1-218ENST00000569569 BEAN1Q3B7T3 259 aa10.77□□□□□ -0.69
HERPUD1-218ENST00000569569 OR2B11Q5JQS5 317 aa10.77□□□□□ -0.69
HERPUD1-218ENST00000569569 PYHIN1Q6K0P9 492 aa10.77□□□□□ -0.69
HERPUD1-218ENST00000569569 TMEM17Q86X19 198 aa10.77□□□□□ -0.69
HERPUD1-218ENST00000569569 MRPL41Q8IXM3 137 aaKnown RBP10.77□□□□□ -0.69
HERPUD1-218ENST00000569569 LINC00482Q8N8I6 264 aa10.77□□□□□ -0.69
HERPUD1-218ENST00000569569 OR5M8Q8NGP6 311 aa10.77□□□□□ -0.69
HERPUD1-218ENST00000569569 OR6F1Q8NGZ6 308 aa10.77□□□□□ -0.69
HERPUD1-218ENST00000569569 OR4S2Q8NH73 311 aa10.77□□□□□ -0.69
HERPUD1-218ENST00000569569 GRPEL2Q8TAA5 225 aa10.77□□□□□ -0.69
HERPUD1-218ENST00000569569 C4orf3Q8WVX3 66 aa10.77□□□□□ -0.69
HERPUD1-218ENST00000569569 RCC1LQ96I51 464 aaKnown RBP10.77□□□□□ -0.69
HERPUD1-218ENST00000569569 TMEM68Q96MH6 324 aa10.77□□□□□ -0.69
HERPUD1-218ENST00000569569 P2RX4Q99571 388 aa10.77□□□□□ -0.69
HERPUD1-218ENST00000569569 ZNF2Q9BSG1 426 aaPredicted RBP10.77□□□□□ -0.69
HERPUD1-218ENST00000569569 VSIG4Q9Y279 399 aa10.77□□□□□ -0.69
HERPUD1-218ENST00000569569 TNFSF12O43508 249 aa10.76□□□□□ -0.69
HERPUD1-218ENST00000569569 DUS4LO95620 317 aaKnown RBP10.76□□□□□ -0.69
HERPUD1-218ENST00000569569 SAA1P0DJI8 122 aaPredicted RBP10.76□□□□□ -0.69
HERPUD1-218ENST00000569569 IGLL1P15814 213 aa10.76□□□□□ -0.69
HERPUD1-218ENST00000569569 GNRHRP30968 328 aa10.76□□□□□ -0.69
HERPUD1-218ENST00000569569 RCVRNP35243 200 aa10.76□□□□□ -0.69
HERPUD1-218ENST00000569569 BRWD1-AS2P59051 145 aa10.76□□□□□ -0.69
HERPUD1-218ENST00000569569 TSPAN5P62079 268 aa10.76□□□□□ -0.69
HERPUD1-218ENST00000569569 SSBP2P81877 361 aaPredicted RBP10.76□□□□□ -0.69
HERPUD1-218ENST00000569569 CATR1Q13166 79 aa10.76□□□□□ -0.69
HERPUD1-218ENST00000569569 PRSS8Q16651 343 aa10.76□□□□□ -0.69
HERPUD1-218ENST00000569569 MRGPRG-AS1Q2M3A8 158 aa10.76□□□□□ -0.69
HERPUD1-218ENST00000569569 KPRPQ5T749 579 aaPredicted RBP10.76□□□□□ -0.69
HERPUD1-218ENST00000569569 IDO2Q6ZQW0 420 aa10.76□□□□□ -0.69
HERPUD1-218ENST00000569569 ZNF818PQ6ZRF7 136 aa10.76□□□□□ -0.69
HERPUD1-218ENST00000569569 DYNC2LI1Q8TCX1 351 aa10.76□□□□□ -0.69
HERPUD1-218ENST00000569569 MOB3AQ96BX8 217 aa10.76□□□□□ -0.69
HERPUD1-218ENST00000569569 RAX2Q96IS3 184 aa10.76□□□□□ -0.69
HERPUD1-218ENST00000569569 GPHA2Q96T91 129 aa10.76□□□□□ -0.69
HERPUD1-218ENST00000569569 CCDC59Q9P031 241 aaKnown RBP10.76□□□□□ -0.69
HERPUD1-218ENST00000569569 CTDSP2O14595 271 aa10.75□□□□□ -0.69
HERPUD1-218ENST00000569569 CREBL2O60519 120 aaPredicted RBP10.75□□□□□ -0.69
HERPUD1-218ENST00000569569 HRASP01112 189 aa10.75□□□□□ -0.69
HERPUD1-218ENST00000569569 TNXAQ16473 311 aa10.75□□□□□ -0.69
HERPUD1-218ENST00000569569 DEFB136Q30KP8 78 aa10.75□□□□□ -0.69
HERPUD1-218ENST00000569569 MMD2Q8IY49 270 aa10.75□□□□□ -0.69
HERPUD1-218ENST00000569569 VSTM2AQ8TAG5 236 aa10.75□□□□□ -0.69
HERPUD1-218ENST00000569569 ISOC1Q96CN7 298 aa10.75□□□□□ -0.69
HERPUD1-218ENST00000569569 DUX3Q96PT4 197 aa10.75□□□□□ -0.69
HERPUD1-218ENST00000569569 ABHD1Q96SE0 405 aa10.75□□□□□ -0.69
HERPUD1-218ENST00000569569 AIFM2Q9BRQ8 373 aa10.75□□□□□ -0.69
HERPUD1-218ENST00000569569 MIXL1Q9H2W2 232 aa10.75□□□□□ -0.69
HERPUD1-218ENST00000569569 SLA2Q9H6Q3 261 aa10.75□□□□□ -0.69
HERPUD1-218ENST00000569569 H3BMQ9 156 aa10.74□□□□□ -0.69
HERPUD1-218ENST00000569569 I3L521 148 aa10.74□□□□□ -0.69
HERPUD1-218ENST00000569569 RBFOX2O43251 390 aaKnown RBP eCLIP10.74□□□□□ -0.69
HERPUD1-218ENST00000569569 ACTL6BO94805 426 aa10.74□□□□□ -0.69
HERPUD1-218ENST00000569569 OR2A4O95047 310 aa10.74□□□□□ -0.69
HERPUD1-218ENST00000569569 RUNX1Q01196 453 aa10.74□□□□□ -0.69
HERPUD1-218ENST00000569569 LPCAT3Q6P1A2 487 aa10.74□□□□□ -0.69
HERPUD1-218ENST00000569569 LAX1Q8IWV1 398 aa10.74□□□□□ -0.69
HERPUD1-218ENST00000569569 SPAG16Q8N0X2 631 aa10.74□□□□□ -0.69
HERPUD1-218ENST00000569569 OR5T1Q8NG75 326 aa10.74□□□□□ -0.69
HERPUD1-218ENST00000569569 OR11H1Q8NG94 326 aa10.74□□□□□ -0.69
HERPUD1-218ENST00000569569 CASTOR1Q8WTX7 329 aa10.74□□□□□ -0.69
HERPUD1-218ENST00000569569 OR2A7Q96R45 310 aa10.74□□□□□ -0.69
HERPUD1-218ENST00000569569 MCRIP2Q9BUT9 160 aaKnown RBP10.74□□□□□ -0.69
HERPUD1-218ENST00000569569 ZNF430Q9H8G1 570 aaPredicted RBP10.74□□□□□ -0.69
HERPUD1-218ENST00000569569 GNB4Q9HAV0 340 aa10.74□□□□□ -0.69
HERPUD1-218ENST00000569569 KLK11Q9UBX7 282 aa10.74□□□□□ -0.69
HERPUD1-218ENST00000569569 MSGN1A6NI15 193 aa10.73□□□□□ -0.69
HERPUD1-218ENST00000569569 H3BUA1 57 aa10.73□□□□□ -0.69
HERPUD1-218ENST00000569569 WIPF1O43516 503 aa10.73□□□□□ -0.69
HERPUD1-218ENST00000569569 RAMP3O60896 148 aa10.73□□□□□ -0.69
HERPUD1-218ENST00000569569 HPRT1P00492 218 aa10.73□□□□□ -0.69
HERPUD1-218ENST00000569569 PDLIM3Q53GG5 364 aaPredicted RBP10.73□□□□□ -0.69
HERPUD1-218ENST00000569569 RNASE12Q5GAN4 147 aaKnown RBP10.73□□□□□ -0.69
HERPUD1-218ENST00000569569 VAX1Q5SQQ9 334 aa10.73□□□□□ -0.69
HERPUD1-218ENST00000569569 AADACL3Q5VUY0 350 aa10.73□□□□□ -0.69
HERPUD1-218ENST00000569569 CMTM1Q8IZ96 169 aa10.73□□□□□ -0.69
HERPUD1-218ENST00000569569 VKORC1L1Q8N0U8 176 aa10.73□□□□□ -0.69
HERPUD1-218ENST00000569569 PUSL1Q8N0Z8 303 aaKnown RBP10.73□□□□□ -0.69
HERPUD1-218ENST00000569569 POC5Q8NA72 575 aa10.73□□□□□ -0.69
HERPUD1-218ENST00000569569 OR51H1Q8NH63 302 aa10.73□□□□□ -0.69
HERPUD1-218ENST00000569569 OR52I2Q8NH67 350 aa10.73□□□□□ -0.69
HERPUD1-218ENST00000569569 CD300LFQ8TDQ1 290 aa10.73□□□□□ -0.69
HERPUD1-218ENST00000569569 FCAMRQ8WWV6 532 aa10.73□□□□□ -0.69
HERPUD1-218ENST00000569569 SRSF12Q8WXF0 261 aaKnown RBP10.73□□□□□ -0.69
HERPUD1-218ENST00000569569 RHOVQ96L33 236 aa10.73□□□□□ -0.69
HERPUD1-218ENST00000569569 MS4A10Q96PG2 267 aa10.73□□□□□ -0.69
HERPUD1-218ENST00000569569 PHB2Q99623 299 aa10.73□□□□□ -0.69
HERPUD1-218ENST00000569569 GPR61Q9BZJ8 451 aa10.73□□□□□ -0.69
HERPUD1-218ENST00000569569 ZNF355PQ9NSJ1 428 aa10.73□□□□□ -0.69
HERPUD1-218ENST00000569569 RABL2AQ9UBK7 228 aaPredicted RBP10.73□□□□□ -0.69
HERPUD1-218ENST00000569569 MTFP1Q9UDX5 166 aa10.73□□□□□ -0.69
HERPUD1-218ENST00000569569 RABL2BQ9UNT1 228 aa10.73□□□□□ -0.69
HERPUD1-218ENST00000569569 CEPT1Q9Y6K0 416 aa10.73□□□□□ -0.69
HERPUD1-218ENST00000569569 GABARAPH6UMI1 98 aa10.72□□□□□ -0.69
HERPUD1-218ENST00000569569 GPR31O00270 319 aa10.72□□□□□ -0.69
HERPUD1-218ENST00000569569 PGLYRP1O75594 196 aaPredicted RBP10.72□□□□□ -0.69
HERPUD1-218ENST00000569569 KBTBD11O94819 623 aa10.72□□□□□ -0.69
HERPUD1-218ENST00000569569 BRI3O95415 125 aa10.72□□□□□ -0.69
HERPUD1-218ENST00000569569 TRGV3P03979 118 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms