RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 RPRMLQ8N4K4 120 aa6.09□□□□□ -1.43
CNOT1-216ENST00000569240 PSMB11A5LHX3 300 aa6.09□□□□□ -1.43
CNOT1-216ENST00000569240 PGPA6NDG6 321 aa6.09□□□□□ -1.43
CNOT1-216ENST00000569240 IGLC2P0DOY2 106 aa6.09□□□□□ -1.43
CNOT1-216ENST00000569240 IGLC3P0DOY3 106 aa6.09□□□□□ -1.43
CNOT1-216ENST00000569240 PTGDSP41222 190 aa6.09□□□□□ -1.43
CNOT1-216ENST00000569240 ZNF137PP52743 207 aa6.09□□□□□ -1.43
CNOT1-216ENST00000569240 C10orf128Q5T292 105 aa6.09□□□□□ -1.43
CNOT1-216ENST00000569240 LINC01555Q8NAE3 123 aa6.09□□□□□ -1.43
CNOT1-216ENST00000569240 ZNF714Q96N38 554 aa6.09□□□□□ -1.43
CNOT1-216ENST00000569240 F5H697 171 aa6.09□□□□□ -1.43
CNOT1-216ENST00000569240 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.09□□□□□ -1.43
CNOT1-216ENST00000569240 CDAP32320 146 aa6.09□□□□□ -1.43
CNOT1-216ENST00000569240 TGIF1Q15583 401 aa6.09□□□□□ -1.43
CNOT1-216ENST00000569240 OR4A5Q8NH83 315 aa6.09□□□□□ -1.43
CNOT1-216ENST00000569240 GNRHR2Q96P88 292 aa6.09□□□□□ -1.43
CNOT1-216ENST00000569240 LINC00271P0C7V0 271 aa6.09□□□□□ -1.43
CNOT1-216ENST00000569240 ASIPP42127 132 aa6.09□□□□□ -1.43
CNOT1-216ENST00000569240 UNQ5815/PRO19632Q6UWF5 114 aa6.09□□□□□ -1.43
CNOT1-216ENST00000569240 C8orf44Q96CB5 159 aa6.09□□□□□ -1.43
CNOT1-216ENST00000569240 WDR54Q9H977 334 aa6.09□□□□□ -1.43
CNOT1-216ENST00000569240 RNF115Q9Y4L5 304 aa6.09□□□□□ -1.43
CNOT1-216ENST00000569240 ID4P47928 161 aa6.09□□□□□ -1.44
CNOT1-216ENST00000569240 RAXQ9Y2V3 346 aa6.09□□□□□ -1.44
CNOT1-216ENST00000569240 GAGE12JA6NER3 117 aa6.09□□□□□ -1.44
CNOT1-216ENST00000569240 H7C1H1 209 aa6.09□□□□□ -1.44
CNOT1-216ENST00000569240 CDX4O14627 284 aaPredicted RBP6.09□□□□□ -1.44
CNOT1-216ENST00000569240 GAGE7O76087 117 aa6.09□□□□□ -1.44
CNOT1-216ENST00000569240 GAGE12FP0CL80 117 aa6.09□□□□□ -1.44
CNOT1-216ENST00000569240 GAGE12GP0CL81 117 aa6.09□□□□□ -1.44
CNOT1-216ENST00000569240 GAGE12IP0CL82 117 aa6.09□□□□□ -1.44
CNOT1-216ENST00000569240 GAGE4Q13068 117 aa6.09□□□□□ -1.44
CNOT1-216ENST00000569240 SRSF6Q13247 344 aaKnown RBP6.09□□□□□ -1.44
CNOT1-216ENST00000569240 LRRC61Q9BV99 259 aa6.09□□□□□ -1.44
CNOT1-216ENST00000569240 WDR83OSQ9Y284 106 aa6.09□□□□□ -1.44
CNOT1-216ENST00000569240 PPIAL4EA0A075B759 164 aa6.08□□□□□ -1.44
CNOT1-216ENST00000569240 IGHV2-26A0A0B4J1V2 119 aa6.08□□□□□ -1.44
CNOT1-216ENST00000569240 IGHV2-70DA0A0C4DH43 119 aa6.08□□□□□ -1.44
CNOT1-216ENST00000569240 MLNRO43193 412 aa6.08□□□□□ -1.44
CNOT1-216ENST00000569240 PPIAL4FP0DN26 164 aa6.08□□□□□ -1.44
CNOT1-216ENST00000569240 CCL1P22362 96 aa6.08□□□□□ -1.44
CNOT1-216ENST00000569240 LGALS7P47929 136 aa6.08□□□□□ -1.44
CNOT1-216ENST00000569240 TMEM78Q5T7P6 136 aa6.08□□□□□ -1.44
CNOT1-216ENST00000569240 MIC13Q5XKP0 118 aa6.08□□□□□ -1.44
CNOT1-216ENST00000569240 ELSPBP1Q96BH3 223 aa6.08□□□□□ -1.44
CNOT1-216ENST00000569240 MS4A4AQ96JQ5 239 aa6.08□□□□□ -1.44
CNOT1-216ENST00000569240 GFRA4Q9GZZ7 299 aa6.08□□□□□ -1.44
CNOT1-216ENST00000569240 POLR3KQ9Y2Y1 108 aaPredicted RBP6.08□□□□□ -1.44
CNOT1-216ENST00000569240 PPIAL4AQ9Y536 164 aa6.08□□□□□ -1.44
CNOT1-216ENST00000569240 K7ESM1 405 aa6.08□□□□□ -1.44
CNOT1-216ENST00000569240 PFN1P07737 140 aaKnown RBP6.08□□□□□ -1.44
CNOT1-216ENST00000569240 CX3CL1P78423 397 aa6.08□□□□□ -1.44
CNOT1-216ENST00000569240 DEFB133Q30KQ1 61 aa6.08□□□□□ -1.44
CNOT1-216ENST00000569240 INO80CQ6PI98 192 aaPredicted RBP6.08□□□□□ -1.44
CNOT1-216ENST00000569240 DNASE2BQ8WZ79 361 aa6.08□□□□□ -1.44
CNOT1-216ENST00000569240 KLHDC3Q9BQ90 382 aa6.08□□□□□ -1.44
CNOT1-216ENST00000569240 TCF19Q9Y242 345 aa6.08□□□□□ -1.44
CNOT1-216ENST00000569240 SCN7AQ01118 1682 aa6.08□□□□□ -1.44
CNOT1-216ENST00000569240 GREM1O60565 184 aa6.08□□□□□ -1.44
CNOT1-216ENST00000569240 ZNF585BQ52M93 769 aa6.08□□□□□ -1.44
CNOT1-216ENST00000569240 VHLLQ6RSH7 139 aa6.08□□□□□ -1.44
CNOT1-216ENST00000569240 TMEM144Q7Z5S9 345 aa6.08□□□□□ -1.44
CNOT1-216ENST00000569240 OR5AN1Q8NGI8 311 aa6.08□□□□□ -1.44
CNOT1-216ENST00000569240 CITED1Q99966 193 aa6.08□□□□□ -1.44
CNOT1-216ENST00000569240 FSCN3Q9NQT6 498 aa6.08□□□□□ -1.44
CNOT1-216ENST00000569240 KLF12Q9Y4X4 402 aa6.08□□□□□ -1.44
CNOT1-216ENST00000569240 GON4LQ3T8J9 2241 aa6.08□□□□□ -1.44
CNOT1-216ENST00000569240 IL6RP08887 468 aaPredicted RBP6.08□□□□□ -1.44
CNOT1-216ENST00000569240 ADCYAP1P18509 176 aa6.08□□□□□ -1.44
CNOT1-216ENST00000569240 PLNP26678 52 aa6.08□□□□□ -1.44
CNOT1-216ENST00000569240 MST1P26927 711 aa6.08□□□□□ -1.44
CNOT1-216ENST00000569240 SRSF3P84103 164 aaKnown RBP6.08□□□□□ -1.44
CNOT1-216ENST00000569240 KLF17Q5JT82 389 aaPredicted RBP6.08□□□□□ -1.44
CNOT1-216ENST00000569240 OR13H1Q8NG92 308 aa6.08□□□□□ -1.44
CNOT1-216ENST00000569240 CSTL1Q9H114 145 aa6.08□□□□□ -1.44
CNOT1-216ENST00000569240 NHP2Q9NX24 153 aaKnown RBP6.08□□□□□ -1.44
CNOT1-216ENST00000569240 ACRP10323 421 aa6.08□□□□□ -1.44
CNOT1-216ENST00000569240 ID1P41134 155 aa6.08□□□□□ -1.44
CNOT1-216ENST00000569240 KLRB1Q12918 225 aa6.08□□□□□ -1.44
CNOT1-216ENST00000569240 CCDC144NLQ6NUI1 221 aa6.08□□□□□ -1.44
CNOT1-216ENST00000569240 TM4SF19Q96DZ7 209 aa6.08□□□□□ -1.44
CNOT1-216ENST00000569240 PGLYRP4Q96LB8 373 aa6.08□□□□□ -1.44
CNOT1-216ENST00000569240 MS4A5Q9H3V2 200 aa6.08□□□□□ -1.44
CNOT1-216ENST00000569240 MARF1Q9Y4F3 1742 aaKnown RBP6.08□□□□□ -1.44
CNOT1-216ENST00000569240 A6NNC1 897 aa6.08□□□□□ -1.44
CNOT1-216ENST00000569240 C2orf83Q53S99 150 aa6.08□□□□□ -1.44
CNOT1-216ENST00000569240 IGHV1-24A0A0C4DH33 117 aa6.07□□□□□ -1.44
CNOT1-216ENST00000569240 C3orf79P0CE67 100 aa6.07□□□□□ -1.44
CNOT1-216ENST00000569240 GAS1P54826 345 aa6.07□□□□□ -1.44
CNOT1-216ENST00000569240 Q6ZS49 121 aa6.07□□□□□ -1.44
CNOT1-216ENST00000569240 ATOH7Q8N100 152 aa6.07□□□□□ -1.44
CNOT1-216ENST00000569240 SAA2-SAA4A0A096LPE2 208 aa6.07□□□□□ -1.44
CNOT1-216ENST00000569240 RRHO14718 337 aa6.07□□□□□ -1.44
CNOT1-216ENST00000569240 CA6P23280 308 aa6.07□□□□□ -1.44
CNOT1-216ENST00000569240 TFPI2P48307 235 aa6.07□□□□□ -1.44
CNOT1-216ENST00000569240 KIAA1644Q3SXP7 199 aa6.07□□□□□ -1.44
CNOT1-216ENST00000569240 OR9G1Q8NH87 305 aa6.07□□□□□ -1.44
CNOT1-216ENST00000569240 SRSF12Q8WXF0 261 aaKnown RBP6.07□□□□□ -1.44
CNOT1-216ENST00000569240 HARBI1Q96MB7 349 aa6.07□□□□□ -1.44
CNOT1-216ENST00000569240 R3HDMLQ9H3Y0 253 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms