RNA–Protein interactions for RNA: ENST00000560927.1

CRTC3-210, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 2

Gene CRTC3, Length 2,463 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-210ENST00000560927 IFITM10A6NMD0 228 aa12.06□□□□□ -0.48
CRTC3-210ENST00000560927 HIST1H2BKO60814 126 aa12.06□□□□□ -0.48
CRTC3-210ENST00000560927 HIST1H2BJP06899 126 aa12.06□□□□□ -0.48
CRTC3-210ENST00000560927 HIST1H2BOP23527 126 aa12.06□□□□□ -0.48
CRTC3-210ENST00000560927 CD1BP29016 333 aa12.06□□□□□ -0.48
CRTC3-210ENST00000560927 HIST1H2BBP33778 126 aa12.06□□□□□ -0.48
CRTC3-210ENST00000560927 EIF2S3P41091 472 aaKnown RBP12.06□□□□□ -0.48
CRTC3-210ENST00000560927 HIST1H2BDP58876 126 aa12.06□□□□□ -0.48
CRTC3-210ENST00000560927 HIST1H2BCP62807 126 aa12.06□□□□□ -0.48
CRTC3-210ENST00000560927 RELBQ01201 579 aa12.06□□□□□ -0.48
CRTC3-210ENST00000560927 ADIRFQ15847 76 aa12.06□□□□□ -0.48
CRTC3-210ENST00000560927 HIST2H2BEQ16778 126 aa12.06□□□□□ -0.48
CRTC3-210ENST00000560927 CT45A1Q5HYN5 189 aa12.06□□□□□ -0.48
CRTC3-210ENST00000560927 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.06□□□□□ -0.48
CRTC3-210ENST00000560927 TGIF2LYQ8IUE0 185 aa12.06□□□□□ -0.48
CRTC3-210ENST00000560927 CT45A3Q8NHU0 189 aa12.06□□□□□ -0.48
CRTC3-210ENST00000560927 HIST1H2BHQ93079 126 aa12.06□□□□□ -0.48
CRTC3-210ENST00000560927 FAM210BQ96KR6 192 aa12.06□□□□□ -0.48
CRTC3-210ENST00000560927 S1PR3Q99500 378 aa12.06□□□□□ -0.48
CRTC3-210ENST00000560927 HIST1H2BNQ99877 126 aa12.06□□□□□ -0.48
CRTC3-210ENST00000560927 HIST1H2BMQ99879 126 aa12.06□□□□□ -0.48
CRTC3-210ENST00000560927 WDR83OSQ9Y284 106 aa12.06□□□□□ -0.48
CRTC3-210ENST00000560927 PLCE1Q9P212 2302 aa12.06□□□□□ -0.48
CRTC3-210ENST00000560927 IFNA10P01566 189 aa12.05□□□□□ -0.48
CRTC3-210ENST00000560927 SPNS3Q6ZMD2 512 aa12.05□□□□□ -0.48
CRTC3-210ENST00000560927 DEFB108BQ8NET1 73 aa12.05□□□□□ -0.48
CRTC3-210ENST00000560927 OR4F5Q8NH21 305 aa12.05□□□□□ -0.48
CRTC3-210ENST00000560927 DDB2Q92466 427 aa12.05□□□□□ -0.48
CRTC3-210ENST00000560927 OR4F4Q96R69 305 aa12.05□□□□□ -0.48
CRTC3-210ENST00000560927 GCM1Q9NP62 436 aa12.05□□□□□ -0.48
CRTC3-210ENST00000560927 TMEM140Q9NV12 185 aa12.05□□□□□ -0.48
CRTC3-210ENST00000560927 NAT8Q9UHE5 227 aa12.05□□□□□ -0.48
CRTC3-210ENST00000560927 RIF1Q5UIP0 2472 aaKnown RBP12.05□□□□□ -0.48
CRTC3-210ENST00000560927 CEP250Q9BV73 2442 aa12.05□□□□□ -0.48
CRTC3-210ENST00000560927 TRAV38-1A0A0B4J264 116 aa12.05□□□□□ -0.48
CRTC3-210ENST00000560927 SMCO3A2RU48 225 aa12.05□□□□□ -0.48
CRTC3-210ENST00000560927 PAGE4O60829 102 aa12.05□□□□□ -0.48
CRTC3-210ENST00000560927 KBTBD11O94819 623 aa12.05□□□□□ -0.48
CRTC3-210ENST00000560927 HOXA5P20719 270 aa12.05□□□□□ -0.48
CRTC3-210ENST00000560927 TIMP3P35625 211 aa12.05□□□□□ -0.48
CRTC3-210ENST00000560927 VDAC2P45880 294 aaPredicted RBP12.05□□□□□ -0.48
CRTC3-210ENST00000560927 SPCS3P61009 180 aa12.05□□□□□ -0.48
CRTC3-210ENST00000560927 CYP2G1PQ6ZSU1 146 aa12.05□□□□□ -0.48
CRTC3-210ENST00000560927 C1orf87Q8N0U7 546 aa12.05□□□□□ -0.48
CRTC3-210ENST00000560927 ABHD12Q8N2K0 398 aa12.05□□□□□ -0.48
CRTC3-210ENST00000560927 TMEM170AQ8WVE7 144 aa12.05□□□□□ -0.48
CRTC3-210ENST00000560927 PARLQ9H300 379 aa12.05□□□□□ -0.48
CRTC3-210ENST00000560927 HEYLQ9NQ87 328 aaPredicted RBP12.05□□□□□ -0.48
CRTC3-210ENST00000560927 NIT2Q9NQR4 276 aa12.05□□□□□ -0.48
CRTC3-210ENST00000560927 ATMQ13315 3056 aa12.05□□□□□ -0.48
CRTC3-210ENST00000560927 BSNQ9UPA5 3926 aa12.05□□□□□ -0.48
CRTC3-210ENST00000560927 TET2Q6N021 2002 aaPredicted RBP12.05□□□□□ -0.48
CRTC3-210ENST00000560927 ZFHX2Q9C0A1 2572 aaPredicted RBP12.04□□□□□ -0.48
CRTC3-210ENST00000560927 SAA2-SAA4A0A096LPE2 208 aa12.04□□□□□ -0.48
CRTC3-210ENST00000560927 C17orf112F2Z3M2 114 aa12.04□□□□□ -0.48
CRTC3-210ENST00000560927 IGHV1-46P01743 117 aa12.04□□□□□ -0.48
CRTC3-210ENST00000560927 SAA2P0DJI9 122 aaPredicted RBP12.04□□□□□ -0.48
CRTC3-210ENST00000560927 BMP5P22003 454 aa12.04□□□□□ -0.48
CRTC3-210ENST00000560927 TMEM241Q24JQ0 296 aa12.04□□□□□ -0.48
CRTC3-210ENST00000560927 TCF23Q7RTU1 214 aa12.04□□□□□ -0.48
CRTC3-210ENST00000560927 FAM222BQ8WU58 562 aa12.04□□□□□ -0.48
CRTC3-210ENST00000560927 DCAF16Q9NXF7 216 aa12.04□□□□□ -0.48
CRTC3-210ENST00000560927 MAP1BP46821 2468 aaKnown RBP12.04□□□□□ -0.48
CRTC3-210ENST00000560927 FAM90A9PA6NNJ1 464 aa12.04□□□□□ -0.48
CRTC3-210ENST00000560927 RBFOX2O43251 390 aaKnown RBP eCLIP12.04□□□□□ -0.48
CRTC3-210ENST00000560927 GFRA3O60609 400 aa12.04□□□□□ -0.48
CRTC3-210ENST00000560927 GATA4P43694 442 aa12.04□□□□□ -0.48
CRTC3-210ENST00000560927 CDC34P49427 236 aaPredicted RBP12.04□□□□□ -0.48
CRTC3-210ENST00000560927 ERVK-16P61578 105 aa12.04□□□□□ -0.48
CRTC3-210ENST00000560927 RPL23P62829 140 aaKnown RBP12.04□□□□□ -0.48
CRTC3-210ENST00000560927 TNFAIP6P98066 277 aaPredicted RBP12.04□□□□□ -0.48
CRTC3-210ENST00000560927 TCEAL7Q9BRU2 100 aa12.04□□□□□ -0.48
CRTC3-210ENST00000560927 GFOD1Q9NXC2 390 aa12.04□□□□□ -0.48
CRTC3-210ENST00000560927 KBTBD11-OT1A0A1B0GTJ5 212 aa12.03□□□□□ -0.48
CRTC3-210ENST00000560927 PRSS46E5RG02 174 aa12.03□□□□□ -0.48
CRTC3-210ENST00000560927 TMEM250H0YL14 139 aa12.03□□□□□ -0.48
CRTC3-210ENST00000560927 TREML4Q6UXN2 200 aa12.03□□□□□ -0.48
CRTC3-210ENST00000560927 ABHD5Q8WTS1 349 aa12.03□□□□□ -0.48
CRTC3-210ENST00000560927 SNRNP40Q96DI7 357 aaKnown RBP12.03□□□□□ -0.48
CRTC3-210ENST00000560927 ZNF251Q9BRH9 671 aa12.03□□□□□ -0.48
CRTC3-210ENST00000560927 MANBALQ9NQG1 85 aa12.03□□□□□ -0.48
CRTC3-210ENST00000560927 RNF7Q9UBF6 113 aa12.03□□□□□ -0.48
CRTC3-210ENST00000560927 KLK10O43240 276 aa12.03□□□□□ -0.48
CRTC3-210ENST00000560927 CCKARP32238 428 aa12.03□□□□□ -0.48
CRTC3-210ENST00000560927 S100A12P80511 92 aa12.03□□□□□ -0.48
CRTC3-210ENST00000560927 RTP5Q14D33 572 aa12.03□□□□□ -0.48
CRTC3-210ENST00000560927 ACOT6Q3I5F7 207 aaPredicted RBP12.03□□□□□ -0.48
CRTC3-210ENST00000560927 C3orf36Q3SXR2 165 aa12.03□□□□□ -0.48
CRTC3-210ENST00000560927 GFI1BQ5VTD9 330 aa12.03□□□□□ -0.48
CRTC3-210ENST00000560927 STUMQ69YW2 141 aa12.03□□□□□ -0.48
CRTC3-210ENST00000560927 C16orf82Q7Z2V1 217 aa12.03□□□□□ -0.48
CRTC3-210ENST00000560927 FAM216BQ8N7L0 139 aa12.03□□□□□ -0.48
CRTC3-210ENST00000560927 NECAP1Q8NC96 275 aa12.03□□□□□ -0.48
CRTC3-210ENST00000560927 OR52E5Q8NH55 327 aa12.03□□□□□ -0.48
CRTC3-210ENST00000560927 FRZBQ92765 325 aa12.03□□□□□ -0.48
CRTC3-210ENST00000560927 DIRC2Q96SL1 478 aa12.03□□□□□ -0.48
CRTC3-210ENST00000560927 CCL13Q99616 98 aa12.03□□□□□ -0.48
CRTC3-210ENST00000560927 SFXN3Q9BWM7 321 aa12.03□□□□□ -0.48
CRTC3-210ENST00000560927 PATZ1Q9HBE1 687 aaKnown RBP12.03□□□□□ -0.48
CRTC3-210ENST00000560927 A8MXE2 369 aa12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms