RNA–Protein interactions for RNA: ENST00000567399.5

COMMD4-219, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 976 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-219ENST00000567399 RSRP1Q9BUV0 290 aa11.96□□□□□ -0.49
COMMD4-219ENST00000567399 SCP2D1Q9UJQ7 156 aa11.96□□□□□ -0.49
COMMD4-219ENST00000567399 WSB1Q9Y6I7 421 aa11.96□□□□□ -0.49
COMMD4-219ENST00000567399 COL6A5A8TX70 2615 aa11.95□□□□□ -0.5
COMMD4-219ENST00000567399 ATP6V0E1O15342 81 aa11.95□□□□□ -0.5
COMMD4-219ENST00000567399 RAMP3O60896 148 aa11.95□□□□□ -0.5
COMMD4-219ENST00000567399 HPRT1P00492 218 aa11.95□□□□□ -0.5
COMMD4-219ENST00000567399 IGLV2-23P01705 113 aa11.95□□□□□ -0.5
COMMD4-219ENST00000567399 OPN1MWP04001 364 aa11.95□□□□□ -0.5
COMMD4-219ENST00000567399 OPN1MW2P0DN77 364 aa11.95□□□□□ -0.5
COMMD4-219ENST00000567399 OPN1MW3P0DN78 364 aa11.95□□□□□ -0.5
COMMD4-219ENST00000567399 FXYD3Q14802 87 aa11.95□□□□□ -0.5
COMMD4-219ENST00000567399 ZNF79Q15937 498 aa11.95□□□□□ -0.5
COMMD4-219ENST00000567399 ECSCRQ19T08 205 aa11.95□□□□□ -0.5
COMMD4-219ENST00000567399 CNPY1Q3B7I2 92 aa11.95□□□□□ -0.5
COMMD4-219ENST00000567399 TRIQKQ629K1 86 aa11.95□□□□□ -0.5
COMMD4-219ENST00000567399 HIST2H2BDQ6DRA6 164 aa11.95□□□□□ -0.5
COMMD4-219ENST00000567399 TEX38Q6PEX7 206 aa11.95□□□□□ -0.5
COMMD4-219ENST00000567399 ZNF562Q6V9R5 426 aa11.95□□□□□ -0.5
COMMD4-219ENST00000567399 IDO2Q6ZQW0 420 aa11.95□□□□□ -0.5
COMMD4-219ENST00000567399 SSX9Q7RTT3 188 aa11.95□□□□□ -0.5
COMMD4-219ENST00000567399 TBC1D26Q86UD7 250 aa11.95□□□□□ -0.5
COMMD4-219ENST00000567399 VKORC1L1Q8N0U8 176 aa11.95□□□□□ -0.5
COMMD4-219ENST00000567399 CCDC71LQ8N9Z2 235 aa11.95□□□□□ -0.5
COMMD4-219ENST00000567399 DMBX1Q8NFW5 382 aa11.95□□□□□ -0.5
COMMD4-219ENST00000567399 GRPEL2Q8TAA5 225 aa11.95□□□□□ -0.5
COMMD4-219ENST00000567399 VSTM2AQ8TAG5 236 aa11.95□□□□□ -0.5
COMMD4-219ENST00000567399 CITED2Q99967 270 aaPredicted RBP11.95□□□□□ -0.5
COMMD4-219ENST00000567399 HRASLSQ9HDD0 168 aa11.95□□□□□ -0.5
COMMD4-219ENST00000567399 TPSG1Q9NRR2 321 aa11.95□□□□□ -0.5
COMMD4-219ENST00000567399 COPZ2Q9P299 210 aa11.95□□□□□ -0.5
COMMD4-219ENST00000567399 C14orf166Q9Y224 244 aaKnown RBP11.95□□□□□ -0.5
COMMD4-219ENST00000567399 TRAV41A0A0B4J266 112 aa11.94□□□□□ -0.5
COMMD4-219ENST00000567399 A0A1W2PRX2 142 aa11.94□□□□□ -0.5
COMMD4-219ENST00000567399 RBFOX2O43251 390 aaKnown RBP eCLIP11.94□□□□□ -0.5
COMMD4-219ENST00000567399 OR2A4O95047 310 aa11.94□□□□□ -0.5
COMMD4-219ENST00000567399 IGF1P05019 195 aa11.94□□□□□ -0.5
COMMD4-219ENST00000567399 SAA1P0DJI8 122 aaPredicted RBP11.94□□□□□ -0.5
COMMD4-219ENST00000567399 PI3P19957 117 aa11.94□□□□□ -0.5
COMMD4-219ENST00000567399 F2RP25116 425 aa11.94□□□□□ -0.5
COMMD4-219ENST00000567399 ERVK-16P61578 105 aa11.94□□□□□ -0.5
COMMD4-219ENST00000567399 ZNF45Q02386 682 aa11.94□□□□□ -0.5
COMMD4-219ENST00000567399 TNXAQ16473 311 aa11.94□□□□□ -0.5
COMMD4-219ENST00000567399 C2orf68Q2NKX9 166 aa11.94□□□□□ -0.5
COMMD4-219ENST00000567399 TMEM65Q6PI78 240 aa11.94□□□□□ -0.5
COMMD4-219ENST00000567399 C10orf99Q6UWK7 81 aa11.94□□□□□ -0.5
COMMD4-219ENST00000567399 LHFPL1Q86WI0 220 aa11.94□□□□□ -0.5
COMMD4-219ENST00000567399 COMMD1Q8N668 190 aa11.94□□□□□ -0.5
COMMD4-219ENST00000567399 GDPD1Q8N9F7 314 aa11.94□□□□□ -0.5
COMMD4-219ENST00000567399 OR51S1Q8NGJ8 323 aa11.94□□□□□ -0.5
COMMD4-219ENST00000567399 MARCH1Q8TCQ1 289 aa11.94□□□□□ -0.5
COMMD4-219ENST00000567399 ARPC1AQ92747 370 aa11.94□□□□□ -0.5
COMMD4-219ENST00000567399 ZNF486Q96H40 463 aaPredicted RBP11.94□□□□□ -0.5
COMMD4-219ENST00000567399 SCGB3A2Q96PL1 93 aa11.94□□□□□ -0.5
COMMD4-219ENST00000567399 OR2A7Q96R45 310 aa11.94□□□□□ -0.5
COMMD4-219ENST00000567399 PHB2Q99623 299 aa11.94□□□□□ -0.5
COMMD4-219ENST00000567399 ZNF735P0CB33 412 aa11.93□□□□□ -0.5
COMMD4-219ENST00000567399 NQO2P16083 231 aa11.93□□□□□ -0.5
COMMD4-219ENST00000567399 CD40LGP29965 261 aa11.93□□□□□ -0.5
COMMD4-219ENST00000567399 LPAR6P43657 344 aa11.93□□□□□ -0.5
COMMD4-219ENST00000567399 PIGPP57054 158 aa11.93□□□□□ -0.5
COMMD4-219ENST00000567399 TAS2R31P59538 309 aa11.93□□□□□ -0.5
COMMD4-219ENST00000567399 PJVKQ0ZLH3 352 aa11.93□□□□□ -0.5
COMMD4-219ENST00000567399 CXorf66Q5JRM2 361 aaPredicted RBP11.93□□□□□ -0.5
COMMD4-219ENST00000567399 UNQ5815/PRO19632Q6UWF5 114 aa11.93□□□□□ -0.5
COMMD4-219ENST00000567399 NDUFA11Q86Y39 141 aa11.93□□□□□ -0.5
COMMD4-219ENST00000567399 TCTEX1D1Q8N7M0 179 aa11.93□□□□□ -0.5
COMMD4-219ENST00000567399 OR13C8Q8NGS7 320 aa11.93□□□□□ -0.5
COMMD4-219ENST00000567399 RHOVQ96L33 236 aa11.93□□□□□ -0.5
COMMD4-219ENST00000567399 FAM103A1Q9BTL3 118 aaKnown RBP11.93□□□□□ -0.5
COMMD4-219ENST00000567399 SRRQ9GZT4 340 aa11.93□□□□□ -0.5
COMMD4-219ENST00000567399 SLC2A9Q9NRM0 540 aa11.93□□□□□ -0.5
COMMD4-219ENST00000567399 TSSC4Q9Y5U2 329 aaPredicted RBP11.93□□□□□ -0.5
COMMD4-219ENST00000567399 A0A1W2PN81 502 aa11.92□□□□□ -0.5
COMMD4-219ENST00000567399 NUDT19A8MXV4 375 aa11.92□□□□□ -0.5
COMMD4-219ENST00000567399 G3V318 75 aa11.92□□□□□ -0.5
COMMD4-219ENST00000567399 MPPED1O15442 326 aa11.92□□□□□ -0.5
COMMD4-219ENST00000567399 SERPINE2P07093 398 aa11.92□□□□□ -0.5
COMMD4-219ENST00000567399 CRYGBP07316 175 aa11.92□□□□□ -0.5
COMMD4-219ENST00000567399 RPA2P15927 270 aa11.92□□□□□ -0.5
COMMD4-219ENST00000567399 CHRNA7P36544 502 aa11.92□□□□□ -0.5
COMMD4-219ENST00000567399 BRWD1-AS2P59051 145 aa11.92□□□□□ -0.5
COMMD4-219ENST00000567399 PRSS8Q16651 343 aa11.92□□□□□ -0.5
COMMD4-219ENST00000567399 MMD2Q8IY49 270 aa11.92□□□□□ -0.5
COMMD4-219ENST00000567399 R3HDM4Q96D70 268 aa11.92□□□□□ -0.5
COMMD4-219ENST00000567399 PLEKHA2Q9HB19 425 aa11.92□□□□□ -0.5
COMMD4-219ENST00000567399 ZNF355PQ9NSJ1 428 aa11.92□□□□□ -0.5
COMMD4-219ENST00000567399 TEX13DA0A0J9YY54 714 aaPredicted RBP11.91□□□□□ -0.5
COMMD4-219ENST00000567399 LINC00854A0A1B0GVQ3 168 aa11.91□□□□□ -0.5
COMMD4-219ENST00000567399 S1PR2O95136 353 aa11.91□□□□□ -0.5
COMMD4-219ENST00000567399 CTSDP07339 412 aaPredicted RBP11.91□□□□□ -0.5
COMMD4-219ENST00000567399 PF4V1P10720 104 aa11.91□□□□□ -0.5
COMMD4-219ENST00000567399 NDPQ00604 133 aa11.91□□□□□ -0.5
COMMD4-219ENST00000567399 CD83Q01151 205 aa11.91□□□□□ -0.5
COMMD4-219ENST00000567399 KLF9Q13886 244 aaPredicted RBP11.91□□□□□ -0.5
COMMD4-219ENST00000567399 LFNGQ8NES3 379 aa11.91□□□□□ -0.5
COMMD4-219ENST00000567399 WIPF2Q8TF74 440 aaPredicted RBP11.91□□□□□ -0.5
COMMD4-219ENST00000567399 TRIM63Q969Q1 353 aa11.91□□□□□ -0.5
COMMD4-219ENST00000567399 ZNF430Q9H8G1 570 aaPredicted RBP11.91□□□□□ -0.5
COMMD4-219ENST00000567399 COMMD9Q9P000 198 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms