RNA–Protein interactions for RNA: ENST00000569117.1

CDH3-210, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-210ENST00000569117 PRAF2O60831 178 aa8.37□□□□□ -1.07
CDH3-210ENST00000569117 FCGR3BO75015 233 aa8.37□□□□□ -1.07
CDH3-210ENST00000569117 HLA-AP01891 365 aaKnown RBP8.37□□□□□ -1.07
CDH3-210ENST00000569117 IGKV1-16P04430 117 aa8.37□□□□□ -1.07
CDH3-210ENST00000569117 SNRNP70P08621 437 aaKnown RBP8.37□□□□□ -1.07
CDH3-210ENST00000569117 OR5AC1P0C628 307 aa8.37□□□□□ -1.07
CDH3-210ENST00000569117 OR4E1P0C645 316 aa8.37□□□□□ -1.07
CDH3-210ENST00000569117 VSIG10L2P0DP72 767 aa8.37□□□□□ -1.07
CDH3-210ENST00000569117 ANXA3P12429 323 aa8.37□□□□□ -1.07
CDH3-210ENST00000569117 UCP1P25874 307 aa8.37□□□□□ -1.07
CDH3-210ENST00000569117 CBX3Q13185 183 aa8.37□□□□□ -1.07
CDH3-210ENST00000569117 DHRS2Q13268 280 aa8.37□□□□□ -1.07
CDH3-210ENST00000569117 EBI3Q14213 229 aa8.37□□□□□ -1.07
CDH3-210ENST00000569117 Q6YL49 198 aa8.37□□□□□ -1.07
CDH3-210ENST00000569117 LYG2Q86SG7 212 aa8.37□□□□□ -1.07
CDH3-210ENST00000569117 SPAG16Q8N0X2 631 aa8.37□□□□□ -1.07
CDH3-210ENST00000569117 TMEM222Q9H0R3 208 aa8.37□□□□□ -1.07
CDH3-210ENST00000569117 COMMD9Q9P000 198 aa8.37□□□□□ -1.07
CDH3-210ENST00000569117 A0A0B4J293 547 aa8.36□□□□□ -1.07
CDH3-210ENST00000569117 C9orf170A2RU37 121 aa8.36□□□□□ -1.07
CDH3-210ENST00000569117 H3BUX3 64 aa8.36□□□□□ -1.07
CDH3-210ENST00000569117 H7C2Y5 167 aa8.36□□□□□ -1.07
CDH3-210ENST00000569117 RAMP3O60896 148 aa8.36□□□□□ -1.07
CDH3-210ENST00000569117 CRLF1O75462 422 aa8.36□□□□□ -1.07
CDH3-210ENST00000569117 SFT2D2O95562 160 aa8.36□□□□□ -1.07
CDH3-210ENST00000569117 CRYZL1O95825 349 aa8.36□□□□□ -1.07
CDH3-210ENST00000569117 MOSP00540 346 aa8.36□□□□□ -1.07
CDH3-210ENST00000569117 IFNA2P01563 188 aa8.36□□□□□ -1.07
CDH3-210ENST00000569117 IGKV1D-33P01593 117 aa8.36□□□□□ -1.07
CDH3-210ENST00000569117 IGKV1-33P01594 117 aa8.36□□□□□ -1.07
CDH3-210ENST00000569117 IL5P05113 134 aa8.36□□□□□ -1.07
CDH3-210ENST00000569117 FAM157CP0CG43 387 aa8.36□□□□□ -1.07
CDH3-210ENST00000569117 RPA2P15927 270 aa8.36□□□□□ -1.07
CDH3-210ENST00000569117 RAB25P57735 213 aa8.36□□□□□ -1.07
CDH3-210ENST00000569117 SRPXP78539 464 aa8.36□□□□□ -1.07
CDH3-210ENST00000569117 ZNF585BQ52M93 769 aa8.36□□□□□ -1.07
CDH3-210ENST00000569117 Q8N6K4 173 aa8.36□□□□□ -1.07
CDH3-210ENST00000569117 OR4C13Q8NGP0 309 aa8.36□□□□□ -1.07
CDH3-210ENST00000569117 OR2T10Q8NGZ9 312 aa8.36□□□□□ -1.07
CDH3-210ENST00000569117 OR5R1Q8NH85 324 aa8.36□□□□□ -1.07
CDH3-210ENST00000569117 OSR1Q8TAX0 266 aaPredicted RBP8.36□□□□□ -1.07
CDH3-210ENST00000569117 PIFOQ8TCI5 191 aa8.36□□□□□ -1.07
CDH3-210ENST00000569117 GLYATL2Q8WU03 294 aa8.36□□□□□ -1.07
CDH3-210ENST00000569117 SSMEM1Q8WWF3 244 aa8.36□□□□□ -1.07
CDH3-210ENST00000569117 SSX3Q99909 188 aa8.36□□□□□ -1.07
CDH3-210ENST00000569117 PLEKHA2Q9HB19 425 aa8.36□□□□□ -1.07
CDH3-210ENST00000569117 TCF19Q9Y242 345 aa8.36□□□□□ -1.07
CDH3-210ENST00000569117 KCNIP3Q9Y2W7 256 aa8.36□□□□□ -1.07
CDH3-210ENST00000569117 ZFHX3Q15911 3703 aa8.35□□□□□ -1.07
CDH3-210ENST00000569117 C7orf66A4D0T2 115 aa8.35□□□□□ -1.07
CDH3-210ENST00000569117 S1PR2O95136 353 aa8.35□□□□□ -1.07
CDH3-210ENST00000569117 SPDEFO95238 335 aa8.35□□□□□ -1.07
CDH3-210ENST00000569117 DUS4LO95620 317 aaKnown RBP8.35□□□□□ -1.07
CDH3-210ENST00000569117 DHFRP00374 187 aa8.35□□□□□ -1.07
CDH3-210ENST00000569117 HPRT1P00492 218 aa8.35□□□□□ -1.07
CDH3-210ENST00000569117 IGHV4-59P01825 116 aa8.35□□□□□ -1.07
CDH3-210ENST00000569117 SERPINE2P07093 398 aa8.35□□□□□ -1.07
CDH3-210ENST00000569117 FAM106CPP0CH98 169 aa8.35□□□□□ -1.07
CDH3-210ENST00000569117 IER3P46695 156 aa8.35□□□□□ -1.07
CDH3-210ENST00000569117 TMEM187Q14656 261 aa8.35□□□□□ -1.07
CDH3-210ENST00000569117 SLC9A3R2Q15599 337 aa8.35□□□□□ -1.07
CDH3-210ENST00000569117 POU2AF1Q16633 256 aa8.35□□□□□ -1.07
CDH3-210ENST00000569117 SP6Q3SY56 376 aa8.35□□□□□ -1.07
CDH3-210ENST00000569117 FBLN7Q53RD9 439 aa8.35□□□□□ -1.07
CDH3-210ENST00000569117 TMEM86BQ8N661 226 aa8.35□□□□□ -1.07
CDH3-210ENST00000569117 SIGLECL1Q8N7X8 197 aa8.35□□□□□ -1.07
CDH3-210ENST00000569117 LRTM2Q8N967 370 aa8.35□□□□□ -1.07
CDH3-210ENST00000569117 IL22RA2Q969J5 263 aa8.35□□□□□ -1.07
CDH3-210ENST00000569117 FLYWCH2Q96CP2 140 aaKnown RBP8.35□□□□□ -1.07
CDH3-210ENST00000569117 HARBI1Q96MB7 349 aa8.35□□□□□ -1.07
CDH3-210ENST00000569117 TMEM56Q96MV1 263 aa8.35□□□□□ -1.07
CDH3-210ENST00000569117 RNF5Q99942 180 aa8.35□□□□□ -1.07
CDH3-210ENST00000569117 BEX1Q9HBH7 125 aa8.35□□□□□ -1.07
CDH3-210ENST00000569117 PITPNC1Q9UKF7 332 aa8.35□□□□□ -1.07
CDH3-210ENST00000569117 POMT1Q9Y6A1 747 aa8.35□□□□□ -1.07
CDH3-210ENST00000569117 TMEM56-RWDD3S4R434 201 aa8.35□□□□□ -1.07
CDH3-210ENST00000569117 PIGBOS1A0A0B4J2F0 54 aa8.34□□□□□ -1.07
CDH3-210ENST00000569117 A6NDX4 124 aa8.34□□□□□ -1.07
CDH3-210ENST00000569117 BTBD17A6NE02 478 aa8.34□□□□□ -1.07
CDH3-210ENST00000569117 SNRPGP15A8MWD9 76 aa8.34□□□□□ -1.07
CDH3-210ENST00000569117 HOXA3O43365 443 aaPredicted RBP8.34□□□□□ -1.07
CDH3-210ENST00000569117 CDS2O95674 445 aa8.34□□□□□ -1.07
CDH3-210ENST00000569117 IGKV1-39P01597 117 aa8.34□□□□□ -1.07
CDH3-210ENST00000569117 IGKV1D-39P04432 117 aa8.34□□□□□ -1.07
CDH3-210ENST00000569117 TMEM11P17152 192 aa8.34□□□□□ -1.07
CDH3-210ENST00000569117 CD24P25063 80 aa8.34□□□□□ -1.07
CDH3-210ENST00000569117 LPAR6P43657 344 aa8.34□□□□□ -1.07
CDH3-210ENST00000569117 HES1Q14469 280 aa8.34□□□□□ -1.07
CDH3-210ENST00000569117 TATDN3Q17R31 274 aa8.34□□□□□ -1.07
CDH3-210ENST00000569117 ANKRD55Q3KP44 614 aa8.34□□□□□ -1.07
CDH3-210ENST00000569117 RBMS3Q6XE24 437 aaKnown RBP8.34□□□□□ -1.07
CDH3-210ENST00000569117 C16orf82Q7Z2V1 217 aa8.34□□□□□ -1.07
CDH3-210ENST00000569117 OR8H1Q8NGG4 311 aa8.34□□□□□ -1.07
CDH3-210ENST00000569117 OR52B4Q8NGK2 314 aa8.34□□□□□ -1.07
CDH3-210ENST00000569117 LHFPL5Q8TAF8 219 aa8.34□□□□□ -1.07
CDH3-210ENST00000569117 ZNF431Q8TF32 576 aaPredicted RBP8.34□□□□□ -1.07
CDH3-210ENST00000569117 CASTOR1Q8WTX7 329 aa8.34□□□□□ -1.07
CDH3-210ENST00000569117 MITD1Q8WV92 249 aa8.34□□□□□ -1.07
CDH3-210ENST00000569117 RBPMSQ93062 196 aaKnown RBP8.34□□□□□ -1.07
CDH3-210ENST00000569117 RBMXL1Q96E39 390 aaKnown RBP8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms