RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 ZNF430Q9H8G1 570 aaPredicted RBP6.5□□□□□ -1.37
CAPN3-213ENST00000565173 AKIP1Q9NQ31 210 aa6.5□□□□□ -1.37
CAPN3-213ENST00000565173 ELF5Q9UKW6 265 aaPredicted RBP6.5□□□□□ -1.37
CAPN3-213ENST00000565173 TNCP24821 2201 aa6.5□□□□□ -1.37
CAPN3-213ENST00000565173 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.49□□□□□ -1.37
CAPN3-213ENST00000565173 ZNF785A8K8V0 405 aa6.49□□□□□ -1.37
CAPN3-213ENST00000565173 CRYZL1O95825 349 aa6.49□□□□□ -1.37
CAPN3-213ENST00000565173 RANBP1P43487 201 aa6.49□□□□□ -1.37
CAPN3-213ENST00000565173 MRPS15P82914 257 aaKnown RBP6.49□□□□□ -1.37
CAPN3-213ENST00000565173 RHOGP84095 191 aa6.49□□□□□ -1.37
CAPN3-213ENST00000565173 TNXAQ16473 311 aa6.49□□□□□ -1.37
CAPN3-213ENST00000565173 TATDN3Q17R31 274 aa6.49□□□□□ -1.37
CAPN3-213ENST00000565173 RPEL1Q2QD12 228 aa6.49□□□□□ -1.37
CAPN3-213ENST00000565173 C22orf42Q6IC83 251 aa6.49□□□□□ -1.37
CAPN3-213ENST00000565173 LCN12Q6JVE5 192 aa6.49□□□□□ -1.37
CAPN3-213ENST00000565173 TTC9CQ8N5M4 171 aa6.49□□□□□ -1.37
CAPN3-213ENST00000565173 OSR1Q8TAX0 266 aaPredicted RBP6.49□□□□□ -1.37
CAPN3-213ENST00000565173 SNAPC3Q92966 411 aa6.49□□□□□ -1.37
CAPN3-213ENST00000565173 ADTRPQ96IZ2 230 aa6.49□□□□□ -1.37
CAPN3-213ENST00000565173 PHB2Q99623 299 aa6.49□□□□□ -1.37
CAPN3-213ENST00000565173 HIPK2Q9H2X6 1198 aa6.49□□□□□ -1.37
CAPN3-213ENST00000565173 BIRC6Q9NR09 4857 aa6.48□□□□□ -1.37
CAPN3-213ENST00000565173 A0A075B6Q4 140 aa6.48□□□□□ -1.37
CAPN3-213ENST00000565173 TRDV1A0A1B0GX56 115 aa6.48□□□□□ -1.37
CAPN3-213ENST00000565173 RBMY1BA6NDE4 496 aaKnown RBP6.48□□□□□ -1.37
CAPN3-213ENST00000565173 RBMY1EA6NEQ0 496 aaKnown RBP6.48□□□□□ -1.37
CAPN3-213ENST00000565173 FAM223BA6NKX1 122 aa6.48□□□□□ -1.37
CAPN3-213ENST00000565173 E7EUB6 86 aa6.48□□□□□ -1.37
CAPN3-213ENST00000565173 PDCD5O14737 125 aa6.48□□□□□ -1.37
CAPN3-213ENST00000565173 AIREO43918 545 aa6.48□□□□□ -1.37
CAPN3-213ENST00000565173 CD7P09564 240 aa6.48□□□□□ -1.37
CAPN3-213ENST00000565173 RBMY1DP0C7P1 496 aaKnown RBP6.48□□□□□ -1.37
CAPN3-213ENST00000565173 SAA1P0DJI8 122 aaPredicted RBP6.48□□□□□ -1.37
CAPN3-213ENST00000565173 SMIM18P0DKX4 95 aa6.48□□□□□ -1.37
CAPN3-213ENST00000565173 CD36P16671 472 aa6.48□□□□□ -1.37
CAPN3-213ENST00000565173 EDN2P20800 178 aa6.48□□□□□ -1.37
CAPN3-213ENST00000565173 GADD45AP24522 165 aa6.48□□□□□ -1.37
CAPN3-213ENST00000565173 MYL9P24844 172 aa6.48□□□□□ -1.37
CAPN3-213ENST00000565173 BRWD1-AS2P59051 145 aa6.48□□□□□ -1.37
CAPN3-213ENST00000565173 RPL30P62888 115 aaKnown RBP6.48□□□□□ -1.37
CAPN3-213ENST00000565173 ATP5G2Q06055 141 aa6.48□□□□□ -1.37
CAPN3-213ENST00000565173 CBX3Q13185 183 aa6.48□□□□□ -1.37
CAPN3-213ENST00000565173 EIF4EBP1Q13541 118 aaPredicted RBP6.48□□□□□ -1.37
CAPN3-213ENST00000565173 CDK10Q15131 360 aa6.48□□□□□ -1.37
CAPN3-213ENST00000565173 DEFB114Q30KQ6 69 aa6.48□□□□□ -1.37
CAPN3-213ENST00000565173 VMA21Q3ZAQ7 101 aa6.48□□□□□ -1.37
CAPN3-213ENST00000565173 CD300EQ496F6 205 aaPredicted RBP6.48□□□□□ -1.37
CAPN3-213ENST00000565173 C10orf55Q5SWW7 151 aa6.48□□□□□ -1.37
CAPN3-213ENST00000565173 GTSCR1Q86UQ5 136 aa6.48□□□□□ -1.37
CAPN3-213ENST00000565173 FAM223AQ8IWN6 122 aa6.48□□□□□ -1.37
CAPN3-213ENST00000565173 OR2K2Q8NGT1 345 aa6.48□□□□□ -1.37
CAPN3-213ENST00000565173 GINS4Q9BRT9 223 aa6.48□□□□□ -1.37
CAPN3-213ENST00000565173 OR51E2Q9H255 320 aa6.48□□□□□ -1.37
CAPN3-213ENST00000565173 TUBA4BQ9H853 241 aa6.48□□□□□ -1.37
CAPN3-213ENST00000565173 RETNQ9HD89 108 aa6.48□□□□□ -1.37
CAPN3-213ENST00000565173 PEMTQ9UBM1 199 aa6.48□□□□□ -1.37
CAPN3-213ENST00000565173 SSR3Q9UNL2 185 aa6.48□□□□□ -1.37
CAPN3-213ENST00000565173 RBM7Q9Y580 266 aaKnown RBP6.48□□□□□ -1.37
CAPN3-213ENST00000565173 FRAS1Q86XX4 4008 aa6.47□□□□□ -1.37
CAPN3-213ENST00000565173 LOC100506127A0A0U1RQW1 187 aa6.47□□□□□ -1.37
CAPN3-213ENST00000565173 A0A1B0GW64 132 aa6.47□□□□□ -1.37
CAPN3-213ENST00000565173 METTL21EPA6NDL7 271 aa6.47□□□□□ -1.37
CAPN3-213ENST00000565173 HMX3A6NHT5 357 aa6.47□□□□□ -1.37
CAPN3-213ENST00000565173 TEX22C9J3V5 150 aa6.47□□□□□ -1.37
CAPN3-213ENST00000565173 J3QRK9 145 aa6.47□□□□□ -1.37
CAPN3-213ENST00000565173 FCGR3BO75015 233 aa6.47□□□□□ -1.37
CAPN3-213ENST00000565173 HLA-DQB1P01920 261 aa6.47□□□□□ -1.37
CAPN3-213ENST00000565173 IFNA6P05013 189 aa6.47□□□□□ -1.37
CAPN3-213ENST00000565173 IL6RP08887 468 aaPredicted RBP6.47□□□□□ -1.37
CAPN3-213ENST00000565173 GALP22466 123 aa6.47□□□□□ -1.37
CAPN3-213ENST00000565173 NFYAP23511 347 aaPredicted RBP6.47□□□□□ -1.37
CAPN3-213ENST00000565173 DTYMKP23919 212 aa6.47□□□□□ -1.37
CAPN3-213ENST00000565173 TALDO1P37837 337 aa6.47□□□□□ -1.37
CAPN3-213ENST00000565173 KIR2DS2P43631 304 aa6.47□□□□□ -1.37
CAPN3-213ENST00000565173 ARFRP1Q13795 201 aa6.47□□□□□ -1.37
CAPN3-213ENST00000565173 EXOSC2Q13868 293 aaKnown RBP6.47□□□□□ -1.37
CAPN3-213ENST00000565173 CDNFQ49AH0 187 aa6.47□□□□□ -1.37
CAPN3-213ENST00000565173 C19orf35Q6ZS72 473 aa6.47□□□□□ -1.37
CAPN3-213ENST00000565173 VKORC1L1Q8N0U8 176 aa6.47□□□□□ -1.37
CAPN3-213ENST00000565173 DEFB125Q8N687 156 aa6.47□□□□□ -1.37
CAPN3-213ENST00000565173 ZNF645Q8N7E2 425 aa6.47□□□□□ -1.37
CAPN3-213ENST00000565173 NECAP1Q8NC96 275 aa6.47□□□□□ -1.37
CAPN3-213ENST00000565173 ACOT12Q8WYK0 555 aa6.47□□□□□ -1.37
CAPN3-213ENST00000565173 SPIN2AQ99865 258 aa6.47□□□□□ -1.37
CAPN3-213ENST00000565173 SPIN2BQ9BPZ2 258 aa6.47□□□□□ -1.37
CAPN3-213ENST00000565173 NEURL2Q9BR09 285 aa6.47□□□□□ -1.37
CAPN3-213ENST00000565173 CENPOQ9BU64 300 aa6.47□□□□□ -1.37
CAPN3-213ENST00000565173 MRPS26Q9BYN8 205 aaKnown RBP6.47□□□□□ -1.37
CAPN3-213ENST00000565173 PLEKHA3Q9HB20 300 aa6.47□□□□□ -1.37
CAPN3-213ENST00000565173 ZC4H2Q9NQZ6 224 aa6.47□□□□□ -1.37
CAPN3-213ENST00000565173 TXNL4BQ9NX01 149 aaKnown RBP6.47□□□□□ -1.37
CAPN3-213ENST00000565173 RBMX2Q9Y388 322 aaKnown RBP6.47□□□□□ -1.37
CAPN3-213ENST00000565173 CEPT1Q9Y6K0 416 aa6.47□□□□□ -1.37
CAPN3-213ENST00000565173 IGKV1D-13A0A0B4J2D9 117 aa6.46□□□□□ -1.38
CAPN3-213ENST00000565173 SMIM30A4D0T7 59 aa6.46□□□□□ -1.38
CAPN3-213ENST00000565173 C2orf70A6NJV1 201 aa6.46□□□□□ -1.38
CAPN3-213ENST00000565173 PPP5D1E7EU14 171 aa6.46□□□□□ -1.38
CAPN3-213ENST00000565173 LGALS9O00182 355 aa6.46□□□□□ -1.38
CAPN3-213ENST00000565173 MPPED1O15442 326 aa6.46□□□□□ -1.38
CAPN3-213ENST00000565173 OR2J3O76001 311 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms