RNA–Protein interactions for RNA: ENST00000562626.1

CLK3-208, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-208ENST00000562626 PIGPP57054 158 aa7.71□□□□□ -1.18
CLK3-208ENST00000562626 RTL8BQ17RB0 113 aa7.71□□□□□ -1.18
CLK3-208ENST00000562626 TRIQKQ629K1 86 aa7.71□□□□□ -1.18
CLK3-208ENST00000562626 C11orf44Q8N8P7 122 aa7.71□□□□□ -1.18
CLK3-208ENST00000562626 OR8H1Q8NGG4 311 aa7.71□□□□□ -1.18
CLK3-208ENST00000562626 OR2T6Q8NHC8 308 aa7.71□□□□□ -1.18
CLK3-208ENST00000562626 TP53RKQ96S44 253 aa7.71□□□□□ -1.18
CLK3-208ENST00000562626 RASL11BQ9BPW5 248 aa7.71□□□□□ -1.18
CLK3-208ENST00000562626 BEX1Q9HBH7 125 aa7.71□□□□□ -1.18
CLK3-208ENST00000562626 PRR13Q9NZ81 148 aa7.71□□□□□ -1.18
CLK3-208ENST00000562626 TBC1D24Q9ULP9 559 aa7.71□□□□□ -1.18
CLK3-208ENST00000562626 A0A1B0GW64 132 aa7.7□□□□□ -1.18
CLK3-208ENST00000562626 G3V318 75 aa7.7□□□□□ -1.18
CLK3-208ENST00000562626 M0QZK8 103 aa7.7□□□□□ -1.18
CLK3-208ENST00000562626 ATP6V0E1O15342 81 aa7.7□□□□□ -1.18
CLK3-208ENST00000562626 MPPED1O15442 326 aa7.7□□□□□ -1.18
CLK3-208ENST00000562626 RRASP10301 218 aa7.7□□□□□ -1.18
CLK3-208ENST00000562626 F2RP25116 425 aa7.7□□□□□ -1.18
CLK3-208ENST00000562626 LPAR6P43657 344 aa7.7□□□□□ -1.18
CLK3-208ENST00000562626 RND3P61587 244 aa7.7□□□□□ -1.18
CLK3-208ENST00000562626 CATR1Q13166 79 aa7.7□□□□□ -1.18
CLK3-208ENST00000562626 SP6Q3SY56 376 aa7.7□□□□□ -1.18
CLK3-208ENST00000562626 TCTEX1D4Q5JR98 221 aa7.7□□□□□ -1.18
CLK3-208ENST00000562626 C10orf55Q5SWW7 151 aa7.7□□□□□ -1.18
CLK3-208ENST00000562626 SSX9Q7RTT3 188 aa7.7□□□□□ -1.18
CLK3-208ENST00000562626 SLC35E3Q7Z769 313 aa7.7□□□□□ -1.18
CLK3-208ENST00000562626 PUSL1Q8N0Z8 303 aaKnown RBP7.7□□□□□ -1.18
CLK3-208ENST00000562626 OR4S2Q8NH73 311 aa7.7□□□□□ -1.18
CLK3-208ENST00000562626 LHFPL5Q8TAF8 219 aa7.7□□□□□ -1.18
CLK3-208ENST00000562626 OSR1Q8TAX0 266 aaPredicted RBP7.7□□□□□ -1.18
CLK3-208ENST00000562626 TSNAXQ99598 290 aaKnown RBP7.7□□□□□ -1.18
CLK3-208ENST00000562626 RNF5Q99942 180 aa7.7□□□□□ -1.18
CLK3-208ENST00000562626 PRRT1Q99946 306 aa7.7□□□□□ -1.18
CLK3-208ENST00000562626 FAM103A1Q9BTL3 118 aaKnown RBP7.7□□□□□ -1.18
CLK3-208ENST00000562626 PRELID3BQ9Y3B1 194 aa7.7□□□□□ -1.18
CLK3-208ENST00000562626 VWFP04275 2813 aa7.69□□□□□ -1.18
CLK3-208ENST00000562626 E7EUB6 86 aa7.69□□□□□ -1.18
CLK3-208ENST00000562626 RBFOX2O43251 390 aaKnown RBP eCLIP7.69□□□□□ -1.18
CLK3-208ENST00000562626 SPDEFO95238 335 aa7.69□□□□□ -1.18
CLK3-208ENST00000562626 IL6RP08887 468 aaPredicted RBP7.69□□□□□ -1.18
CLK3-208ENST00000562626 CD28P10747 220 aa7.69□□□□□ -1.18
CLK3-208ENST00000562626 UBE2KP61086 200 aa7.69□□□□□ -1.18
CLK3-208ENST00000562626 SUPT4H1P63272 117 aaKnown RBP7.69□□□□□ -1.18
CLK3-208ENST00000562626 CX3CL1P78423 397 aa7.69□□□□□ -1.18
CLK3-208ENST00000562626 CFHR3Q02985 330 aa7.69□□□□□ -1.18
CLK3-208ENST00000562626 ZNF846Q147U1 533 aa7.69□□□□□ -1.18
CLK3-208ENST00000562626 IZUMO4Q1ZYL8 232 aa7.69□□□□□ -1.18
CLK3-208ENST00000562626 C19orf54Q5BKX5 351 aa7.69□□□□□ -1.18
CLK3-208ENST00000562626 ARSJQ5FYB0 599 aaPredicted RBP7.69□□□□□ -1.18
CLK3-208ENST00000562626 OR4A47Q6IF82 309 aa7.69□□□□□ -1.18
CLK3-208ENST00000562626 LIN54Q6MZP7 749 aa7.69□□□□□ -1.18
CLK3-208ENST00000562626 LPCAT3Q6P1A2 487 aa7.69□□□□□ -1.18
CLK3-208ENST00000562626 C12orf54Q6X4T0 127 aa7.69□□□□□ -1.18
CLK3-208ENST00000562626 LCNL1Q6ZST4 164 aa7.69□□□□□ -1.18
CLK3-208ENST00000562626 ZNF329Q86UD4 541 aa7.69□□□□□ -1.18
CLK3-208ENST00000562626 PPP1R27Q86WC6 154 aa7.69□□□□□ -1.18
CLK3-208ENST00000562626 CMTM1Q8IZ96 169 aa7.69□□□□□ -1.18
CLK3-208ENST00000562626 S100ZQ8WXG8 99 aa7.69□□□□□ -1.18
CLK3-208ENST00000562626 ZNF486Q96H40 463 aaPredicted RBP7.69□□□□□ -1.18
CLK3-208ENST00000562626 OR51J1Q9H342 316 aa7.69□□□□□ -1.18
CLK3-208ENST00000562626 ZNF430Q9H8G1 570 aaPredicted RBP7.69□□□□□ -1.18
CLK3-208ENST00000562626 PARP11Q9NR21 331 aa7.69□□□□□ -1.18
CLK3-208ENST00000562626 KIAA1456Q9P272 454 aa7.69□□□□□ -1.18
CLK3-208ENST00000562626 FLVCR2Q9UPI3 526 aa7.69□□□□□ -1.18
CLK3-208ENST00000562626 WSB1Q9Y6I7 421 aa7.69□□□□□ -1.18
CLK3-208ENST00000562626 A0A0G2JRQ6 117 aa7.68□□□□□ -1.18
CLK3-208ENST00000562626 CRYM-AS1A6NIL9 109 aa7.68□□□□□ -1.18
CLK3-208ENST00000562626 CGB1A6NKQ9 187 aa7.68□□□□□ -1.18
CLK3-208ENST00000562626 DBX1A6NMT0 343 aa7.68□□□□□ -1.18
CLK3-208ENST00000562626 ADARB2-AS1A8MUL3 147 aa7.68□□□□□ -1.18
CLK3-208ENST00000562626 H0Y980 276 aa7.68□□□□□ -1.18
CLK3-208ENST00000562626 SOX15O60248 233 aa7.68□□□□□ -1.18
CLK3-208ENST00000562626 KBTBD11O94819 623 aa7.68□□□□□ -1.18
CLK3-208ENST00000562626 HPRT1P00492 218 aa7.68□□□□□ -1.18
CLK3-208ENST00000562626 IGKV1-5P01602 117 aa7.68□□□□□ -1.18
CLK3-208ENST00000562626 OR5AC1P0C628 307 aa7.68□□□□□ -1.18
CLK3-208ENST00000562626 OR9G9P0C7N8 305 aa7.68□□□□□ -1.18
CLK3-208ENST00000562626 APELAP0DMC3 54 aa7.68□□□□□ -1.18
CLK3-208ENST00000562626 G6PCP35575 357 aa7.68□□□□□ -1.18
CLK3-208ENST00000562626 KIR2DS2P43631 304 aa7.68□□□□□ -1.18
CLK3-208ENST00000562626 LGALS7P47929 136 aa7.68□□□□□ -1.18
CLK3-208ENST00000562626 AP3S2P59780 193 aa7.68□□□□□ -1.18
CLK3-208ENST00000562626 PLGLAQ15195 96 aa7.68□□□□□ -1.18
CLK3-208ENST00000562626 SURF2Q15527 256 aaPredicted RBP7.68□□□□□ -1.18
CLK3-208ENST00000562626 POU2AF1Q16633 256 aa7.68□□□□□ -1.18
CLK3-208ENST00000562626 PRSS8Q16651 343 aa7.68□□□□□ -1.18
CLK3-208ENST00000562626 ASPHD1Q5U4P2 390 aa7.68□□□□□ -1.18
CLK3-208ENST00000562626 STPG2Q8N412 459 aa7.68□□□□□ -1.18
CLK3-208ENST00000562626 ZFAND1Q8TCF1 268 aa7.68□□□□□ -1.18
CLK3-208ENST00000562626 CASTOR1Q8WTX7 329 aa7.68□□□□□ -1.18
CLK3-208ENST00000562626 R3HDM4Q96D70 268 aa7.68□□□□□ -1.18
CLK3-208ENST00000562626 RHOVQ96L33 236 aa7.68□□□□□ -1.18
CLK3-208ENST00000562626 CITED1Q99966 193 aa7.68□□□□□ -1.18
CLK3-208ENST00000562626 CCDC32Q9BV29 185 aa7.68□□□□□ -1.18
CLK3-208ENST00000562626 ZNF747Q9BV97 191 aa7.68□□□□□ -1.18
CLK3-208ENST00000562626 WDR12Q9GZL7 423 aaKnown RBP7.68□□□□□ -1.18
CLK3-208ENST00000562626 NAA60Q9H7X0 242 aa7.68□□□□□ -1.18
CLK3-208ENST00000562626 COPZ2Q9P299 210 aa7.68□□□□□ -1.18
CLK3-208ENST00000562626 SCP2D1Q9UJQ7 156 aa7.68□□□□□ -1.18
CLK3-208ENST00000562626 TRRAPQ9Y4A5 3859 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms