RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 AKR1C2P52895 323 aa8.93□□□□□ -0.98
SF3B3-205ENST00000564899 KLF17Q5JT82 389 aaPredicted RBP8.93□□□□□ -0.98
SF3B3-205ENST00000564899 GGNBP1Q5YKI7 109 aa8.93□□□□□ -0.98
SF3B3-205ENST00000564899 BRD3OSQ6XYD6 125 aa8.93□□□□□ -0.98
SF3B3-205ENST00000564899 AKAP14Q86UN6 197 aa8.93□□□□□ -0.98
SF3B3-205ENST00000564899 PDPNQ86YL7 162 aa8.93□□□□□ -0.98
SF3B3-205ENST00000564899 DYNAPQ8N1N2 210 aa8.93□□□□□ -0.98
SF3B3-205ENST00000564899 RNASE11Q8TAA1 199 aaKnown RBP8.93□□□□□ -0.98
SF3B3-205ENST00000564899 MALSU1Q96EH3 234 aa8.93□□□□□ -0.98
SF3B3-205ENST00000564899 PLEKHA2Q9HB19 425 aa8.93□□□□□ -0.98
SF3B3-205ENST00000564899 COMMD9Q9P000 198 aa8.93□□□□□ -0.98
SF3B3-205ENST00000564899 WASHC3Q9Y3C0 194 aa8.93□□□□□ -0.98
SF3B3-205ENST00000564899 TMED3Q9Y3Q3 217 aa8.93□□□□□ -0.98
SF3B3-205ENST00000564899 C13orf42A0A1B0GVH6 325 aa8.92□□□□□ -0.98
SF3B3-205ENST00000564899 C5orf51A6NDU8 294 aa8.92□□□□□ -0.98
SF3B3-205ENST00000564899 PFDN1O60925 122 aa8.92□□□□□ -0.98
SF3B3-205ENST00000564899 IGKV1-16P04430 117 aa8.92□□□□□ -0.98
SF3B3-205ENST00000564899 HLA-GP17693 338 aa8.92□□□□□ -0.98
SF3B3-205ENST00000564899 VDAC1P21796 283 aa8.92□□□□□ -0.98
SF3B3-205ENST00000564899 PAX6P26367 422 aa8.92□□□□□ -0.98
SF3B3-205ENST00000564899 ERVK-16P61578 105 aa8.92□□□□□ -0.98
SF3B3-205ENST00000564899 CD83Q01151 205 aa8.92□□□□□ -0.98
SF3B3-205ENST00000564899 GSG1LQ6UXU4 331 aa8.92□□□□□ -0.98
SF3B3-205ENST00000564899 CFHR4Q92496 578 aa8.92□□□□□ -0.98
SF3B3-205ENST00000564899 R3HDM4Q96D70 268 aa8.92□□□□□ -0.98
SF3B3-205ENST00000564899 RBMXL1Q96E39 390 aaKnown RBP8.92□□□□□ -0.98
SF3B3-205ENST00000564899 RRNAD1Q96FB5 475 aaKnown RBP8.92□□□□□ -0.98
SF3B3-205ENST00000564899 AJUBAQ96IF1 538 aa8.92□□□□□ -0.98
SF3B3-205ENST00000564899 PDCD10Q9BUL8 212 aa8.92□□□□□ -0.98
SF3B3-205ENST00000564899 CHIAQ9BZP6 476 aa8.92□□□□□ -0.98
SF3B3-205ENST00000564899 ZNF436Q9C0F3 470 aaPredicted RBP8.92□□□□□ -0.98
SF3B3-205ENST00000564899 A0A0U1RQK1 487 aa8.91□□□□□ -0.98
SF3B3-205ENST00000564899 MARCH11A6NNE9 402 aa8.91□□□□□ -0.98
SF3B3-205ENST00000564899 MPTX1A8MV57 137 aa8.91□□□□□ -0.98
SF3B3-205ENST00000564899 SHOXO15266 292 aa8.91□□□□□ -0.98
SF3B3-205ENST00000564899 CCNKO75909 580 aa8.91□□□□□ -0.98
SF3B3-205ENST00000564899 KRASP01116 189 aa8.91□□□□□ -0.98
SF3B3-205ENST00000564899 FSHBP01225 129 aa8.91□□□□□ -0.98
SF3B3-205ENST00000564899 IGKV1-5P01602 117 aa8.91□□□□□ -0.98
SF3B3-205ENST00000564899 GIPP09681 153 aaPredicted RBP8.91□□□□□ -0.98
SF3B3-205ENST00000564899 NQO2P16083 231 aa8.91□□□□□ -0.98
SF3B3-205ENST00000564899 SRD5A1P18405 259 aa8.91□□□□□ -0.98
SF3B3-205ENST00000564899 CD1BP29016 333 aa8.91□□□□□ -0.98
SF3B3-205ENST00000564899 G6PCP35575 357 aa8.91□□□□□ -0.98
SF3B3-205ENST00000564899 H2BFSP57053 126 aa8.91□□□□□ -0.98
SF3B3-205ENST00000564899 BPIFB3P59826 476 aa8.91□□□□□ -0.98
SF3B3-205ENST00000564899 TMEM177Q53S58 311 aa8.91□□□□□ -0.98
SF3B3-205ENST00000564899 NMSQ5H8A3 153 aa8.91□□□□□ -0.98
SF3B3-205ENST00000564899 FAM120AOSQ5T036 256 aa8.91□□□□□ -0.98
SF3B3-205ENST00000564899 THOC7Q6I9Y2 204 aaKnown RBP8.91□□□□□ -0.98
SF3B3-205ENST00000564899 TEX29Q8N6K0 151 aa8.91□□□□□ -0.98
SF3B3-205ENST00000564899 DMBX1Q8NFW5 382 aa8.91□□□□□ -0.98
SF3B3-205ENST00000564899 OR4C13Q8NGP0 309 aa8.91□□□□□ -0.98
SF3B3-205ENST00000564899 OSR1Q8TAX0 266 aaPredicted RBP8.91□□□□□ -0.98
SF3B3-205ENST00000564899 NANPQ8TBE9 248 aa8.91□□□□□ -0.98
SF3B3-205ENST00000564899 FLYWCH2Q96CP2 140 aaKnown RBP8.91□□□□□ -0.98
SF3B3-205ENST00000564899 SEC22AQ96IW7 307 aa8.91□□□□□ -0.98
SF3B3-205ENST00000564899 HARBI1Q96MB7 349 aa8.91□□□□□ -0.98
SF3B3-205ENST00000564899 SPIN2AQ99865 258 aa8.91□□□□□ -0.98
SF3B3-205ENST00000564899 SPIN2BQ9BPZ2 258 aa8.91□□□□□ -0.98
SF3B3-205ENST00000564899 TMEM160Q9NX00 188 aa8.91□□□□□ -0.98
SF3B3-205ENST00000564899 FAM96BQ9Y3D0 163 aa8.91□□□□□ -0.98
SF3B3-205ENST00000564899 A0A0G2JRQ6 117 aa8.9□□□□□ -0.98
SF3B3-205ENST00000564899 VENTXO95231 258 aa8.9□□□□□ -0.98
SF3B3-205ENST00000564899 HRASP01112 189 aa8.9□□□□□ -0.98
SF3B3-205ENST00000564899 RPS16P62249 146 aaKnown RBP8.9□□□□□ -0.98
SF3B3-205ENST00000564899 HABP2Q14520 560 aaPredicted RBP8.9□□□□□ -0.98
SF3B3-205ENST00000564899 IAH1Q2TAA2 248 aaPredicted RBP8.9□□□□□ -0.98
SF3B3-205ENST00000564899 SSX9Q7RTT3 188 aa8.9□□□□□ -0.98
SF3B3-205ENST00000564899 FAM219AQ8IW50 185 aa8.9□□□□□ -0.98
SF3B3-205ENST00000564899 VKORC1L1Q8N0U8 176 aa8.9□□□□□ -0.98
SF3B3-205ENST00000564899 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.9□□□□□ -0.98
SF3B3-205ENST00000564899 LSM10Q969L4 123 aaKnown RBP8.9□□□□□ -0.98
SF3B3-205ENST00000564899 GPR146Q96CH1 333 aa8.9□□□□□ -0.98
SF3B3-205ENST00000564899 OR10C1Q96KK4 312 aa8.9□□□□□ -0.98
SF3B3-205ENST00000564899 C2orf50Q96LR7 162 aa8.9□□□□□ -0.98
SF3B3-205ENST00000564899 NEURL2Q9BR09 285 aa8.9□□□□□ -0.98
SF3B3-205ENST00000564899 MS4A7Q9GZW8 240 aaPredicted RBP8.9□□□□□ -0.98
SF3B3-205ENST00000564899 RANGRFQ9HD47 186 aaPredicted RBP8.9□□□□□ -0.98
SF3B3-205ENST00000564899 NUP50Q9UKX7 468 aa8.9□□□□□ -0.98
SF3B3-205ENST00000564899 MMP24Q9Y5R2 645 aa8.9□□□□□ -0.98
SF3B3-205ENST00000564899 OR2A4O95047 310 aa8.89□□□□□ -0.99
SF3B3-205ENST00000564899 IGKV1D-33P01593 117 aa8.89□□□□□ -0.99
SF3B3-205ENST00000564899 IGKV1-33P01594 117 aa8.89□□□□□ -0.99
SF3B3-205ENST00000564899 SNRNP70P08621 437 aaKnown RBP8.89□□□□□ -0.99
SF3B3-205ENST00000564899 FBP1P09467 338 aa8.89□□□□□ -0.99
SF3B3-205ENST00000564899 P0C879 139 aa8.89□□□□□ -0.99
SF3B3-205ENST00000564899 BRS3P32247 399 aa8.89□□□□□ -0.99
SF3B3-205ENST00000564899 HES1Q14469 280 aa8.89□□□□□ -0.99
SF3B3-205ENST00000564899 POU2AF1Q16633 256 aa8.89□□□□□ -0.99
SF3B3-205ENST00000564899 IZUMO4Q1ZYL8 232 aa8.89□□□□□ -0.99
SF3B3-205ENST00000564899 H2BFWTQ7Z2G1 175 aa8.89□□□□□ -0.99
SF3B3-205ENST00000564899 ZBTB8BQ8NAP8 495 aaPredicted RBP8.89□□□□□ -0.99
SF3B3-205ENST00000564899 ASB13Q8WXK3 278 aa8.89□□□□□ -0.99
SF3B3-205ENST00000564899 ST6GAL2Q96JF0 529 aa8.89□□□□□ -0.99
SF3B3-205ENST00000564899 RHOVQ96L33 236 aa8.89□□□□□ -0.99
SF3B3-205ENST00000564899 FYTTD1Q96QD9 318 aaKnown RBP8.89□□□□□ -0.99
SF3B3-205ENST00000564899 OR2A7Q96R45 310 aa8.89□□□□□ -0.99
SF3B3-205ENST00000564899 AIFM2Q9BRQ8 373 aa8.89□□□□□ -0.99
SF3B3-205ENST00000564899 RANBP3Q9H6Z4 567 aaPredicted RBP8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms