RNA–Protein interactions for RNA: ENST00000563952.1

CMTM4-204, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-204ENST00000563952 TRGV3P03979 118 aa23.83■■□□□ 1.41
CMTM4-204ENST00000563952 PRSS3P35030 304 aa23.83■■□□□ 1.41
CMTM4-204ENST00000563952 ASPHD1Q5U4P2 390 aa23.83■■□□□ 1.41
CMTM4-204ENST00000563952 ZNF66Q6ZN08 573 aa23.83■■□□□ 1.41
CMTM4-204ENST00000563952 OR4S2Q8NH73 311 aa23.83■■□□□ 1.41
CMTM4-204ENST00000563952 ACOT12Q8WYK0 555 aa23.83■■□□□ 1.41
CMTM4-204ENST00000563952 SLA2Q9H6Q3 261 aa23.83■■□□□ 1.41
CMTM4-204ENST00000563952 EHFQ9NZC4 300 aa23.83■■□□□ 1.41
CMTM4-204ENST00000563952 SMIM31A0A1B0GVY4 71 aa23.82■■□□□ 1.4
CMTM4-204ENST00000563952 APOA1P02647 267 aa23.82■■□□□ 1.4
CMTM4-204ENST00000563952 LGALS1P09382 135 aaKnown RBP23.82■■□□□ 1.4
CMTM4-204ENST00000563952 APELAP0DMC3 54 aa23.82■■□□□ 1.4
CMTM4-204ENST00000563952 POC5Q8NA72 575 aa23.82■■□□□ 1.4
CMTM4-204ENST00000563952 SEC14L6B5MCN3 397 aa23.81■■□□□ 1.4
CMTM4-204ENST00000563952 HPGDSO60760 199 aa23.81■■□□□ 1.4
CMTM4-204ENST00000563952 TMEM17Q86X19 198 aa23.81■■□□□ 1.4
CMTM4-204ENST00000563952 VKORC1L1Q8N0U8 176 aa23.81■■□□□ 1.4
CMTM4-204ENST00000563952 GIMAP1Q8WWP7 306 aa23.81■■□□□ 1.4
CMTM4-204ENST00000563952 CMTM3Q96MX0 182 aa23.81■■□□□ 1.4
CMTM4-204ENST00000563952 ANAPC10Q9UM13 185 aa23.81■■□□□ 1.4
CMTM4-204ENST00000563952 MSGN1A6NI15 193 aa23.8■■□□□ 1.4
CMTM4-204ENST00000563952 PMP2P02689 132 aa23.8■■□□□ 1.4
CMTM4-204ENST00000563952 RFX2P48378 723 aa23.8■■□□□ 1.4
CMTM4-204ENST00000563952 HERV-K104P61576 105 aa23.8■■□□□ 1.4
CMTM4-204ENST00000563952 MSMO1Q15800 293 aa23.8■■□□□ 1.4
CMTM4-204ENST00000563952 GPR141Q7Z602 305 aa23.8■■□□□ 1.4
CMTM4-204ENST00000563952 TMEM68Q96MH6 324 aa23.8■■□□□ 1.4
CMTM4-204ENST00000563952 ZNF430Q9H8G1 570 aaPredicted RBP23.8■■□□□ 1.4
CMTM4-204ENST00000563952 DNAH3Q8TD57 4116 aa23.79■■□□□ 1.4
CMTM4-204ENST00000563952 K7EIL1 84 aa23.79■■□□□ 1.4
CMTM4-204ENST00000563952 CREBL2O60519 120 aaPredicted RBP23.79■■□□□ 1.4
CMTM4-204ENST00000563952 ELK1P19419 428 aa23.79■■□□□ 1.4
CMTM4-204ENST00000563952 BRWD1-AS2P59051 145 aa23.79■■□□□ 1.4
CMTM4-204ENST00000563952 C9orf66Q5T8R8 295 aa23.79■■□□□ 1.4
CMTM4-204ENST00000563952 SNX29P2Q8IUI4 249 aa23.79■■□□□ 1.4
CMTM4-204ENST00000563952 OR5H2Q8NGV7 314 aa23.79■■□□□ 1.4
CMTM4-204ENST00000563952 SRSF12Q8WXF0 261 aaKnown RBP23.79■■□□□ 1.4
CMTM4-204ENST00000563952 WI2-2373I1.2A0A1W2PRP0 233 aa23.78■■□□□ 1.4
CMTM4-204ENST00000563952 ACTL6BO94805 426 aa23.78■■□□□ 1.4
CMTM4-204ENST00000563952 TAS2R46P59540 309 aa23.78■■□□□ 1.4
CMTM4-204ENST00000563952 MZT2AQ6P582 158 aa23.78■■□□□ 1.4
CMTM4-204ENST00000563952 ZBTB34Q8NCN2 500 aa23.78■■□□□ 1.4
CMTM4-204ENST00000563952 COA4Q9NYJ1 87 aa23.78■■□□□ 1.4
CMTM4-204ENST00000563952 IGHV4OR15-8A0A075B7B6 117 aa23.77■■□□□ 1.4
CMTM4-204ENST00000563952 A0A087WW49 117 aa23.77■■□□□ 1.4
CMTM4-204ENST00000563952 FAM25AB3EWG3 89 aa23.77■■□□□ 1.4
CMTM4-204ENST00000563952 FAM25CB3EWG5 89 aa23.77■■□□□ 1.4
CMTM4-204ENST00000563952 FAM25GB3EWG6 89 aa23.77■■□□□ 1.4
CMTM4-204ENST00000563952 LINC01619G3V211 115 aa23.77■■□□□ 1.4
CMTM4-204ENST00000563952 H3BUA1 57 aa23.77■■□□□ 1.4
CMTM4-204ENST00000563952 MPPED1O15442 326 aa23.77■■□□□ 1.4
CMTM4-204ENST00000563952 NAT1P18440 290 aa23.77■■□□□ 1.4
CMTM4-204ENST00000563952 KIR2DS2P43631 304 aa23.77■■□□□ 1.4
CMTM4-204ENST00000563952 ALDH3B2P48448 385 aa23.77■■□□□ 1.4
CMTM4-204ENST00000563952 SLURP1P55000 103 aa23.77■■□□□ 1.4
CMTM4-204ENST00000563952 ZNF818PQ6ZRF7 136 aa23.77■■□□□ 1.4
CMTM4-204ENST00000563952 MMD2Q8IY49 270 aa23.77■■□□□ 1.4
CMTM4-204ENST00000563952 DCUN1D4Q92564 292 aa23.77■■□□□ 1.4
CMTM4-204ENST00000563952 AP3S1Q92572 193 aa23.77■■□□□ 1.4
CMTM4-204ENST00000563952 RHOVQ96L33 236 aa23.77■■□□□ 1.4
CMTM4-204ENST00000563952 C13orf42A0A1B0GVH6 325 aa23.76■■□□□ 1.39
CMTM4-204ENST00000563952 SULT1C2O00338 296 aa23.76■■□□□ 1.39
CMTM4-204ENST00000563952 DYRK1AQ13627 763 aa23.76■■□□□ 1.39
CMTM4-204ENST00000563952 GPX8Q8TED1 209 aa23.76■■□□□ 1.39
CMTM4-204ENST00000563952 ZNF2Q9BSG1 426 aaPredicted RBP23.76■■□□□ 1.39
CMTM4-204ENST00000563952 RAMP3O60896 148 aa23.75■■□□□ 1.39
CMTM4-204ENST00000563952 OR2A4O95047 310 aa23.75■■□□□ 1.39
CMTM4-204ENST00000563952 ZNF182P17025 639 aaPredicted RBP23.75■■□□□ 1.39
CMTM4-204ENST00000563952 HLA-DMAP28067 261 aa23.75■■□□□ 1.39
CMTM4-204ENST00000563952 DGCR2P98153 550 aa23.75■■□□□ 1.39
CMTM4-204ENST00000563952 C10orf55Q5SWW7 151 aa23.75■■□□□ 1.39
CMTM4-204ENST00000563952 DHRS11Q6UWP2 260 aa23.75■■□□□ 1.39
CMTM4-204ENST00000563952 SPAG16Q8N0X2 631 aa23.75■■□□□ 1.39
CMTM4-204ENST00000563952 VSTM2AQ8TAG5 236 aa23.75■■□□□ 1.39
CMTM4-204ENST00000563952 OR2A7Q96R45 310 aa23.75■■□□□ 1.39
CMTM4-204ENST00000563952 TNCP24821 2201 aa23.74■■□□□ 1.39
CMTM4-204ENST00000563952 DEFA5Q01523 94 aa23.74■■□□□ 1.39
CMTM4-204ENST00000563952 CATR1Q13166 79 aa23.74■■□□□ 1.39
CMTM4-204ENST00000563952 DEFB121Q5J5C9 76 aa23.74■■□□□ 1.39
CMTM4-204ENST00000563952 SSX9Q7RTT3 188 aa23.74■■□□□ 1.39
CMTM4-204ENST00000563952 LYSMD2Q8IV50 215 aa23.74■■□□□ 1.39
CMTM4-204ENST00000563952 DLX4Q92988 240 aaPredicted RBP23.74■■□□□ 1.39
CMTM4-204ENST00000563952 TINAGL1Q9GZM7 467 aaPredicted RBP23.74■■□□□ 1.39
CMTM4-204ENST00000563952 SCPEP1Q9HB40 452 aa23.74■■□□□ 1.39
CMTM4-204ENST00000563952 ZMAT5Q9UDW3 170 aaKnown RBP23.74■■□□□ 1.39
CMTM4-204ENST00000563952 OVOL1O14753 267 aa23.73■■□□□ 1.39
CMTM4-204ENST00000563952 KBTBD11O94819 623 aa23.73■■□□□ 1.39
CMTM4-204ENST00000563952 HRASP01112 189 aa23.73■■□□□ 1.39
CMTM4-204ENST00000563952 HSPB1P04792 205 aaKnown RBP23.73■■□□□ 1.39
CMTM4-204ENST00000563952 HRH1P35367 487 aa23.73■■□□□ 1.39
CMTM4-204ENST00000563952 OR51H1Q8NH63 302 aa23.73■■□□□ 1.39
CMTM4-204ENST00000563952 MOB3AQ96BX8 217 aa23.73■■□□□ 1.39
CMTM4-204ENST00000563952 SCOCQ9UIL1 159 aa23.73■■□□□ 1.39
CMTM4-204ENST00000563952 A0A0G2JLM5 398 aa23.72■■□□□ 1.39
CMTM4-204ENST00000563952 OR9G9P0C7N8 305 aa23.72■■□□□ 1.39
CMTM4-204ENST00000563952 AADACL3Q5VUY0 350 aa23.72■■□□□ 1.39
CMTM4-204ENST00000563952 PUSL1Q8N0Z8 303 aaKnown RBP23.72■■□□□ 1.39
CMTM4-204ENST00000563952 SPIN2AQ99865 258 aa23.72■■□□□ 1.39
CMTM4-204ENST00000563952 SPIN2BQ9BPZ2 258 aa23.72■■□□□ 1.39
CMTM4-204ENST00000563952 GNRHRP30968 328 aa23.71■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms