RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 RAMP3O60896 148 aa11.89□□□□□ -0.51
SNRPA1-213ENST00000560856 SLC6A1P30531 599 aa11.89□□□□□ -0.51
SNRPA1-213ENST00000560856 RAB9AP51151 201 aa11.89□□□□□ -0.51
SNRPA1-213ENST00000560856 VMA21Q3ZAQ7 101 aa11.89□□□□□ -0.51
SNRPA1-213ENST00000560856 SAMD5Q5TGI4 173 aa11.89□□□□□ -0.51
SNRPA1-213ENST00000560856 ASPHD1Q5U4P2 390 aa11.89□□□□□ -0.51
SNRPA1-213ENST00000560856 PUSL1Q8N0Z8 303 aaKnown RBP11.89□□□□□ -0.51
SNRPA1-213ENST00000560856 TCTEX1D1Q8N7M0 179 aa11.89□□□□□ -0.51
SNRPA1-213ENST00000560856 LINC00482Q8N8I6 264 aa11.89□□□□□ -0.51
SNRPA1-213ENST00000560856 ZNF491Q8N8L2 437 aa11.89□□□□□ -0.51
SNRPA1-213ENST00000560856 KLHL30-AS1Q8NEE0 82 aa11.89□□□□□ -0.51
SNRPA1-213ENST00000560856 OR4S2Q8NH73 311 aa11.89□□□□□ -0.51
SNRPA1-213ENST00000560856 C15orf40Q8WUR7 153 aa11.89□□□□□ -0.51
SNRPA1-213ENST00000560856 DIRAS2Q96HU8 199 aa11.89□□□□□ -0.51
SNRPA1-213ENST00000560856 P2RX4Q99571 388 aa11.89□□□□□ -0.51
SNRPA1-213ENST00000560856 FOXA2Q9Y261 457 aaPredicted RBP11.89□□□□□ -0.51
SNRPA1-213ENST00000560856 A3GALT2U3KPV4 340 aa11.89□□□□□ -0.51
SNRPA1-213ENST00000560856 DNAH3Q8TD57 4116 aa11.88□□□□□ -0.51
SNRPA1-213ENST00000560856 A0A1W2PN81 502 aa11.88□□□□□ -0.51
SNRPA1-213ENST00000560856 G3V4G9 280 aa11.88□□□□□ -0.51
SNRPA1-213ENST00000560856 GABARAPH6UMI1 98 aa11.88□□□□□ -0.51
SNRPA1-213ENST00000560856 PGLYRP1O75594 196 aaPredicted RBP11.88□□□□□ -0.51
SNRPA1-213ENST00000560856 CD3DP04234 171 aa11.88□□□□□ -0.51
SNRPA1-213ENST00000560856 TNFSF8P32971 234 aa11.88□□□□□ -0.51
SNRPA1-213ENST00000560856 CHRNA7P36544 502 aa11.88□□□□□ -0.51
SNRPA1-213ENST00000560856 KIR2DS2P43631 304 aa11.88□□□□□ -0.51
SNRPA1-213ENST00000560856 TMEM267Q0VDI3 215 aaPredicted RBP11.88□□□□□ -0.51
SNRPA1-213ENST00000560856 AADACL3Q5VUY0 350 aa11.88□□□□□ -0.51
SNRPA1-213ENST00000560856 UNQ5815/PRO19632Q6UWF5 114 aa11.88□□□□□ -0.51
SNRPA1-213ENST00000560856 MRPL41Q8IXM3 137 aaKnown RBP11.88□□□□□ -0.51
SNRPA1-213ENST00000560856 VKORC1L1Q8N0U8 176 aa11.88□□□□□ -0.51
SNRPA1-213ENST00000560856 SPAG16Q8N0X2 631 aa11.88□□□□□ -0.51
SNRPA1-213ENST00000560856 GRPEL2Q8TAA5 225 aa11.88□□□□□ -0.51
SNRPA1-213ENST00000560856 ABHD5Q8WTS1 349 aa11.88□□□□□ -0.51
SNRPA1-213ENST00000560856 RAX2Q96IS3 184 aa11.88□□□□□ -0.51
SNRPA1-213ENST00000560856 DCUN1D5Q9BTE7 237 aa11.88□□□□□ -0.51
SNRPA1-213ENST00000560856 TINAGL1Q9GZM7 467 aaPredicted RBP11.88□□□□□ -0.51
SNRPA1-213ENST00000560856 ZNF430Q9H8G1 570 aaPredicted RBP11.88□□□□□ -0.51
SNRPA1-213ENST00000560856 GNB4Q9HAV0 340 aa11.88□□□□□ -0.51
SNRPA1-213ENST00000560856 NUDT19A8MXV4 375 aa11.87□□□□□ -0.51
SNRPA1-213ENST00000560856 ZNF701M0R085 212 aaPredicted RBP11.87□□□□□ -0.51
SNRPA1-213ENST00000560856 CTDSPLO15194 276 aa11.87□□□□□ -0.51
SNRPA1-213ENST00000560856 CD74P04233 296 aa11.87□□□□□ -0.51
SNRPA1-213ENST00000560856 IL6RP08887 468 aaPredicted RBP11.87□□□□□ -0.51
SNRPA1-213ENST00000560856 MYCNOSP40205 109 aa11.87□□□□□ -0.51
SNRPA1-213ENST00000560856 UCP3P55916 312 aa11.87□□□□□ -0.51
SNRPA1-213ENST00000560856 GNB1P62873 340 aa11.87□□□□□ -0.51
SNRPA1-213ENST00000560856 POU2AF1Q16633 256 aa11.87□□□□□ -0.51
SNRPA1-213ENST00000560856 ACTBL2Q562R1 376 aa11.87□□□□□ -0.51
SNRPA1-213ENST00000560856 PYHIN1Q6K0P9 492 aa11.87□□□□□ -0.51
SNRPA1-213ENST00000560856 LHFPL1Q86WI0 220 aa11.87□□□□□ -0.51
SNRPA1-213ENST00000560856 C1QL4Q86Z23 238 aa11.87□□□□□ -0.51
SNRPA1-213ENST00000560856 TMEM229BQ8NBD8 167 aa11.87□□□□□ -0.51
SNRPA1-213ENST00000560856 MCFD2Q8NI22 146 aa11.87□□□□□ -0.51
SNRPA1-213ENST00000560856 TMEM167AQ8TBQ9 72 aa11.87□□□□□ -0.51
SNRPA1-213ENST00000560856 CASTOR1Q8WTX7 329 aa11.87□□□□□ -0.51
SNRPA1-213ENST00000560856 SMIM4Q8WVI0 70 aa11.87□□□□□ -0.51
SNRPA1-213ENST00000560856 FCAMRQ8WWV6 532 aa11.87□□□□□ -0.51
SNRPA1-213ENST00000560856 RHOVQ96L33 236 aa11.87□□□□□ -0.51
SNRPA1-213ENST00000560856 UBE2E2Q96LR5 201 aa11.87□□□□□ -0.51
SNRPA1-213ENST00000560856 DUX3Q96PT4 197 aa11.87□□□□□ -0.51
SNRPA1-213ENST00000560856 C6orf62Q9GZU0 229 aaPredicted RBP11.87□□□□□ -0.51
SNRPA1-213ENST00000560856 RSL24D1Q9UHA3 163 aaKnown RBP11.87□□□□□ -0.51
SNRPA1-213ENST00000560856 I3L521 148 aa11.86□□□□□ -0.51
SNRPA1-213ENST00000560856 GPR31O00270 319 aa11.86□□□□□ -0.51
SNRPA1-213ENST00000560856 CNIH1O95406 144 aa11.86□□□□□ -0.51
SNRPA1-213ENST00000560856 PF4P02776 101 aa11.86□□□□□ -0.51
SNRPA1-213ENST00000560856 TBPP20226 339 aa11.86□□□□□ -0.51
SNRPA1-213ENST00000560856 TSPAN5P62079 268 aa11.86□□□□□ -0.51
SNRPA1-213ENST00000560856 MRPS10P82664 201 aaKnown RBP11.86□□□□□ -0.51
SNRPA1-213ENST00000560856 RUNX1Q01196 453 aa11.86□□□□□ -0.51
SNRPA1-213ENST00000560856 SSBP1Q04837 148 aaKnown RBP11.86□□□□□ -0.51
SNRPA1-213ENST00000560856 CATR1Q13166 79 aa11.86□□□□□ -0.51
SNRPA1-213ENST00000560856 DEFB136Q30KP8 78 aa11.86□□□□□ -0.51
SNRPA1-213ENST00000560856 BEAN1Q3B7T3 259 aa11.86□□□□□ -0.51
SNRPA1-213ENST00000560856 OXLD1Q5BKU9 147 aa11.86□□□□□ -0.51
SNRPA1-213ENST00000560856 KPRPQ5T749 579 aaPredicted RBP11.86□□□□□ -0.51
SNRPA1-213ENST00000560856 MMD2Q8IY49 270 aa11.86□□□□□ -0.51
SNRPA1-213ENST00000560856 OR4D10Q8NGI6 311 aa11.86□□□□□ -0.51
SNRPA1-213ENST00000560856 OR5M8Q8NGP6 311 aa11.86□□□□□ -0.51
SNRPA1-213ENST00000560856 OR51H1Q8NH63 302 aa11.86□□□□□ -0.51
SNRPA1-213ENST00000560856 C4orf3Q8WVX3 66 aa11.86□□□□□ -0.51
SNRPA1-213ENST00000560856 BORCS5Q969J3 196 aa11.86□□□□□ -0.51
SNRPA1-213ENST00000560856 RSRP1Q9BUV0 290 aa11.86□□□□□ -0.51
SNRPA1-213ENST00000560856 RABL2AQ9UBK7 228 aaPredicted RBP11.86□□□□□ -0.51
SNRPA1-213ENST00000560856 RABL2BQ9UNT1 228 aa11.86□□□□□ -0.51
SNRPA1-213ENST00000560856 CCDC160A6NGH7 325 aa11.85□□□□□ -0.51
SNRPA1-213ENST00000560856 MSGN1A6NI15 193 aa11.85□□□□□ -0.51
SNRPA1-213ENST00000560856 CCL24O00175 119 aa11.85□□□□□ -0.51
SNRPA1-213ENST00000560856 KBTBD11O94819 623 aa11.85□□□□□ -0.51
SNRPA1-213ENST00000560856 OR2A4O95047 310 aa11.85□□□□□ -0.51
SNRPA1-213ENST00000560856 HRASP01112 189 aa11.85□□□□□ -0.51
SNRPA1-213ENST00000560856 ZNF735P0CB33 412 aa11.85□□□□□ -0.51
SNRPA1-213ENST00000560856 TNXAQ16473 311 aa11.85□□□□□ -0.51
SNRPA1-213ENST00000560856 ZNF585BQ52M93 769 aa11.85□□□□□ -0.51
SNRPA1-213ENST00000560856 RNASE10Q5GAN6 216 aaKnown RBP11.85□□□□□ -0.51
SNRPA1-213ENST00000560856 C10orf55Q5SWW7 151 aa11.85□□□□□ -0.51
SNRPA1-213ENST00000560856 TMEM65Q6PI78 240 aa11.85□□□□□ -0.51
SNRPA1-213ENST00000560856 OR5T1Q8NG75 326 aa11.85□□□□□ -0.51
SNRPA1-213ENST00000560856 SRSF12Q8WXF0 261 aaKnown RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms