RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 VMA21Q3ZAQ7 101 aa11.24□□□□□ -0.61
FANCA-220ENST00000566409 KCTD9Q7L273 389 aa11.24□□□□□ -0.61
FANCA-220ENST00000566409 VKORC1L1Q8N0U8 176 aa11.24□□□□□ -0.61
FANCA-220ENST00000566409 ADAD2Q8NCV1 583 aaKnown RBP11.24□□□□□ -0.61
FANCA-220ENST00000566409 TSPAN14Q8NG11 270 aa11.24□□□□□ -0.61
FANCA-220ENST00000566409 SRSF12Q8WXF0 261 aaKnown RBP11.24□□□□□ -0.61
FANCA-220ENST00000566409 SNAPC3Q92966 411 aa11.24□□□□□ -0.61
FANCA-220ENST00000566409 KMT2CQ8NEZ4 4911 aaKnown RBP11.23□□□□□ -0.61
FANCA-220ENST00000566409 A0A087WXM4 84 aa11.23□□□□□ -0.61
FANCA-220ENST00000566409 C13orf42A0A1B0GVH6 325 aa11.23□□□□□ -0.61
FANCA-220ENST00000566409 ANKRD34BA5PLL1 514 aa11.23□□□□□ -0.61
FANCA-220ENST00000566409 AIREO43918 545 aa11.23□□□□□ -0.61
FANCA-220ENST00000566409 SLC22A5O76082 557 aa11.23□□□□□ -0.61
FANCA-220ENST00000566409 TRBV12-3P01733 135 aa11.23□□□□□ -0.61
FANCA-220ENST00000566409 SPNP16150 400 aa11.23□□□□□ -0.61
FANCA-220ENST00000566409 FCGR2CP31995 323 aa11.23□□□□□ -0.61
FANCA-220ENST00000566409 CDK10Q15131 360 aa11.23□□□□□ -0.61
FANCA-220ENST00000566409 C10orf55Q5SWW7 151 aa11.23□□□□□ -0.61
FANCA-220ENST00000566409 MFSD4AQ8N468 514 aa11.23□□□□□ -0.61
FANCA-220ENST00000566409 DCUN1D5Q9BTE7 237 aa11.23□□□□□ -0.61
FANCA-220ENST00000566409 RANGRFQ9HD47 186 aaPredicted RBP11.23□□□□□ -0.61
FANCA-220ENST00000566409 CCL28Q9NRJ3 127 aa11.23□□□□□ -0.61
FANCA-220ENST00000566409 TAS2R8Q9NYW2 309 aa11.23□□□□□ -0.61
FANCA-220ENST00000566409 A0A0G2JLM5 398 aa11.22□□□□□ -0.61
FANCA-220ENST00000566409 E7EUB6 86 aa11.22□□□□□ -0.61
FANCA-220ENST00000566409 XRCC3O43542 346 aa11.22□□□□□ -0.61
FANCA-220ENST00000566409 PRH1P02810 166 aa11.22□□□□□ -0.61
FANCA-220ENST00000566409 ARPC4P59998 168 aa11.22□□□□□ -0.61
FANCA-220ENST00000566409 ZNF45Q02386 682 aa11.22□□□□□ -0.61
FANCA-220ENST00000566409 KLF5Q13887 457 aaPredicted RBP11.22□□□□□ -0.61
FANCA-220ENST00000566409 TIMM50Q3ZCQ8 353 aa11.22□□□□□ -0.61
FANCA-220ENST00000566409 ZNF343Q6P1L6 599 aa11.22□□□□□ -0.61
FANCA-220ENST00000566409 HAPLN4Q86UW8 402 aa11.22□□□□□ -0.61
FANCA-220ENST00000566409 SECTM1Q8WVN6 248 aa11.22□□□□□ -0.61
FANCA-220ENST00000566409 TCTEX1D2Q8WW35 142 aa11.22□□□□□ -0.61
FANCA-220ENST00000566409 ACOT12Q8WYK0 555 aa11.22□□□□□ -0.61
FANCA-220ENST00000566409 PHB2Q99623 299 aa11.22□□□□□ -0.61
FANCA-220ENST00000566409 HSD17B10Q99714 261 aaKnown RBP11.22□□□□□ -0.61
FANCA-220ENST00000566409 DIABLOQ9NR28 239 aa11.22□□□□□ -0.61
FANCA-220ENST00000566409 COA4Q9NYJ1 87 aa11.22□□□□□ -0.61
FANCA-220ENST00000566409 ADAM30Q9UKF2 790 aa11.22□□□□□ -0.61
FANCA-220ENST00000566409 PRELID3BQ9Y3B1 194 aa11.22□□□□□ -0.61
FANCA-220ENST00000566409 DNAH7Q8WXX0 4024 aa11.22□□□□□ -0.61
FANCA-220ENST00000566409 A0A1B0GW64 132 aa11.21□□□□□ -0.61
FANCA-220ENST00000566409 MEIS3P1A6NDR6 274 aa11.21□□□□□ -0.61
FANCA-220ENST00000566409 TRIM64CA6NLI5 447 aa11.21□□□□□ -0.61
FANCA-220ENST00000566409 TNFSF12O43508 249 aa11.21□□□□□ -0.61
FANCA-220ENST00000566409 TMEM127O75204 238 aa11.21□□□□□ -0.61
FANCA-220ENST00000566409 TNFAIP8O95379 198 aa11.21□□□□□ -0.61
FANCA-220ENST00000566409 LY86O95711 162 aa11.21□□□□□ -0.61
FANCA-220ENST00000566409 OR9G9P0C7N8 305 aa11.21□□□□□ -0.61
FANCA-220ENST00000566409 IL34Q6ZMJ4 242 aa11.21□□□□□ -0.61
FANCA-220ENST00000566409 ZNF66Q6ZN08 573 aa11.21□□□□□ -0.61
FANCA-220ENST00000566409 MMD2Q8IY49 270 aa11.21□□□□□ -0.61
FANCA-220ENST00000566409 PUSL1Q8N0Z8 303 aaKnown RBP11.21□□□□□ -0.61
FANCA-220ENST00000566409 OR13F1Q8NGS4 319 aa11.21□□□□□ -0.61
FANCA-220ENST00000566409 ASCL2Q99929 193 aa11.21□□□□□ -0.61
FANCA-220ENST00000566409 TRBV9A0A0B4J1U6 114 aa11.2□□□□□ -0.62
FANCA-220ENST00000566409 TEX22C9J3V5 150 aa11.2□□□□□ -0.62
FANCA-220ENST00000566409 PPYP01298 95 aa11.2□□□□□ -0.62
FANCA-220ENST00000566409 IL6RP08887 468 aaPredicted RBP11.2□□□□□ -0.62
FANCA-220ENST00000566409 UBE2NLQ5JXB2 153 aa11.2□□□□□ -0.62
FANCA-220ENST00000566409 C19orf35Q6ZS72 473 aa11.2□□□□□ -0.62
FANCA-220ENST00000566409 CROCCP3Q8IVE0 287 aa11.2□□□□□ -0.62
FANCA-220ENST00000566409 TTC9CQ8N5M4 171 aa11.2□□□□□ -0.62
FANCA-220ENST00000566409 SAMD12Q8N8I0 201 aa11.2□□□□□ -0.62
FANCA-220ENST00000566409 OR5AP2Q8NGF4 316 aa11.2□□□□□ -0.62
FANCA-220ENST00000566409 OR4S2Q8NH73 311 aa11.2□□□□□ -0.62
FANCA-220ENST00000566409 TMEM167AQ8TBQ9 72 aa11.2□□□□□ -0.62
FANCA-220ENST00000566409 S100A16Q96FQ6 103 aaKnown RBP11.2□□□□□ -0.62
FANCA-220ENST00000566409 USMG5Q96IX5 58 aa11.2□□□□□ -0.62
FANCA-220ENST00000566409 AKIP1Q9NQ31 210 aa11.2□□□□□ -0.62
FANCA-220ENST00000566409 PEF1Q9UBV8 284 aaKnown RBP11.2□□□□□ -0.62
FANCA-220ENST00000566409 MRPS7Q9Y2R9 242 aaKnown RBP11.2□□□□□ -0.62
FANCA-220ENST00000566409 HMX3A6NHT5 357 aa11.19□□□□□ -0.62
FANCA-220ENST00000566409 KBTBD11O94819 623 aa11.19□□□□□ -0.62
FANCA-220ENST00000566409 OR2A4O95047 310 aa11.19□□□□□ -0.62
FANCA-220ENST00000566409 IGLV1-51P01701 117 aa11.19□□□□□ -0.62
FANCA-220ENST00000566409 NHLRC4P0CG21 123 aaPredicted RBP11.19□□□□□ -0.62
FANCA-220ENST00000566409 GP9P14770 177 aa11.19□□□□□ -0.62
FANCA-220ENST00000566409 ZP3P21754 424 aa11.19□□□□□ -0.62
FANCA-220ENST00000566409 NCS1P62166 190 aa11.19□□□□□ -0.62
FANCA-220ENST00000566409 RHOGP84095 191 aa11.19□□□□□ -0.62
FANCA-220ENST00000566409 MSMO1Q15800 293 aa11.19□□□□□ -0.62
FANCA-220ENST00000566409 GIMAP1Q8WWP7 306 aa11.19□□□□□ -0.62
FANCA-220ENST00000566409 SLC25A46Q96AG3 418 aa11.19□□□□□ -0.62
FANCA-220ENST00000566409 OR2A7Q96R45 310 aa11.19□□□□□ -0.62
FANCA-220ENST00000566409 OR4C12Q96R67 309 aa11.19□□□□□ -0.62
FANCA-220ENST00000566409 SPIN2AQ99865 258 aa11.19□□□□□ -0.62
FANCA-220ENST00000566409 SPIN2BQ9BPZ2 258 aa11.19□□□□□ -0.62
FANCA-220ENST00000566409 FUNDC2Q9BWH2 189 aa11.19□□□□□ -0.62
FANCA-220ENST00000566409 SLC5A7Q9GZV3 580 aa11.19□□□□□ -0.62
FANCA-220ENST00000566409 ANAPC10Q9UM13 185 aa11.19□□□□□ -0.62
FANCA-220ENST00000566409 SMAD5-AS1Q9Y6J3 95 aa11.19□□□□□ -0.62
FANCA-220ENST00000566409 MPPED1O15442 326 aa11.18□□□□□ -0.62
FANCA-220ENST00000566409 MYOD1P15172 320 aa11.18□□□□□ -0.62
FANCA-220ENST00000566409 CBX5P45973 191 aa11.18□□□□□ -0.62
FANCA-220ENST00000566409 RFX2P48378 723 aa11.18□□□□□ -0.62
FANCA-220ENST00000566409 SYNJ2BPP57105 145 aa11.18□□□□□ -0.62
FANCA-220ENST00000566409 TAS2R20P59543 309 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms