RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 ATG5Q9H1Y0 275 aa3.59□□□□□ -1.83
SMG1-206ENST00000562668 GAL3ST2Q9H3Q3 398 aa3.59□□□□□ -1.83
SMG1-206ENST00000562668 AUNIPQ9H7T9 357 aa3.59□□□□□ -1.83
SMG1-206ENST00000562668 Q9N2K0 584 aa3.59□□□□□ -1.83
SMG1-206ENST00000562668 IDI2-AS1Q9NZ38 188 aa3.59□□□□□ -1.83
SMG1-206ENST00000562668 CCDC59Q9P031 241 aaKnown RBP3.59□□□□□ -1.83
SMG1-206ENST00000562668 ZNRD1Q9P1U0 126 aa3.59□□□□□ -1.83
SMG1-206ENST00000562668 ANAPC10Q9UM13 185 aa3.59□□□□□ -1.83
SMG1-206ENST00000562668 FBN1P35555 2871 aaKnown RBP3.58□□□□□ -1.84
SMG1-206ENST00000562668 A0A075B6Q4 140 aa3.58□□□□□ -1.84
SMG1-206ENST00000562668 A0A087WW49 117 aa3.58□□□□□ -1.84
SMG1-206ENST00000562668 IGHV3-43A0A0B4J1X8 118 aa3.58□□□□□ -1.84
SMG1-206ENST00000562668 TEX13DA0A0J9YY54 714 aaPredicted RBP3.58□□□□□ -1.84
SMG1-206ENST00000562668 A0A1W2PRD5 423 aa3.58□□□□□ -1.84
SMG1-206ENST00000562668 A0A1W2PRF3 423 aa3.58□□□□□ -1.84
SMG1-206ENST00000562668 A0A1W2PRM7 423 aa3.58□□□□□ -1.84
SMG1-206ENST00000562668 METTL21EPA6NDL7 271 aa3.58□□□□□ -1.84
SMG1-206ENST00000562668 TMEM235A6NFC5 223 aa3.58□□□□□ -1.84
SMG1-206ENST00000562668 SERPINE3A8MV23 424 aa3.58□□□□□ -1.84
SMG1-206ENST00000562668 CLDN34H7C241 214 aa3.58□□□□□ -1.84
SMG1-206ENST00000562668 J3QR06 171 aa3.58□□□□□ -1.84
SMG1-206ENST00000562668 CTDSP2O14595 271 aa3.58□□□□□ -1.84
SMG1-206ENST00000562668 SLC31A2O15432 143 aa3.58□□□□□ -1.84
SMG1-206ENST00000562668 XRCC3O43542 346 aa3.58□□□□□ -1.84
SMG1-206ENST00000562668 HPGDSO60760 199 aa3.58□□□□□ -1.84
SMG1-206ENST00000562668 SCGB1D1O95968 90 aa3.58□□□□□ -1.84
SMG1-206ENST00000562668 HBZP02008 142 aa3.58□□□□□ -1.84
SMG1-206ENST00000562668 APOA1P02647 267 aa3.58□□□□□ -1.84
SMG1-206ENST00000562668 SCTP09683 121 aa3.58□□□□□ -1.84
SMG1-206ENST00000562668 IGHV3-43DP0DP04 118 aa3.58□□□□□ -1.84
SMG1-206ENST00000562668 PTHLHP12272 177 aa3.58□□□□□ -1.84
SMG1-206ENST00000562668 HNF1AP20823 631 aa3.58□□□□□ -1.84
SMG1-206ENST00000562668 COX7A1P24310 79 aa3.58□□□□□ -1.84
SMG1-206ENST00000562668 ARL3P36405 182 aa3.58□□□□□ -1.84
SMG1-206ENST00000562668 MNDAP41218 407 aa3.58□□□□□ -1.84
SMG1-206ENST00000562668 GLP1RP43220 463 aa3.58□□□□□ -1.84
SMG1-206ENST00000562668 RANBP1P43487 201 aa3.58□□□□□ -1.84
SMG1-206ENST00000562668 IER3P46695 156 aa3.58□□□□□ -1.84
SMG1-206ENST00000562668 RORCP51449 518 aa3.58□□□□□ -1.84
SMG1-206ENST00000562668 ZNF137PP52743 207 aa3.58□□□□□ -1.84
SMG1-206ENST00000562668 HLA-DRB3P79483 266 aa3.58□□□□□ -1.84
SMG1-206ENST00000562668 HTD2P86397 168 aa3.58□□□□□ -1.84
SMG1-206ENST00000562668 DIAPH2-AS1Q14236 149 aa3.58□□□□□ -1.84
SMG1-206ENST00000562668 GNMTQ14749 295 aa3.58□□□□□ -1.84
SMG1-206ENST00000562668 HLA-DRB5Q30154 266 aa3.58□□□□□ -1.84
SMG1-206ENST00000562668 KRTAP21-3Q3LHN1 58 aa3.58□□□□□ -1.84
SMG1-206ENST00000562668 Q3ZCU0 254 aa3.58□□□□□ -1.84
SMG1-206ENST00000562668 CDNFQ49AH0 187 aa3.58□□□□□ -1.84
SMG1-206ENST00000562668 MORN2Q502X0 79 aa3.58□□□□□ -1.84
SMG1-206ENST00000562668 CT45A1Q5HYN5 189 aa3.58□□□□□ -1.84
SMG1-206ENST00000562668 UBE2NLQ5JXB2 153 aa3.58□□□□□ -1.84
SMG1-206ENST00000562668 C6orf183Q5T699 404 aa3.58□□□□□ -1.84
SMG1-206ENST00000562668 GPR157Q5UAW9 335 aa3.58□□□□□ -1.84
SMG1-206ENST00000562668 HACD4Q5VWC8 232 aa3.58□□□□□ -1.84
SMG1-206ENST00000562668 TRAT1Q6PIZ9 186 aa3.58□□□□□ -1.84
SMG1-206ENST00000562668 SLC25A48Q6ZT89 311 aaKnown RBP3.58□□□□□ -1.84
SMG1-206ENST00000562668 ABHD12Q8N2K0 398 aa3.58□□□□□ -1.84
SMG1-206ENST00000562668 TEX29Q8N6K0 151 aa3.58□□□□□ -1.84
SMG1-206ENST00000562668 SAMD12Q8N8I0 201 aa3.58□□□□□ -1.84
SMG1-206ENST00000562668 ZNF565Q8N9K5 539 aa3.58□□□□□ -1.84
SMG1-206ENST00000562668 OR9G1Q8NH87 305 aa3.58□□□□□ -1.84
SMG1-206ENST00000562668 CT45A3Q8NHU0 189 aa3.58□□□□□ -1.84
SMG1-206ENST00000562668 ACOT12Q8WYK0 555 aa3.58□□□□□ -1.84
SMG1-206ENST00000562668 MAFIPQ8WZ33 124 aa3.58□□□□□ -1.84
SMG1-206ENST00000562668 LEAP2Q969E1 77 aa3.58□□□□□ -1.84
SMG1-206ENST00000562668 ARL11Q969Q4 196 aa3.58□□□□□ -1.84
SMG1-206ENST00000562668 PRAC1Q96KF2 57 aa3.58□□□□□ -1.84
SMG1-206ENST00000562668 ZNF251Q9BRH9 671 aa3.58□□□□□ -1.84
SMG1-206ENST00000562668 AGMATQ9BSE5 352 aa3.58□□□□□ -1.84
SMG1-206ENST00000562668 SUCNR1Q9BXA5 334 aa3.58□□□□□ -1.84
SMG1-206ENST00000562668 CLEC7AQ9BXN2 247 aa3.58□□□□□ -1.84
SMG1-206ENST00000562668 PARP12Q9H0J9 701 aaKnown RBP3.58□□□□□ -1.84
SMG1-206ENST00000562668 RIMS4Q9H426 269 aaPredicted RBP3.58□□□□□ -1.84
SMG1-206ENST00000562668 HEXA-AS1Q9H8Q6 139 aa3.58□□□□□ -1.84
SMG1-206ENST00000562668 TAF9BQ9HBM6 251 aa3.58□□□□□ -1.84
SMG1-206ENST00000562668 C12orf4Q9NQ89 552 aa3.58□□□□□ -1.84
SMG1-206ENST00000562668 PLEKHJ1Q9NW61 149 aa3.58□□□□□ -1.84
SMG1-206ENST00000562668 COMMD3Q9UBI1 195 aa3.58□□□□□ -1.84
SMG1-206ENST00000562668 ZNF230Q9UIE0 474 aaPredicted RBP3.58□□□□□ -1.84
SMG1-206ENST00000562668 PSG11Q9UQ72 335 aa3.58□□□□□ -1.84
SMG1-206ENST00000562668 TBL2Q9Y4P3 447 aaKnown RBP3.58□□□□□ -1.84
SMG1-206ENST00000562668 IGHV4-4A0A075B6R2 117 aa3.57□□□□□ -1.84
SMG1-206ENST00000562668 TRAV18A0A075B6X5 111 aa3.57□□□□□ -1.84
SMG1-206ENST00000562668 TRBV6-7A0A0A0MS04 114 aa3.57□□□□□ -1.84
SMG1-206ENST00000562668 SMIM31A0A1B0GVY4 71 aa3.57□□□□□ -1.84
SMG1-206ENST00000562668 A0A1W2PPE3 182 aa3.57□□□□□ -1.84
SMG1-206ENST00000562668 VGLL3A8MV65 326 aa3.57□□□□□ -1.84
SMG1-206ENST00000562668 TRDCB7Z8K6 153 aa3.57□□□□□ -1.84
SMG1-206ENST00000562668 BUB1B-PAK6H3BSN5 160 aa3.57□□□□□ -1.84
SMG1-206ENST00000562668 SDCBPO00560 298 aaPredicted RBP3.57□□□□□ -1.84
SMG1-206ENST00000562668 ITGB1BP1O14713 200 aa3.57□□□□□ -1.84
SMG1-206ENST00000562668 YPEL1O60688 119 aa3.57□□□□□ -1.84
SMG1-206ENST00000562668 SCGNO76038 276 aa3.57□□□□□ -1.84
SMG1-206ENST00000562668 DIRAS3O95661 229 aa3.57□□□□□ -1.84
SMG1-206ENST00000562668 IGHV4-59P01825 116 aa3.57□□□□□ -1.84
SMG1-206ENST00000562668 CD3GP09693 182 aa3.57□□□□□ -1.84
SMG1-206ENST00000562668 GSTT2P0CG29 244 aa3.57□□□□□ -1.84
SMG1-206ENST00000562668 GSTT2BP0CG30 244 aa3.57□□□□□ -1.84
SMG1-206ENST00000562668 GATA1P15976 413 aaPredicted RBP3.57□□□□□ -1.84
SMG1-206ENST00000562668 DTYMKP23919 212 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms