RNA–Protein interactions for RNA: ENST00000561869.1

CHD9-204, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-204ENST00000561869 FAM231AP0DMU4 169 aa0.75□□□□□ -2.29
CHD9-204ENST00000561869 FAM231CP0DMU5 169 aa0.75□□□□□ -2.29
CHD9-204ENST00000561869 RPS12P25398 132 aaKnown RBP0.75□□□□□ -2.29
CHD9-204ENST00000561869 CD200P41217 278 aa0.75□□□□□ -2.29
CHD9-204ENST00000561869 RPL27AP46776 148 aaKnown RBP0.75□□□□□ -2.29
CHD9-204ENST00000561869 GABRA2P47869 451 aa0.75□□□□□ -2.29
CHD9-204ENST00000561869 MARCKSL1P49006 195 aa0.75□□□□□ -2.29
CHD9-204ENST00000561869 TAS2R30P59541 319 aa0.75□□□□□ -2.29
CHD9-204ENST00000561869 RAB5BP61020 215 aa0.75□□□□□ -2.29
CHD9-204ENST00000561869 NAA20P61599 178 aa0.75□□□□□ -2.29
CHD9-204ENST00000561869 TBPL1P62380 186 aa0.75□□□□□ -2.29
CHD9-204ENST00000561869 OR2F1Q13607 317 aa0.75□□□□□ -2.29
CHD9-204ENST00000561869 BATFQ16520 125 aa0.75□□□□□ -2.29
CHD9-204ENST00000561869 RGS21Q2M5E4 152 aa0.75□□□□□ -2.29
CHD9-204ENST00000561869 C1orf195Q5TG92 126 aa0.75□□□□□ -2.29
CHD9-204ENST00000561869 SYPL2Q5VXT5 272 aa0.75□□□□□ -2.29
CHD9-204ENST00000561869 OR10K2Q6IF99 312 aa0.75□□□□□ -2.29
CHD9-204ENST00000561869 DEFB125Q8N687 156 aa0.75□□□□□ -2.29
CHD9-204ENST00000561869 ZNF283Q8N7M2 679 aa0.75□□□□□ -2.29
CHD9-204ENST00000561869 DAND5Q8N907 189 aa0.75□□□□□ -2.29
CHD9-204ENST00000561869 OR1M1Q8NGA1 313 aa0.75□□□□□ -2.29
CHD9-204ENST00000561869 OR8J2Q8NGG1 315 aa0.75□□□□□ -2.29
CHD9-204ENST00000561869 SGMS2Q8NHU3 365 aa0.75□□□□□ -2.29
CHD9-204ENST00000561869 RPS4Y2Q8TD47 263 aa0.75□□□□□ -2.29
CHD9-204ENST00000561869 SMCR5Q8TEV8 140 aa0.75□□□□□ -2.29
CHD9-204ENST00000561869 ASB17Q8WXJ9 295 aa0.75□□□□□ -2.29
CHD9-204ENST00000561869 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP0.75□□□□□ -2.29
CHD9-204ENST00000561869 GNPNAT1Q96EK6 184 aaPredicted RBP0.75□□□□□ -2.29
CHD9-204ENST00000561869 TMA16Q96EY4 203 aaKnown RBP0.75□□□□□ -2.29
CHD9-204ENST00000561869 SFRP2Q96HF1 295 aa0.75□□□□□ -2.29
CHD9-204ENST00000561869 HRASLSQ9HDD0 168 aa0.75□□□□□ -2.29
CHD9-204ENST00000561869 XPNPEP1Q9NQW7 623 aa0.75□□□□□ -2.29
CHD9-204ENST00000561869 TAAR3PQ9P1P4 343 aa0.75□□□□□ -2.29
CHD9-204ENST00000561869 ANAPC10Q9UM13 185 aa0.75□□□□□ -2.29
CHD9-204ENST00000561869 NYNRINQ9P2P1 1898 aaKnown RBP0.75□□□□□ -2.29
CHD9-204ENST00000561869 DCCP43146 1447 aa0.74□□□□□ -2.29
CHD9-204ENST00000561869 SCN9AQ15858 1988 aa0.74□□□□□ -2.29
CHD9-204ENST00000561869 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP0.74□□□□□ -2.29
CHD9-204ENST00000561869 TRGV5A0A0B4J1U4 118 aa0.74□□□□□ -2.29
CHD9-204ENST00000561869 IGHV1-69-2A0A0G2JMI3 117 aa0.74□□□□□ -2.29
CHD9-204ENST00000561869 OR4C45A6NMZ5 311 aa0.74□□□□□ -2.29
CHD9-204ENST00000561869 C2orf74A8MZ97 194 aa0.74□□□□□ -2.29
CHD9-204ENST00000561869 LST1O00453 97 aa0.74□□□□□ -2.29
CHD9-204ENST00000561869 UBE2L6O14933 153 aa0.74□□□□□ -2.29
CHD9-204ENST00000561869 TRAPPC3O43617 180 aa0.74□□□□□ -2.29
CHD9-204ENST00000561869 CALB1P05937 261 aa0.74□□□□□ -2.29
CHD9-204ENST00000561869 OR5G3P0C626 314 aa0.74□□□□□ -2.29
CHD9-204ENST00000561869 CCL5P13501 91 aa0.74□□□□□ -2.29
CHD9-204ENST00000561869 UCHL3P15374 230 aa0.74□□□□□ -2.29
CHD9-204ENST00000561869 CCR7P32248 378 aa0.74□□□□□ -2.29
CHD9-204ENST00000561869 RSU1Q15404 277 aa0.74□□□□□ -2.29
CHD9-204ENST00000561869 HIST3H3Q16695 136 aa0.74□□□□□ -2.29
CHD9-204ENST00000561869 LRRC75BQ2VPJ9 315 aa0.74□□□□□ -2.29
CHD9-204ENST00000561869 TNFAIP8L3Q5GJ75 292 aa0.74□□□□□ -2.29
CHD9-204ENST00000561869 CCDC122Q5T0U0 273 aa0.74□□□□□ -2.29
CHD9-204ENST00000561869 C5orf46Q6UWT4 87 aa0.74□□□□□ -2.29
CHD9-204ENST00000561869 ALKAL1Q6UXT8 129 aa0.74□□□□□ -2.29
CHD9-204ENST00000561869 RASSF6Q6ZTQ3 369 aa0.74□□□□□ -2.29
CHD9-204ENST00000561869 SLC51BQ86UW2 128 aa0.74□□□□□ -2.29
CHD9-204ENST00000561869 GID4Q8IVV7 300 aa0.74□□□□□ -2.29
CHD9-204ENST00000561869 UMODL1-AS1Q8N2C9 162 aa0.74□□□□□ -2.29
CHD9-204ENST00000561869 SLC22A24Q8N4F4 322 aa0.74□□□□□ -2.29
CHD9-204ENST00000561869 TMEM86BQ8N661 226 aa0.74□□□□□ -2.29
CHD9-204ENST00000561869 OR2T27Q8NH04 317 aa0.74□□□□□ -2.29
CHD9-204ENST00000561869 RNASE11Q8TAA1 199 aaKnown RBP0.74□□□□□ -2.29
CHD9-204ENST00000561869 RAB2BQ8WUD1 216 aa0.74□□□□□ -2.29
CHD9-204ENST00000561869 MIEN1Q9BRT3 115 aa0.74□□□□□ -2.29
CHD9-204ENST00000561869 TTTY13Q9BZ97 58 aa0.74□□□□□ -2.29
CHD9-204ENST00000561869 OR51I1Q9H343 314 aa0.74□□□□□ -2.29
CHD9-204ENST00000561869 UCK1Q9HA47 277 aa0.74□□□□□ -2.29
CHD9-204ENST00000561869 TMEM106BQ9NUM4 274 aa0.74□□□□□ -2.29
CHD9-204ENST00000561869 AK3Q9UIJ7 227 aa0.74□□□□□ -2.29
CHD9-204ENST00000561869 GUCA1BQ9UMX6 200 aa0.74□□□□□ -2.29
CHD9-204ENST00000561869 RBM7Q9Y580 266 aaKnown RBP0.74□□□□□ -2.29
CHD9-204ENST00000561869 MPDZO75970 2070 aa0.74□□□□□ -2.29
CHD9-204ENST00000561869 KIAA2026Q5HYC2 2103 aa0.73□□□□□ -2.29
CHD9-204ENST00000561869 MDC1Q14676 2089 aaKnown RBP0.73□□□□□ -2.29
CHD9-204ENST00000561869 A0A1W2PQD3 144 aa0.73□□□□□ -2.29
CHD9-204ENST00000561869 SMIM23A6NLE4 172 aa0.73□□□□□ -2.29
CHD9-204ENST00000561869 A8MUN3 132 aa0.73□□□□□ -2.29
CHD9-204ENST00000561869 M0R036 132 aa0.73□□□□□ -2.29
CHD9-204ENST00000561869 KCNK1O00180 336 aa0.73□□□□□ -2.29
CHD9-204ENST00000561869 BHLHE40O14503 412 aa0.73□□□□□ -2.29
CHD9-204ENST00000561869 UCHL1P09936 223 aa0.73□□□□□ -2.29
CHD9-204ENST00000561869 HIST1H1EP10412 219 aaKnown RBP0.73□□□□□ -2.29
CHD9-204ENST00000561869 ALDH3A1P30838 453 aa0.73□□□□□ -2.29
CHD9-204ENST00000561869 CDK9P50750 372 aaKnown RBP0.73□□□□□ -2.29
CHD9-204ENST00000561869 TAS2R20P59543 309 aa0.73□□□□□ -2.29
CHD9-204ENST00000561869 PRDX4Q13162 271 aa0.73□□□□□ -2.29
CHD9-204ENST00000561869 MIAQ16674 131 aa0.73□□□□□ -2.29
CHD9-204ENST00000561869 ACSM3Q53FZ2 586 aa0.73□□□□□ -2.29
CHD9-204ENST00000561869 PABPC1L2AQ5JQF8 200 aa0.73□□□□□ -2.29
CHD9-204ENST00000561869 FAM201AQ5SY85 155 aa0.73□□□□□ -2.29
CHD9-204ENST00000561869 LPCAT4Q643R3 524 aa0.73□□□□□ -2.29
CHD9-204ENST00000561869 Q6ZRN7 208 aaPredicted RBP0.73□□□□□ -2.29
CHD9-204ENST00000561869 GLT6D1Q7Z4J2 308 aa0.73□□□□□ -2.29
CHD9-204ENST00000561869 DCXRQ7Z4W1 244 aa0.73□□□□□ -2.29
CHD9-204ENST00000561869 LHFPL1Q86WI0 220 aa0.73□□□□□ -2.29
CHD9-204ENST00000561869 DYNAPQ8N1N2 210 aa0.73□□□□□ -2.29
CHD9-204ENST00000561869 SLC35F6Q8N357 371 aa0.73□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms