RNA–Protein interactions for RNA: ENST00000564726.5

RBBP6-208, Transcript of RB binding protein 6, ubiquitin ligase, human

TSL 3

Gene RBBP6, Length 514 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBBP6-208	ENST00000564726	MED10	Q9BTT4	135 aa		0.35	□□□□□ -2.35
RBBP6-208	ENST00000564726	ADAT1	Q9BUB4	502 aa	Known RBP	0.35	□□□□□ -2.35
RBBP6-208	ENST00000564726	NSRP1	Q9H0G5	558 aa	Known RBP	0.35	□□□□□ -2.35
RBBP6-208	ENST00000564726	TREM1	Q9NP99	234 aa		0.35	□□□□□ -2.35
RBBP6-208	ENST00000564726	MED9	Q9NWA0	146 aa		0.35	□□□□□ -2.35
RBBP6-208	ENST00000564726	TP53TG1	Q9Y2A0	90 aa		0.35	□□□□□ -2.35
RBBP6-208	ENST00000564726	RIMS2	Q9UQ26	1411 aa		0.35	□□□□□ -2.35
RBBP6-208	ENST00000564726	SMARCA4	P51532	1647 aa		0.35	□□□□□ -2.35
RBBP6-208	ENST00000564726	DIDO1	Q9BTC0	2240 aa	Known RBP	0.34	□□□□□ -2.35
RBBP6-208	ENST00000564726		A0A1W2PP64	1363 aa		0.34	□□□□□ -2.35
RBBP6-208	ENST00000564726	LRPPRC	P42704	1394 aa	Known RBP	0.34	□□□□□ -2.35
RBBP6-208	ENST00000564726	MUC5AC	P98088	5654 aa		0.34	□□□□□ -2.35
RBBP6-208	ENST00000564726	TRAV7	A0A075B6U4	112 aa		0.34	□□□□□ -2.36
RBBP6-208	ENST00000564726		A0A0J9YW62	118 aa		0.34	□□□□□ -2.36
RBBP6-208	ENST00000564726	TRAPPC13	A5PLN9	417 aa		0.34	□□□□□ -2.36
RBBP6-208	ENST00000564726		H3BT86	120 aa		0.34	□□□□□ -2.36
RBBP6-208	ENST00000564726		H7C2G1	150 aa		0.34	□□□□□ -2.36
RBBP6-208	ENST00000564726		K7ERQ8	282 aa		0.34	□□□□□ -2.36
RBBP6-208	ENST00000564726	TOX3	O15405	576 aa	Predicted RBP	0.34	□□□□□ -2.36
RBBP6-208	ENST00000564726	YKT6	O15498	198 aa		0.34	□□□□□ -2.36
RBBP6-208	ENST00000564726	NDUFS6	O75380	124 aa	Known RBP	0.34	□□□□□ -2.36
RBBP6-208	ENST00000564726	ATP6V1G2	O95670	118 aa		0.34	□□□□□ -2.36
RBBP6-208	ENST00000564726	ORM1	P02763	201 aa		0.34	□□□□□ -2.36
RBBP6-208	ENST00000564726	HLA-DQB2	P05538	268 aa		0.34	□□□□□ -2.36
RBBP6-208	ENST00000564726	RPSA	P08865	295 aa	Known RBP	0.34	□□□□□ -2.36
RBBP6-208	ENST00000564726	TFPT	P0C1Z6	253 aa		0.34	□□□□□ -2.36
RBBP6-208	ENST00000564726	CCL5	P13501	91 aa		0.34	□□□□□ -2.36
RBBP6-208	ENST00000564726	ALDH3A1	P30838	453 aa		0.34	□□□□□ -2.36
RBBP6-208	ENST00000564726	CD79B	P40259	229 aa		0.34	□□□□□ -2.36
RBBP6-208	ENST00000564726	RPL28	P46779	137 aa	Known RBP	0.34	□□□□□ -2.36
RBBP6-208	ENST00000564726	CLDN12	P56749	244 aa		0.34	□□□□□ -2.36
RBBP6-208	ENST00000564726	TAS2R20	P59543	309 aa		0.34	□□□□□ -2.36
RBBP6-208	ENST00000564726	RPS24	P62847	133 aa	Known RBP	0.34	□□□□□ -2.36
RBBP6-208	ENST00000564726	FKBP1A	P62942	108 aa	Known RBP	0.34	□□□□□ -2.36
RBBP6-208	ENST00000564726	HLA-DRB3	P79483	266 aa		0.34	□□□□□ -2.36
RBBP6-208	ENST00000564726	EMX1	Q04741	257 aa	Predicted RBP	0.34	□□□□□ -2.36
RBBP6-208	ENST00000564726	JOSD1	Q15040	202 aa	Predicted RBP	0.34	□□□□□ -2.36
RBBP6-208	ENST00000564726	SURF2	Q15527	256 aa	Predicted RBP	0.34	□□□□□ -2.36
RBBP6-208	ENST00000564726	DNAL1	Q4LDG9	190 aa		0.34	□□□□□ -2.36
RBBP6-208	ENST00000564726	FAM173B	Q6P4H8	233 aa		0.34	□□□□□ -2.36
RBBP6-208	ENST00000564726	CRLF3	Q8IUI8	442 aa		0.34	□□□□□ -2.36
RBBP6-208	ENST00000564726	INTS1	Q8N201	2190 aa	Known RBP	0.34	□□□□□ -2.36
RBBP6-208	ENST00000564726	LFNG	Q8NES3	379 aa		0.34	□□□□□ -2.36
RBBP6-208	ENST00000564726	RAB2B	Q8WUD1	216 aa		0.34	□□□□□ -2.36
RBBP6-208	ENST00000564726	ODF3	Q96PU9	254 aa		0.34	□□□□□ -2.36
RBBP6-208	ENST00000564726	TMEM109	Q9BVC6	243 aa		0.34	□□□□□ -2.36
RBBP6-208	ENST00000564726	OR52A5	Q9H2C5	316 aa		0.34	□□□□□ -2.36
RBBP6-208	ENST00000564726	TIMM9	Q9Y5J7	89 aa		0.34	□□□□□ -2.36
RBBP6-208	ENST00000564726	CUL9	Q8IWT3	2517 aa		0.34	□□□□□ -2.36
RBBP6-208	ENST00000564726	SCAF11	Q99590	1463 aa	Known RBP	0.34	□□□□□ -2.36
RBBP6-208	ENST00000564726	GLI3	P10071	1580 aa		0.33	□□□□□ -2.36
RBBP6-208	ENST00000564726	STRC	Q7RTU9	1775 aa		0.33	□□□□□ -2.36
RBBP6-208	ENST00000564726	TRAV38-1	A0A0B4J264	116 aa		0.33	□□□□□ -2.36
RBBP6-208	ENST00000564726	FTCDNL1	E5RQL4	147 aa		0.33	□□□□□ -2.36
RBBP6-208	ENST00000564726		F8VZ95	297 aa		0.33	□□□□□ -2.36
RBBP6-208	ENST00000564726	CCRL2	O00421	344 aa		0.33	□□□□□ -2.36
RBBP6-208	ENST00000564726	SCN2B	O60939	215 aa		0.33	□□□□□ -2.36
RBBP6-208	ENST00000564726	PSMB8	P28062	276 aa		0.33	□□□□□ -2.36
RBBP6-208	ENST00000564726	CCR7	P32248	378 aa		0.33	□□□□□ -2.36
RBBP6-208	ENST00000564726	RAB14	P61106	215 aa		0.33	□□□□□ -2.36
RBBP6-208	ENST00000564726	PMS2P3	Q13401	168 aa		0.33	□□□□□ -2.36
RBBP6-208	ENST00000564726	LRRC75B	Q2VPJ9	315 aa		0.33	□□□□□ -2.36
RBBP6-208	ENST00000564726	PLPPR5	Q32ZL2	321 aa		0.33	□□□□□ -2.36
RBBP6-208	ENST00000564726	ACSM3	Q53FZ2	586 aa		0.33	□□□□□ -2.36
RBBP6-208	ENST00000564726	RASSF6	Q6ZTQ3	369 aa		0.33	□□□□□ -2.36
RBBP6-208	ENST00000564726	KRTAP19-3	Q7Z4W3	81 aa		0.33	□□□□□ -2.36
RBBP6-208	ENST00000564726	SPERT	Q8NA61	448 aa		0.33	□□□□□ -2.36
RBBP6-208	ENST00000564726	C12orf43	Q96C57	262 aa	Known RBP	0.33	□□□□□ -2.36
RBBP6-208	ENST00000564726	LRRC45	Q96CN5	670 aa		0.33	□□□□□ -2.36
RBBP6-208	ENST00000564726	TMA16	Q96EY4	203 aa	Known RBP	0.33	□□□□□ -2.36
RBBP6-208	ENST00000564726	SLC22A4	Q9H015	551 aa		0.33	□□□□□ -2.36
RBBP6-208	ENST00000564726	MS4A6A	Q9H2W1	248 aa		0.33	□□□□□ -2.36
RBBP6-208	ENST00000564726	ZNHIT6	Q9NWK9	470 aa	Known RBP	0.33	□□□□□ -2.36
RBBP6-208	ENST00000564726	CHMP5	Q9NZZ3	219 aa		0.33	□□□□□ -2.36
RBBP6-208	ENST00000564726	C22orf24	Q9Y442	160 aa		0.33	□□□□□ -2.36
RBBP6-208	ENST00000564726	FLT4	P35916	1363 aa		0.32	□□□□□ -2.36
RBBP6-208	ENST00000564726	NUP160	Q12769	1436 aa		0.32	□□□□□ -2.36
RBBP6-208	ENST00000564726	TEX50	A0A1B0GTY4	177 aa		0.32	□□□□□ -2.36
RBBP6-208	ENST00000564726	TMEM213	A2RRL7	107 aa		0.32	□□□□□ -2.36
RBBP6-208	ENST00000564726	C5orf49	A4QMS7	147 aa		0.32	□□□□□ -2.36
RBBP6-208	ENST00000564726	OR51F1	A6NGY5	319 aa		0.32	□□□□□ -2.36
RBBP6-208	ENST00000564726	IBA57-AS1	B1ANH7	110 aa		0.32	□□□□□ -2.36
RBBP6-208	ENST00000564726	TRAPPC2L	H3BP13	241 aa		0.32	□□□□□ -2.36
RBBP6-208	ENST00000564726	ORC5	O43913	435 aa		0.32	□□□□□ -2.36
RBBP6-208	ENST00000564726	PPBP	P02775	128 aa		0.32	□□□□□ -2.36
RBBP6-208	ENST00000564726	IL6	P05231	212 aa		0.32	□□□□□ -2.36
RBBP6-208	ENST00000564726	EMP1	P54849	157 aa		0.32	□□□□□ -2.36
RBBP6-208	ENST00000564726	EBP	Q15125	230 aa	Known RBP	0.32	□□□□□ -2.36
RBBP6-208	ENST00000564726	ELOB	Q15370	118 aa		0.32	□□□□□ -2.36
RBBP6-208	ENST00000564726	SPATA24	Q86W54	205 aa		0.32	□□□□□ -2.36
RBBP6-208	ENST00000564726	GID4	Q8IVV7	300 aa		0.32	□□□□□ -2.36
RBBP6-208	ENST00000564726	ASB13	Q8WXK3	278 aa		0.32	□□□□□ -2.36
RBBP6-208	ENST00000564726	GNPNAT1	Q96EK6	184 aa	Predicted RBP	0.32	□□□□□ -2.36
RBBP6-208	ENST00000564726	CCL13	Q99616	98 aa		0.32	□□□□□ -2.36
RBBP6-208	ENST00000564726	TIPIN	Q9BVW5	301 aa		0.32	□□□□□ -2.36
RBBP6-208	ENST00000564726	CHST6	Q9GZX3	395 aa		0.32	□□□□□ -2.36
RBBP6-208	ENST00000564726	POLE	Q07864	2286 aa		0.32	□□□□□ -2.36
RBBP6-208	ENST00000564726	BRWD1	Q9NSI6	2320 aa		0.32	□□□□□ -2.36
RBBP6-208	ENST00000564726	TINCR	A0A1B0GVN0	87 aa		0.31	□□□□□ -2.36
RBBP6-208	ENST00000564726	TMEM269	A0A1B0GVZ9	245 aa		0.31	□□□□□ -2.36

Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms