RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 RPA2P15927 270 aa12.79□□□□□ -0.36
USB1-215ENST00000569252 NQO2P16083 231 aa12.79□□□□□ -0.36
USB1-215ENST00000569252 SLC6A1P30531 599 aa12.79□□□□□ -0.36
USB1-215ENST00000569252 LPAR6P43657 344 aa12.79□□□□□ -0.36
USB1-215ENST00000569252 F2RL1P55085 397 aa12.79□□□□□ -0.36
USB1-215ENST00000569252 IFITM3Q01628 133 aa12.79□□□□□ -0.36
USB1-215ENST00000569252 TMEM128Q5BJH2 165 aa12.79□□□□□ -0.36
USB1-215ENST00000569252 C9orf152Q5JTZ5 239 aa12.79□□□□□ -0.36
USB1-215ENST00000569252 ADAD2Q8NCV1 583 aaKnown RBP12.79□□□□□ -0.36
USB1-215ENST00000569252 DMBX1Q8NFW5 382 aa12.79□□□□□ -0.36
USB1-215ENST00000569252 VSTM2AQ8TAG5 236 aa12.79□□□□□ -0.36
USB1-215ENST00000569252 PRSS22Q9GZN4 317 aa12.79□□□□□ -0.36
USB1-215ENST00000569252 PLEKHA2Q9HB19 425 aa12.79□□□□□ -0.36
USB1-215ENST00000569252 NUBP2Q9Y5Y2 271 aa12.79□□□□□ -0.36
USB1-215ENST00000569252 CRYM-AS1A6NIL9 109 aa12.78□□□□□ -0.36
USB1-215ENST00000569252 ARPC1BO15143 372 aaKnown RBP12.78□□□□□ -0.36
USB1-215ENST00000569252 CREBL2O60519 120 aaPredicted RBP12.78□□□□□ -0.36
USB1-215ENST00000569252 RAMP3O60896 148 aa12.78□□□□□ -0.36
USB1-215ENST00000569252 SPDEFO95238 335 aa12.78□□□□□ -0.36
USB1-215ENST00000569252 UBE2MP61081 183 aaKnown RBP12.78□□□□□ -0.36
USB1-215ENST00000569252 LIN54Q6MZP7 749 aa12.78□□□□□ -0.36
USB1-215ENST00000569252 PLET1Q6UQ28 207 aa12.78□□□□□ -0.36
USB1-215ENST00000569252 SLC25A42Q86VD7 318 aa12.78□□□□□ -0.36
USB1-215ENST00000569252 ZNF695Q8IW36 515 aa12.78□□□□□ -0.36
USB1-215ENST00000569252 Q8N6K4 173 aa12.78□□□□□ -0.36
USB1-215ENST00000569252 NPBQ8NG41 125 aa12.78□□□□□ -0.36
USB1-215ENST00000569252 RITA1Q96K30 269 aa12.78□□□□□ -0.36
USB1-215ENST00000569252 METTL1Q9UBP6 276 aaKnown RBP12.78□□□□□ -0.36
USB1-215ENST00000569252 TRAV6A0A075B6T7 132 aa12.77□□□□□ -0.37
USB1-215ENST00000569252 RRHO14718 337 aa12.77□□□□□ -0.37
USB1-215ENST00000569252 H2AFB2P0C5Z0 115 aa12.77□□□□□ -0.37
USB1-215ENST00000569252 VAMP1P23763 118 aa12.77□□□□□ -0.37
USB1-215ENST00000569252 BTCP35070 178 aa12.77□□□□□ -0.37
USB1-215ENST00000569252 RAB25P57735 213 aa12.77□□□□□ -0.37
USB1-215ENST00000569252 PSG5Q15238 335 aa12.77□□□□□ -0.37
USB1-215ENST00000569252 SP6Q3SY56 376 aa12.77□□□□□ -0.37
USB1-215ENST00000569252 C4orf46Q504U0 113 aa12.77□□□□□ -0.37
USB1-215ENST00000569252 TEX45Q8NA69 505 aa12.77□□□□□ -0.37
USB1-215ENST00000569252 RNASE11Q8TAA1 199 aaKnown RBP12.77□□□□□ -0.37
USB1-215ENST00000569252 C20orf85Q9H1P6 137 aa12.77□□□□□ -0.37
USB1-215ENST00000569252 COMMD9Q9P000 198 aa12.77□□□□□ -0.37
USB1-215ENST00000569252 TMEM89A2RUT3 159 aa12.76□□□□□ -0.37
USB1-215ENST00000569252 SLC25A17O43808 307 aa12.76□□□□□ -0.37
USB1-215ENST00000569252 CHST1O43916 411 aa12.76□□□□□ -0.37
USB1-215ENST00000569252 ACTL6BO94805 426 aa12.76□□□□□ -0.37
USB1-215ENST00000569252 KRASP01116 189 aa12.76□□□□□ -0.37
USB1-215ENST00000569252 OR5AC1P0C628 307 aa12.76□□□□□ -0.37
USB1-215ENST00000569252 UBE2KP61086 200 aa12.76□□□□□ -0.37
USB1-215ENST00000569252 SRPXP78539 464 aa12.76□□□□□ -0.37
USB1-215ENST00000569252 C5orf64Q2M2E5 130 aa12.76□□□□□ -0.37
USB1-215ENST00000569252 NRARPQ7Z6K4 114 aa12.76□□□□□ -0.37
USB1-215ENST00000569252 C5orf56Q8N8D9 126 aa12.76□□□□□ -0.37
USB1-215ENST00000569252 DUSP18Q8NEJ0 188 aa12.76□□□□□ -0.37
USB1-215ENST00000569252 R3HDM4Q96D70 268 aa12.76□□□□□ -0.37
USB1-215ENST00000569252 RRNAD1Q96FB5 475 aaKnown RBP12.76□□□□□ -0.37
USB1-215ENST00000569252 RHOVQ96L33 236 aa12.76□□□□□ -0.37
USB1-215ENST00000569252 RANBP3Q9H6Z4 567 aaPredicted RBP12.76□□□□□ -0.37
USB1-215ENST00000569252 PLSCR3Q9NRY6 295 aa12.76□□□□□ -0.37
USB1-215ENST00000569252 NUDT15Q9NV35 164 aa12.76□□□□□ -0.37
USB1-215ENST00000569252 FLVCR2Q9UPI3 526 aa12.76□□□□□ -0.37
USB1-215ENST00000569252 SNAPC5O75971 98 aa12.75□□□□□ -0.37
USB1-215ENST00000569252 OR2A4O95047 310 aa12.75□□□□□ -0.37
USB1-215ENST00000569252 S1PR2O95136 353 aa12.75□□□□□ -0.37
USB1-215ENST00000569252 CNIH1O95406 144 aa12.75□□□□□ -0.37
USB1-215ENST00000569252 CNTFRP26992 372 aa12.75□□□□□ -0.37
USB1-215ENST00000569252 COMPP49747 757 aaPredicted RBP12.75□□□□□ -0.37
USB1-215ENST00000569252 BLCAPP62952 87 aa12.75□□□□□ -0.37
USB1-215ENST00000569252 AWAT1Q58HT5 328 aa12.75□□□□□ -0.37
USB1-215ENST00000569252 SSX9Q7RTT3 188 aa12.75□□□□□ -0.37
USB1-215ENST00000569252 PPP1R27Q86WC6 154 aa12.75□□□□□ -0.37
USB1-215ENST00000569252 Q8N9W7 124 aa12.75□□□□□ -0.37
USB1-215ENST00000569252 OR2T6Q8NHC8 308 aa12.75□□□□□ -0.37
USB1-215ENST00000569252 GALNT14Q96FL9 552 aa12.75□□□□□ -0.37
USB1-215ENST00000569252 OR2A7Q96R45 310 aa12.75□□□□□ -0.37
USB1-215ENST00000569252 TP53RKQ96S44 253 aa12.75□□□□□ -0.37
USB1-215ENST00000569252 CLCC1Q96S66 551 aa12.75□□□□□ -0.37
USB1-215ENST00000569252 TMEM222Q9H0R3 208 aa12.75□□□□□ -0.37
USB1-215ENST00000569252 FBXL15Q9H469 300 aa12.75□□□□□ -0.37
USB1-215ENST00000569252 SRRM4A7MD48 611 aaKnown RBP12.74□□□□□ -0.37
USB1-215ENST00000569252 NDUFA3O95167 84 aa12.74□□□□□ -0.37
USB1-215ENST00000569252 PTTG1O95997 202 aa12.74□□□□□ -0.37
USB1-215ENST00000569252 DHFRP00374 187 aa12.74□□□□□ -0.37
USB1-215ENST00000569252 OR4E1P0C645 316 aa12.74□□□□□ -0.37
USB1-215ENST00000569252 ANXA7P20073 488 aaKnown RBP12.74□□□□□ -0.37
USB1-215ENST00000569252 UCP1P25874 307 aa12.74□□□□□ -0.37
USB1-215ENST00000569252 AKR1C2P52895 323 aa12.74□□□□□ -0.37
USB1-215ENST00000569252 BRWD1-AS2P59051 145 aa12.74□□□□□ -0.37
USB1-215ENST00000569252 RGS21Q2M5E4 152 aa12.74□□□□□ -0.37
USB1-215ENST00000569252 ZNF585BQ52M93 769 aa12.74□□□□□ -0.37
USB1-215ENST00000569252 H2BFWTQ7Z2G1 175 aa12.74□□□□□ -0.37
USB1-215ENST00000569252 VKORC1L1Q8N0U8 176 aa12.74□□□□□ -0.37
USB1-215ENST00000569252 LGI3Q8N145 548 aa12.74□□□□□ -0.37
USB1-215ENST00000569252 OR4F5Q8NH21 305 aa12.74□□□□□ -0.37
USB1-215ENST00000569252 OR4A5Q8NH83 315 aa12.74□□□□□ -0.37
USB1-215ENST00000569252 COQ8AQ8NI60 647 aa12.74□□□□□ -0.37
USB1-215ENST00000569252 CASTOR1Q8WTX7 329 aa12.74□□□□□ -0.37
USB1-215ENST00000569252 RBMXL1Q96E39 390 aaKnown RBP12.74□□□□□ -0.37
USB1-215ENST00000569252 ALX4Q9H161 411 aaPredicted RBP12.74□□□□□ -0.37
USB1-215ENST00000569252 BEX1Q9HBH7 125 aa12.74□□□□□ -0.37
USB1-215ENST00000569252 SIGLEC9Q9Y336 463 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms