RNA–Protein interactions for RNA: ENST00000561253.5

LRRC28-220, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-220ENST00000561253 MDFIC2A0A1B0GVS7 189 aa4.74□□□□□ -1.65
LRRC28-220ENST00000561253 A0A1W2PN81 502 aa4.74□□□□□ -1.65
LRRC28-220ENST00000561253 MEIOCA2RUB1 952 aa4.74□□□□□ -1.65
LRRC28-220ENST00000561253 VGLL3A8MV65 326 aa4.74□□□□□ -1.65
LRRC28-220ENST00000561253 NPFFO15130 113 aa4.74□□□□□ -1.65
LRRC28-220ENST00000561253 SLC31A2O15432 143 aa4.74□□□□□ -1.65
LRRC28-220ENST00000561253 SCGNO76038 276 aa4.74□□□□□ -1.65
LRRC28-220ENST00000561253 DIRAS3O95661 229 aa4.74□□□□□ -1.65
LRRC28-220ENST00000561253 TSHBP01222 138 aa4.74□□□□□ -1.65
LRRC28-220ENST00000561253 SCTP09683 121 aa4.74□□□□□ -1.65
LRRC28-220ENST00000561253 CHRNA7P36544 502 aa4.74□□□□□ -1.65
LRRC28-220ENST00000561253 TAS2R20P59543 309 aa4.74□□□□□ -1.65
LRRC28-220ENST00000561253 HLA-DRB3P79483 266 aa4.74□□□□□ -1.65
LRRC28-220ENST00000561253 GNMTQ14749 295 aa4.74□□□□□ -1.65
LRRC28-220ENST00000561253 HLA-DRB5Q30154 266 aa4.74□□□□□ -1.65
LRRC28-220ENST00000561253 DEFB112Q30KQ8 113 aa4.74□□□□□ -1.65
LRRC28-220ENST00000561253 TMEM30BQ3MIR4 351 aa4.74□□□□□ -1.65
LRRC28-220ENST00000561253 Q3ZCU0 254 aa4.74□□□□□ -1.65
LRRC28-220ENST00000561253 PHLDA2Q53GA4 152 aa4.74□□□□□ -1.65
LRRC28-220ENST00000561253 CT45A1Q5HYN5 189 aa4.74□□□□□ -1.65
LRRC28-220ENST00000561253 LY6G6FQ5SQ64 297 aa4.74□□□□□ -1.65
LRRC28-220ENST00000561253 C6orf183Q5T699 404 aa4.74□□□□□ -1.65
LRRC28-220ENST00000561253 LHFPL4Q7Z7J7 247 aa4.74□□□□□ -1.65
LRRC28-220ENST00000561253 PDZD9Q8IXQ8 264 aa4.74□□□□□ -1.65
LRRC28-220ENST00000561253 TEX29Q8N6K0 151 aa4.74□□□□□ -1.65
LRRC28-220ENST00000561253 THAP8Q8NA92 274 aa4.74□□□□□ -1.65
LRRC28-220ENST00000561253 CT45A3Q8NHU0 189 aa4.74□□□□□ -1.65
LRRC28-220ENST00000561253 SETD6Q8TBK2 473 aa4.74□□□□□ -1.65
LRRC28-220ENST00000561253 PIFOQ8TCI5 191 aa4.74□□□□□ -1.65
LRRC28-220ENST00000561253 NEK7Q8TDX7 302 aa4.74□□□□□ -1.65
LRRC28-220ENST00000561253 GPX8Q8TED1 209 aa4.74□□□□□ -1.65
LRRC28-220ENST00000561253 C22orf15Q8WYQ4 148 aa4.74□□□□□ -1.65
LRRC28-220ENST00000561253 AP3S1Q92572 193 aa4.74□□□□□ -1.65
LRRC28-220ENST00000561253 LEAP2Q969E1 77 aa4.74□□□□□ -1.65
LRRC28-220ENST00000561253 ARL11Q969Q4 196 aa4.74□□□□□ -1.65
LRRC28-220ENST00000561253 SLC6A7Q99884 636 aa4.74□□□□□ -1.65
LRRC28-220ENST00000561253 CMSS1Q9BQ75 279 aaKnown RBP4.74□□□□□ -1.65
LRRC28-220ENST00000561253 BEX2Q9BXY8 128 aa4.74□□□□□ -1.65
LRRC28-220ENST00000561253 GAL3ST2Q9H3Q3 398 aa4.74□□□□□ -1.65
LRRC28-220ENST00000561253 HEXA-AS1Q9H8Q6 139 aa4.74□□□□□ -1.65
LRRC28-220ENST00000561253 NDUFA13Q9P0J0 144 aa4.74□□□□□ -1.65
LRRC28-220ENST00000561253 COMMD3Q9UBI1 195 aa4.74□□□□□ -1.65
LRRC28-220ENST00000561253 ZNF230Q9UIE0 474 aaPredicted RBP4.74□□□□□ -1.65
LRRC28-220ENST00000561253 PSG11Q9UQ72 335 aa4.74□□□□□ -1.65
LRRC28-220ENST00000561253 WNK1Q9H4A3 2382 aa4.73□□□□□ -1.65
LRRC28-220ENST00000561253 TRBV6-7A0A0A0MS04 114 aa4.73□□□□□ -1.65
LRRC28-220ENST00000561253 KRTAP29-1A8MX34 341 aaPredicted RBP4.73□□□□□ -1.65
LRRC28-220ENST00000561253 TRDCB7Z8K6 153 aa4.73□□□□□ -1.65
LRRC28-220ENST00000561253 ITGB1BP1O14713 200 aa4.73□□□□□ -1.65
LRRC28-220ENST00000561253 VENTXO95231 258 aa4.73□□□□□ -1.65
LRRC28-220ENST00000561253 HNF1AP20823 631 aa4.73□□□□□ -1.65
LRRC28-220ENST00000561253 COX7A1P24310 79 aa4.73□□□□□ -1.65
LRRC28-220ENST00000561253 PAX6P26367 422 aa4.73□□□□□ -1.65
LRRC28-220ENST00000561253 HILS1P60008 231 aa4.73□□□□□ -1.65
LRRC28-220ENST00000561253 DIAPH2-AS1Q14236 149 aa4.73□□□□□ -1.65
LRRC28-220ENST00000561253 ARL6IP1Q15041 203 aa4.73□□□□□ -1.65
LRRC28-220ENST00000561253 MORN2Q502X0 79 aa4.73□□□□□ -1.65
LRRC28-220ENST00000561253 MINOS1Q5TGZ0 78 aa4.73□□□□□ -1.65
LRRC28-220ENST00000561253 GPR157Q5UAW9 335 aa4.73□□□□□ -1.65
LRRC28-220ENST00000561253 ZNF660Q6AZW8 331 aaPredicted RBP4.73□□□□□ -1.65
LRRC28-220ENST00000561253 OR52W1Q6IF63 320 aa4.73□□□□□ -1.65
LRRC28-220ENST00000561253 CNIH2Q6PI25 160 aa4.73□□□□□ -1.65
LRRC28-220ENST00000561253 TRAT1Q6PIZ9 186 aa4.73□□□□□ -1.65
LRRC28-220ENST00000561253 SLC25A48Q6ZT89 311 aaKnown RBP4.73□□□□□ -1.65
LRRC28-220ENST00000561253 TRAPPC6BQ86SZ2 158 aa4.73□□□□□ -1.65
LRRC28-220ENST00000561253 HOGA1Q86XE5 327 aa4.73□□□□□ -1.65
LRRC28-220ENST00000561253 ABHD12Q8N2K0 398 aa4.73□□□□□ -1.65
LRRC28-220ENST00000561253 GVQW1Q8N7I0 195 aa4.73□□□□□ -1.65
LRRC28-220ENST00000561253 ZDHHC22Q8N966 263 aa4.73□□□□□ -1.65
LRRC28-220ENST00000561253 OR13D1Q8NGV5 346 aa4.73□□□□□ -1.65
LRRC28-220ENST00000561253 MAFIPQ8WZ33 124 aa4.73□□□□□ -1.65
LRRC28-220ENST00000561253 S100A16Q96FQ6 103 aaKnown RBP4.73□□□□□ -1.65
LRRC28-220ENST00000561253 C5orf30Q96GV9 206 aa4.73□□□□□ -1.65
LRRC28-220ENST00000561253 ZNF251Q9BRH9 671 aa4.73□□□□□ -1.65
LRRC28-220ENST00000561253 DCUN1D5Q9BTE7 237 aa4.73□□□□□ -1.65
LRRC28-220ENST00000561253 SUCNR1Q9BXA5 334 aa4.73□□□□□ -1.65
LRRC28-220ENST00000561253 CLEC7AQ9BXN2 247 aa4.73□□□□□ -1.65
LRRC28-220ENST00000561253 IFI27L2Q9H2X8 130 aa4.73□□□□□ -1.65
LRRC28-220ENST00000561253 OR1A1Q9P1Q5 309 aa4.73□□□□□ -1.65
LRRC28-220ENST00000561253 JPT1Q9UK76 154 aa4.73□□□□□ -1.65
LRRC28-220ENST00000561253 TRAPPC2LQ9UL33 140 aa4.73□□□□□ -1.65
LRRC28-220ENST00000561253 RBMX2Q9Y388 322 aaKnown RBP4.73□□□□□ -1.65
LRRC28-220ENST00000561253 TMED3Q9Y3Q3 217 aa4.73□□□□□ -1.65
LRRC28-220ENST00000561253 MINOS1-NBL1R4GNA1 71 aa4.73□□□□□ -1.65
LRRC28-220ENST00000561253 V9GYH0 126 aa4.73□□□□□ -1.65
LRRC28-220ENST00000561253 TNCP24821 2201 aa4.72□□□□□ -1.65
LRRC28-220ENST00000561253 IGHV3-43A0A0B4J1X8 118 aa4.72□□□□□ -1.65
LRRC28-220ENST00000561253 A0A1W2PRD5 423 aa4.72□□□□□ -1.65
LRRC28-220ENST00000561253 A0A1W2PRF3 423 aa4.72□□□□□ -1.65
LRRC28-220ENST00000561253 A0A1W2PRM7 423 aa4.72□□□□□ -1.65
LRRC28-220ENST00000561253 A0A1W2PRV1 198 aa4.72□□□□□ -1.65
LRRC28-220ENST00000561253 BUB1B-PAK6H3BSN5 160 aa4.72□□□□□ -1.65
LRRC28-220ENST00000561253 CLDN34H7C241 214 aa4.72□□□□□ -1.65
LRRC28-220ENST00000561253 FABP7O15540 132 aa4.72□□□□□ -1.65
LRRC28-220ENST00000561253 YPEL1O60688 119 aa4.72□□□□□ -1.65
LRRC28-220ENST00000561253 IGHV3-7P01780 117 aa4.72□□□□□ -1.65
LRRC28-220ENST00000561253 CD3GP09693 182 aa4.72□□□□□ -1.65
LRRC28-220ENST00000561253 GSTT2P0CG29 244 aa4.72□□□□□ -1.65
LRRC28-220ENST00000561253 GSTT2BP0CG30 244 aa4.72□□□□□ -1.65
LRRC28-220ENST00000561253 IGHV3-43DP0DP04 118 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms