RNA–Protein interactions for RNA: ENST00000567704.5

CSPG4P13-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

BASIC

Gene CSPG4P13, Length 4,801 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-202ENST00000567704 SCO2A0A1W2PP80 73 aa10.59□□□□□ -0.71
CSPG4P13-202ENST00000567704 CELA2AP08217 269 aa10.59□□□□□ -0.71
CSPG4P13-202ENST00000567704 C1QTNF9P0C862 333 aa10.59□□□□□ -0.71
CSPG4P13-202ENST00000567704 REG1BP48304 166 aa10.59□□□□□ -0.71
CSPG4P13-202ENST00000567704 ARL6IP6Q8N6S5 226 aa10.59□□□□□ -0.71
CSPG4P13-202ENST00000567704 SNRNP40Q96DI7 357 aaKnown RBP10.59□□□□□ -0.71
CSPG4P13-202ENST00000567704 RASL11BQ9BPW5 248 aa10.59□□□□□ -0.71
CSPG4P13-202ENST00000567704 C2orf88Q9BSF0 95 aa10.59□□□□□ -0.71
CSPG4P13-202ENST00000567704 AP5S1Q9NUS5 200 aa10.59□□□□□ -0.71
CSPG4P13-202ENST00000567704 PLXNB2O15031 1838 aa10.59□□□□□ -0.71
CSPG4P13-202ENST00000567704 TRBV24-1A0A075B6N3 115 aa10.59□□□□□ -0.71
CSPG4P13-202ENST00000567704 CEACAM18A8MTB9 384 aa10.59□□□□□ -0.71
CSPG4P13-202ENST00000567704 TNFSF15O95150 251 aa10.59□□□□□ -0.71
CSPG4P13-202ENST00000567704 OR4A8P0C604 315 aa10.59□□□□□ -0.71
CSPG4P13-202ENST00000567704 C8orf88P0DMB2 117 aa10.59□□□□□ -0.71
CSPG4P13-202ENST00000567704 ZNF826PQ6ZT77 177 aa10.59□□□□□ -0.71
CSPG4P13-202ENST00000567704 OR51G1Q8NGK1 321 aa10.59□□□□□ -0.71
CSPG4P13-202ENST00000567704 CCL4P13236 92 aa10.59□□□□□ -0.71
CSPG4P13-202ENST00000567704 ADMP35318 185 aa10.59□□□□□ -0.71
CSPG4P13-202ENST00000567704 CLDN18P56856 261 aa10.59□□□□□ -0.71
CSPG4P13-202ENST00000567704 TDHQ8IZJ6 230 aa10.59□□□□□ -0.71
CSPG4P13-202ENST00000567704 ZDHHC16Q969W1 377 aa10.59□□□□□ -0.71
CSPG4P13-202ENST00000567704 RTN4RQ9BZR6 473 aa10.59□□□□□ -0.71
CSPG4P13-202ENST00000567704 HEATR5BQ9P2D3 2071 aa10.59□□□□□ -0.71
CSPG4P13-202ENST00000567704 HYPMO75409 117 aa10.59□□□□□ -0.71
CSPG4P13-202ENST00000567704 MPZP25189 248 aa10.59□□□□□ -0.71
CSPG4P13-202ENST00000567704 SUPT4H1P63272 117 aaKnown RBP10.59□□□□□ -0.71
CSPG4P13-202ENST00000567704 DNLZQ5SXM8 178 aa10.59□□□□□ -0.71
CSPG4P13-202ENST00000567704 ZNF841Q6ZN19 808 aa10.59□□□□□ -0.71
CSPG4P13-202ENST00000567704 SLC22A18ASQ8N1D0 253 aa10.59□□□□□ -0.71
CSPG4P13-202ENST00000567704 AKAP6Q13023 2319 aa10.58□□□□□ -0.72
CSPG4P13-202ENST00000567704 IGKV1D-8A0A087WSZ0 117 aa10.58□□□□□ -0.72
CSPG4P13-202ENST00000567704 FAM157AC9JC47 383 aa10.58□□□□□ -0.72
CSPG4P13-202ENST00000567704 KLF7O75840 302 aaPredicted RBP10.58□□□□□ -0.72
CSPG4P13-202ENST00000567704 PRDX2P32119 198 aa10.58□□□□□ -0.72
CSPG4P13-202ENST00000567704 IGLV3-21P80748 117 aaPredicted RBP10.58□□□□□ -0.72
CSPG4P13-202ENST00000567704 VKORC1L1Q8N0U8 176 aa10.58□□□□□ -0.72
CSPG4P13-202ENST00000567704 GVINP1Q7Z2Y8 2422 aa10.58□□□□□ -0.72
CSPG4P13-202ENST00000567704 PROB1E7EW31 1015 aa10.58□□□□□ -0.72
CSPG4P13-202ENST00000567704 TGFBR3LH3BV60 316 aa10.58□□□□□ -0.72
CSPG4P13-202ENST00000567704 IGHV4-34P06331 123 aa10.58□□□□□ -0.72
CSPG4P13-202ENST00000567704 ARF6P62330 175 aa10.58□□□□□ -0.72
CSPG4P13-202ENST00000567704 LDLRAD2Q5SZI1 272 aa10.58□□□□□ -0.72
CSPG4P13-202ENST00000567704 ZNF501Q96CX3 271 aaPredicted RBP10.58□□□□□ -0.72
CSPG4P13-202ENST00000567704 NABP2Q9BQ15 211 aa10.58□□□□□ -0.72
CSPG4P13-202ENST00000567704 SCN8AQ9UQD0 1980 aa10.58□□□□□ -0.72
CSPG4P13-202ENST00000567704 ARHGEF17Q96PE2 2063 aaPredicted RBP10.58□□□□□ -0.72
CSPG4P13-202ENST00000567704 DOCK3Q8IZD9 2030 aa10.58□□□□□ -0.72
CSPG4P13-202ENST00000567704 GNG7O60262 68 aa10.58□□□□□ -0.72
CSPG4P13-202ENST00000567704 STPG3Q8N7X2 389 aa10.58□□□□□ -0.72
CSPG4P13-202ENST00000567704 C18orf12Q96KH6 178 aa10.58□□□□□ -0.72
CSPG4P13-202ENST00000567704 RFNGQ9Y644 331 aa10.58□□□□□ -0.72
CSPG4P13-202ENST00000567704 LOC285556D6RIA3 1793 aa10.58□□□□□ -0.72
CSPG4P13-202ENST00000567704 PGPEP1LA6NFU8 196 aa10.58□□□□□ -0.72
CSPG4P13-202ENST00000567704 NPIPB13A6NJU9 1138 aa10.58□□□□□ -0.72
CSPG4P13-202ENST00000567704 NPIPB4C9JG80 1138 aa10.58□□□□□ -0.72
CSPG4P13-202ENST00000567704 PRRG2O14669 202 aa10.58□□□□□ -0.72
CSPG4P13-202ENST00000567704 EPHA8P29322 1005 aaPredicted RBP10.58□□□□□ -0.72
CSPG4P13-202ENST00000567704 CKS2P33552 79 aa10.58□□□□□ -0.72
CSPG4P13-202ENST00000567704 SSPNQ14714 243 aa10.58□□□□□ -0.72
CSPG4P13-202ENST00000567704 FBLN7Q53RD9 439 aa10.58□□□□□ -0.72
CSPG4P13-202ENST00000567704 CDX2Q99626 313 aaPredicted RBP10.58□□□□□ -0.72
CSPG4P13-202ENST00000567704 TCF19Q9Y242 345 aa10.58□□□□□ -0.72
CSPG4P13-202ENST00000567704 RPL30P62888 115 aaKnown RBP10.57□□□□□ -0.72
CSPG4P13-202ENST00000567704 ZNF324BQ6AW86 544 aaPredicted RBP10.57□□□□□ -0.72
CSPG4P13-202ENST00000567704 ZNF664Q8N3J9 261 aa10.57□□□□□ -0.72
CSPG4P13-202ENST00000567704 OR10AG1Q8NH19 301 aa10.57□□□□□ -0.72
CSPG4P13-202ENST00000567704 ODAMA1E959 279 aa10.57□□□□□ -0.72
CSPG4P13-202ENST00000567704 TMEM210A6NLX4 147 aa10.57□□□□□ -0.72
CSPG4P13-202ENST00000567704 C9JQL5 133 aa10.57□□□□□ -0.72
CSPG4P13-202ENST00000567704 BEND2Q8NDZ0 799 aa10.57□□□□□ -0.72
CSPG4P13-202ENST00000567704 GBF1Q92538 1859 aa10.57□□□□□ -0.72
CSPG4P13-202ENST00000567704 A0A0A6YYD4 124 aa10.57□□□□□ -0.72
CSPG4P13-202ENST00000567704 A0A1B0GV72 72 aa10.57□□□□□ -0.72
CSPG4P13-202ENST00000567704 H3BTX0 84 aa10.57□□□□□ -0.72
CSPG4P13-202ENST00000567704 CGAP01215 116 aa10.57□□□□□ -0.72
CSPG4P13-202ENST00000567704 IGKV3-11P04433 115 aa10.57□□□□□ -0.72
CSPG4P13-202ENST00000567704 HERVK_113P61574 105 aa10.57□□□□□ -0.72
CSPG4P13-202ENST00000567704 FBLN5Q9UBX5 448 aa10.57□□□□□ -0.72
CSPG4P13-202ENST00000567704 HSPE1P61604 102 aaKnown RBP10.56□□□□□ -0.72
CSPG4P13-202ENST00000567704 HOXA4Q00056 320 aaPredicted RBP10.56□□□□□ -0.72
CSPG4P13-202ENST00000567704 CALHM1Q8IU99 346 aa10.56□□□□□ -0.72
CSPG4P13-202ENST00000567704 NFAM1Q8NET5 270 aaPredicted RBP10.56□□□□□ -0.72
CSPG4P13-202ENST00000567704 ZNF502Q8TBZ5 544 aa10.56□□□□□ -0.72
CSPG4P13-202ENST00000567704 WNT5BQ9H1J7 359 aa10.56□□□□□ -0.72
CSPG4P13-202ENST00000567704 HS3ST3B1Q9Y662 390 aa10.56□□□□□ -0.72
CSPG4P13-202ENST00000567704 IGKV1-9A0A0C4DH69 117 aa10.56□□□□□ -0.72
CSPG4P13-202ENST00000567704 NAPSAO96009 420 aa10.56□□□□□ -0.72
CSPG4P13-202ENST00000567704 KIR2DL2P43627 348 aaPredicted RBP10.56□□□□□ -0.72
CSPG4P13-202ENST00000567704 TWIST1Q15672 202 aa10.56□□□□□ -0.72
CSPG4P13-202ENST00000567704 HSPB7Q9UBY9 170 aa10.56□□□□□ -0.72
CSPG4P13-202ENST00000567704 NYNRINQ9P2P1 1898 aaKnown RBP10.56□□□□□ -0.72
CSPG4P13-202ENST00000567704 J3KRW8 73 aa10.56□□□□□ -0.72
CSPG4P13-202ENST00000567704 TRA2AQ13595 282 aaKnown RBP eCLIP10.56□□□□□ -0.72
CSPG4P13-202ENST00000567704 FBXW9Q5XUX1 488 aa10.56□□□□□ -0.72
CSPG4P13-202ENST00000567704 FSCN3Q9NQT6 498 aa10.56□□□□□ -0.72
CSPG4P13-202ENST00000567704 GLRX2Q9NS18 164 aa10.56□□□□□ -0.72
CSPG4P13-202ENST00000567704 TMEM56-RWDD3S4R434 201 aa10.56□□□□□ -0.72
CSPG4P13-202ENST00000567704 A1L4Q6 167 aa10.56□□□□□ -0.72
CSPG4P13-202ENST00000567704 LIPFP07098 398 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms