RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 SHOXO15266 292 aa5.56□□□□□ -1.52
HERPUD1-206ENST00000563343 MPPED1O15442 326 aa5.56□□□□□ -1.52
HERPUD1-206ENST00000563343 CD2P06729 351 aa5.56□□□□□ -1.52
HERPUD1-206ENST00000563343 PSMB6P28072 239 aa5.56□□□□□ -1.52
HERPUD1-206ENST00000563343 UBE2KP61086 200 aa5.56□□□□□ -1.52
HERPUD1-206ENST00000563343 PPP3R1P63098 170 aa5.56□□□□□ -1.52
HERPUD1-206ENST00000563343 MRPL28Q13084 256 aaKnown RBP5.56□□□□□ -1.52
HERPUD1-206ENST00000563343 MED22Q15528 200 aa5.56□□□□□ -1.52
HERPUD1-206ENST00000563343 C1orf134Q5TEV5 83 aa5.56□□□□□ -1.52
HERPUD1-206ENST00000563343 GLT8D1Q68CQ7 371 aa5.56□□□□□ -1.52
HERPUD1-206ENST00000563343 C6orf201Q7Z4U5 140 aa5.56□□□□□ -1.52
HERPUD1-206ENST00000563343 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.56□□□□□ -1.52
HERPUD1-206ENST00000563343 OR13C5Q8NGS8 318 aa5.56□□□□□ -1.52
HERPUD1-206ENST00000563343 ACOT12Q8WYK0 555 aa5.56□□□□□ -1.52
HERPUD1-206ENST00000563343 LGALS12Q96DT0 336 aa5.56□□□□□ -1.52
HERPUD1-206ENST00000563343 ZNF436Q9C0F3 470 aaPredicted RBP5.56□□□□□ -1.52
HERPUD1-206ENST00000563343 ZNF430Q9H8G1 570 aaPredicted RBP5.56□□□□□ -1.52
HERPUD1-206ENST00000563343 FLG2Q5D862 2391 aaPredicted RBP5.55□□□□□ -1.52
HERPUD1-206ENST00000563343 DEFB131BA0A096LNP1 70 aa5.55□□□□□ -1.52
HERPUD1-206ENST00000563343 TRBV6-6A0A0A6YYG2 114 aa5.55□□□□□ -1.52
HERPUD1-206ENST00000563343 TRBV5-5A0A0J9YX44 114 aa5.55□□□□□ -1.52
HERPUD1-206ENST00000563343 OR4C46A6NHA9 309 aa5.55□□□□□ -1.52
HERPUD1-206ENST00000563343 CRTAPO75718 401 aaPredicted RBP5.55□□□□□ -1.52
HERPUD1-206ENST00000563343 CRYGCP07315 174 aa5.55□□□□□ -1.52
HERPUD1-206ENST00000563343 GIG44P09565 113 aaPredicted RBP5.55□□□□□ -1.52
HERPUD1-206ENST00000563343 INAFM2P0DMQ5 153 aa5.55□□□□□ -1.52
HERPUD1-206ENST00000563343 ZBTB25P24278 435 aa5.55□□□□□ -1.52
HERPUD1-206ENST00000563343 HLA-DRB3P79483 266 aa5.55□□□□□ -1.52
HERPUD1-206ENST00000563343 TMEM187Q14656 261 aa5.55□□□□□ -1.52
HERPUD1-206ENST00000563343 C12orf74Q32Q52 190 aa5.55□□□□□ -1.52
HERPUD1-206ENST00000563343 VMA21Q3ZAQ7 101 aa5.55□□□□□ -1.52
HERPUD1-206ENST00000563343 SOHLH1Q5JUK2 328 aa5.55□□□□□ -1.52
HERPUD1-206ENST00000563343 AWAT2Q6E213 333 aa5.55□□□□□ -1.52
HERPUD1-206ENST00000563343 TMEM190Q8WZ59 177 aa5.55□□□□□ -1.52
HERPUD1-206ENST00000563343 ZNF414Q96IQ9 312 aa5.55□□□□□ -1.52
HERPUD1-206ENST00000563343 FYTTD1Q96QD9 318 aaKnown RBP5.55□□□□□ -1.52
HERPUD1-206ENST00000563343 SPIN2AQ99865 258 aa5.55□□□□□ -1.52
HERPUD1-206ENST00000563343 SPIN2BQ9BPZ2 258 aa5.55□□□□□ -1.52
HERPUD1-206ENST00000563343 NDUFAF3Q9BU61 184 aa5.55□□□□□ -1.52
HERPUD1-206ENST00000563343 SDHAF2Q9NX18 166 aa5.55□□□□□ -1.52
HERPUD1-206ENST00000563343 ERVK13-1Q9NX77 482 aa5.55□□□□□ -1.52
HERPUD1-206ENST00000563343 CELA1Q9UNI1 258 aa5.55□□□□□ -1.52
HERPUD1-206ENST00000563343 UFC1Q9Y3C8 167 aa5.55□□□□□ -1.52
HERPUD1-206ENST00000563343 X6R8D5 127 aa5.55□□□□□ -1.52
HERPUD1-206ENST00000563343 VPS13BQ7Z7G8 4022 aa5.55□□□□□ -1.52
HERPUD1-206ENST00000563343 FAT1Q14517 4588 aa5.55□□□□□ -1.52
HERPUD1-206ENST00000563343 IGLV11-55A0A075B6I3 123 aa5.54□□□□□ -1.52
HERPUD1-206ENST00000563343 IGHV3-35A0A0C4DH35 117 aa5.54□□□□□ -1.52
HERPUD1-206ENST00000563343 ZNF705EA8MWA4 302 aaPredicted RBP5.54□□□□□ -1.52
HERPUD1-206ENST00000563343 EPM2AB3EWF7 344 aa5.54□□□□□ -1.52
HERPUD1-206ENST00000563343 G3V2T6 193 aa5.54□□□□□ -1.52
HERPUD1-206ENST00000563343 BPNT1O95861 308 aa5.54□□□□□ -1.52
HERPUD1-206ENST00000563343 CA1P00915 261 aaPredicted RBP5.54□□□□□ -1.52
HERPUD1-206ENST00000563343 CLEC3BP05452 202 aa5.54□□□□□ -1.52
HERPUD1-206ENST00000563343 CTSDP07339 412 aaPredicted RBP5.54□□□□□ -1.52
HERPUD1-206ENST00000563343 IL6RP08887 468 aaPredicted RBP5.54□□□□□ -1.52
HERPUD1-206ENST00000563343 SAA1P0DJI8 122 aaPredicted RBP5.54□□□□□ -1.52
HERPUD1-206ENST00000563343 MYOD1P15172 320 aa5.54□□□□□ -1.52
HERPUD1-206ENST00000563343 GBX2P52951 348 aaPredicted RBP5.54□□□□□ -1.52
HERPUD1-206ENST00000563343 RPS11P62280 158 aaKnown RBP eCLIP5.54□□□□□ -1.52
HERPUD1-206ENST00000563343 SNRPGP62308 76 aaKnown RBP5.54□□□□□ -1.52
HERPUD1-206ENST00000563343 IRF3Q14653 427 aa5.54□□□□□ -1.52
HERPUD1-206ENST00000563343 CDK10Q15131 360 aa5.54□□□□□ -1.52
HERPUD1-206ENST00000563343 C21orf62-AS1Q17RA5 79 aa5.54□□□□□ -1.52
HERPUD1-206ENST00000563343 MOB1BQ7L9L4 216 aa5.54□□□□□ -1.52
HERPUD1-206ENST00000563343 SLC25A42Q86VD7 318 aa5.54□□□□□ -1.52
HERPUD1-206ENST00000563343 CDH26Q8IXH8 852 aa5.54□□□□□ -1.52
HERPUD1-206ENST00000563343 JAGN1Q8N5M9 183 aa5.54□□□□□ -1.52
HERPUD1-206ENST00000563343 ZNF502Q8TBZ5 544 aa5.54□□□□□ -1.52
HERPUD1-206ENST00000563343 TRUB1Q8WWH5 349 aaKnown RBP5.54□□□□□ -1.52
HERPUD1-206ENST00000563343 EEF1AKMT3Q96AZ1 226 aa5.54□□□□□ -1.52
HERPUD1-206ENST00000563343 HDHD3Q9BSH5 251 aaPredicted RBP5.54□□□□□ -1.52
HERPUD1-206ENST00000563343 C6orf62Q9GZU0 229 aaPredicted RBP5.54□□□□□ -1.52
HERPUD1-206ENST00000563343 IMPAD1Q9NX62 359 aa5.54□□□□□ -1.52
HERPUD1-206ENST00000563343 AASSQ9UDR5 926 aa5.54□□□□□ -1.52
HERPUD1-206ENST00000563343 ETV7Q9Y603 341 aa5.54□□□□□ -1.52
HERPUD1-206ENST00000563343 TRBV5-7A0A0A0MS05 114 aa5.53□□□□□ -1.52
HERPUD1-206ENST00000563343 TRBV7-1A0A0A6YYK4 115 aa5.53□□□□□ -1.52
HERPUD1-206ENST00000563343 C15orf61A6NNL5 157 aa5.53□□□□□ -1.52
HERPUD1-206ENST00000563343 LINC00473A8K010 186 aa5.53□□□□□ -1.52
HERPUD1-206ENST00000563343 OGG1O15527 345 aa5.53□□□□□ -1.52
HERPUD1-206ENST00000563343 CRYZL1O95825 349 aa5.53□□□□□ -1.52
HERPUD1-206ENST00000563343 IFNA10P01566 189 aa5.53□□□□□ -1.52
HERPUD1-206ENST00000563343 LIMS3P0CW19 117 aa5.53□□□□□ -1.52
HERPUD1-206ENST00000563343 LIMS4P0CW20 117 aa5.53□□□□□ -1.52
HERPUD1-206ENST00000563343 MIFP14174 115 aa5.53□□□□□ -1.52
HERPUD1-206ENST00000563343 AREGP15514 252 aa5.53□□□□□ -1.52
HERPUD1-206ENST00000563343 GABRB1P18505 474 aa5.53□□□□□ -1.52
HERPUD1-206ENST00000563343 HTR2CP28335 458 aa5.53□□□□□ -1.52
HERPUD1-206ENST00000563343 GPR183P32249 361 aa5.53□□□□□ -1.52
HERPUD1-206ENST00000563343 ATP6AP1Q15904 470 aa5.53□□□□□ -1.52
HERPUD1-206ENST00000563343 LAMTOR1Q6IAA8 161 aa5.53□□□□□ -1.52
HERPUD1-206ENST00000563343 RPL22L1Q6P5R6 122 aaKnown RBP5.53□□□□□ -1.52
HERPUD1-206ENST00000563343 ZNF767PQ75MW2 155 aa5.53□□□□□ -1.52
HERPUD1-206ENST00000563343 ZNF367Q7RTV3 350 aa5.53□□□□□ -1.52
HERPUD1-206ENST00000563343 SPATA24Q86W54 205 aa5.53□□□□□ -1.52
HERPUD1-206ENST00000563343 MMD2Q8IY49 270 aa5.53□□□□□ -1.52
HERPUD1-206ENST00000563343 SETD6Q8TBK2 473 aa5.53□□□□□ -1.52
HERPUD1-206ENST00000563343 MRPL48Q96GC5 212 aaKnown RBP5.53□□□□□ -1.52
HERPUD1-206ENST00000563343 NICN1Q9BSH3 213 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms