RNA–Protein interactions for RNA: ENST00000560842.1

PSMA4-221, Transcript of proteasome subunit alpha 4, humanhuman

TSL 1 (best)

Gene PSMA4, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-221ENST00000560842 NOTCH1P46531 2555 aa0.78□□□□□ -2.28
PSMA4-221ENST00000560842 FBN2P35556 2912 aa0.78□□□□□ -2.29
PSMA4-221ENST00000560842 A0A0D9SEW6 157 aa0.77□□□□□ -2.29
PSMA4-221ENST00000560842 H7C2G1 150 aa0.77□□□□□ -2.29
PSMA4-221ENST00000560842 STX10O60499 249 aa0.77□□□□□ -2.29
PSMA4-221ENST00000560842 CRPP02741 224 aa0.77□□□□□ -2.29
PSMA4-221ENST00000560842 LGALS1P09382 135 aaKnown RBP0.77□□□□□ -2.29
PSMA4-221ENST00000560842 RD3LP0DJH9 198 aa0.77□□□□□ -2.29
PSMA4-221ENST00000560842 CCL5P13501 91 aa0.77□□□□□ -2.29
PSMA4-221ENST00000560842 IL9P15248 144 aa0.77□□□□□ -2.29
PSMA4-221ENST00000560842 CCR7P32248 378 aa0.77□□□□□ -2.29
PSMA4-221ENST00000560842 CDK9P50750 372 aaKnown RBP0.77□□□□□ -2.29
PSMA4-221ENST00000560842 AQP4P55087 323 aa0.77□□□□□ -2.29
PSMA4-221ENST00000560842 HLA-DRB3P79483 266 aa0.77□□□□□ -2.29
PSMA4-221ENST00000560842 ACSM3Q53FZ2 586 aa0.77□□□□□ -2.29
PSMA4-221ENST00000560842 C7orf65Q6ZTY9 151 aa0.77□□□□□ -2.29
PSMA4-221ENST00000560842 Q8N2B8 174 aa0.77□□□□□ -2.29
PSMA4-221ENST00000560842 IMMP2LQ96T52 175 aa0.77□□□□□ -2.29
PSMA4-221ENST00000560842 ADAT1Q9BUB4 502 aaKnown RBP0.77□□□□□ -2.29
PSMA4-221ENST00000560842 NSRP1Q9H0G5 558 aaKnown RBP0.77□□□□□ -2.29
PSMA4-221ENST00000560842 CST9LQ9H4G1 147 aa0.77□□□□□ -2.29
PSMA4-221ENST00000560842 RTTNQ86VV8 2226 aa0.77□□□□□ -2.29
PSMA4-221ENST00000560842 TMED7-TICAM2A0A0A6YYA0 188 aa0.76□□□□□ -2.29
PSMA4-221ENST00000560842 C5orf49A4QMS7 147 aa0.76□□□□□ -2.29
PSMA4-221ENST00000560842 KRT75O95678 551 aa0.76□□□□□ -2.29
PSMA4-221ENST00000560842 RPSAP08865 295 aaKnown RBP0.76□□□□□ -2.29
PSMA4-221ENST00000560842 PMS2P3Q13401 168 aa0.76□□□□□ -2.29
PSMA4-221ENST00000560842 ARHGAP11BQ3KRB8 267 aa0.76□□□□□ -2.29
PSMA4-221ENST00000560842 DNAL1Q4LDG9 190 aa0.76□□□□□ -2.29
PSMA4-221ENST00000560842 CLEC6AQ6EIG7 209 aa0.76□□□□□ -2.29
PSMA4-221ENST00000560842 DNM1P34Q6PK57 102 aa0.76□□□□□ -2.29
PSMA4-221ENST00000560842 SLC36A1Q7Z2H8 476 aa0.76□□□□□ -2.29
PSMA4-221ENST00000560842 FAM19A5Q7Z5A7 132 aaPredicted RBP0.76□□□□□ -2.29
PSMA4-221ENST00000560842 C9orf163Q8N9P6 203 aa0.76□□□□□ -2.29
PSMA4-221ENST00000560842 ASB13Q8WXK3 278 aa0.76□□□□□ -2.29
PSMA4-221ENST00000560842 EURLQ9NYK6 297 aa0.76□□□□□ -2.29
PSMA4-221ENST00000560842 TIMM9Q9Y5J7 89 aa0.76□□□□□ -2.29
PSMA4-221ENST00000560842 STRCQ7RTU9 1775 aa0.75□□□□□ -2.29
PSMA4-221ENST00000560842 RAD50Q92878 1312 aa0.75□□□□□ -2.29
PSMA4-221ENST00000560842 OR51F1A6NGY5 319 aa0.75□□□□□ -2.29
PSMA4-221ENST00000560842 NEMFO60524 1076 aa0.75□□□□□ -2.29
PSMA4-221ENST00000560842 APOMO95445 188 aa0.75□□□□□ -2.29
PSMA4-221ENST00000560842 IL6P05231 212 aa0.75□□□□□ -2.29
PSMA4-221ENST00000560842 HLA-DQB2P05538 268 aa0.75□□□□□ -2.29
PSMA4-221ENST00000560842 RPL28P46779 137 aaKnown RBP0.75□□□□□ -2.29
PSMA4-221ENST00000560842 CLDN12P56749 244 aa0.75□□□□□ -2.29
PSMA4-221ENST00000560842 AP1S1P61966 158 aa0.75□□□□□ -2.29
PSMA4-221ENST00000560842 MGAT3Q09327 533 aa0.75□□□□□ -2.29
PSMA4-221ENST00000560842 ZNF705AQ6ZN79 300 aaPredicted RBP0.75□□□□□ -2.29
PSMA4-221ENST00000560842 CCL13Q99616 98 aa0.75□□□□□ -2.29
PSMA4-221ENST00000560842 TMEM109Q9BVC6 243 aa0.75□□□□□ -2.29
PSMA4-221ENST00000560842 MS4A6AQ9H2W1 248 aa0.75□□□□□ -2.29
PSMA4-221ENST00000560842 HES4Q9HCC6 221 aa0.75□□□□□ -2.29
PSMA4-221ENST00000560842 GLI3P10071 1580 aa0.74□□□□□ -2.29
PSMA4-221ENST00000560842 PCDH15Q96QU1 1955 aa0.74□□□□□ -2.29
PSMA4-221ENST00000560842 FLT4P35916 1363 aa0.74□□□□□ -2.29
PSMA4-221ENST00000560842 HSBP1L1C9JCN9 74 aa0.74□□□□□ -2.29
PSMA4-221ENST00000560842 NDUFS6O75380 124 aaKnown RBP0.74□□□□□ -2.29
PSMA4-221ENST00000560842 ATP6V1G2O95670 118 aa0.74□□□□□ -2.29
PSMA4-221ENST00000560842 RAB14P61106 215 aa0.74□□□□□ -2.29
PSMA4-221ENST00000560842 HIST1H4AP62805 103 aaKnown RBP0.74□□□□□ -2.29
PSMA4-221ENST00000560842 AKR1C1Q04828 323 aa0.74□□□□□ -2.29
PSMA4-221ENST00000560842 ELOBQ15370 118 aa0.74□□□□□ -2.29
PSMA4-221ENST00000560842 LRRC75BQ2VPJ9 315 aa0.74□□□□□ -2.29
PSMA4-221ENST00000560842 CD302Q8IX05 232 aa0.74□□□□□ -2.29
PSMA4-221ENST00000560842 C12orf43Q96C57 262 aaKnown RBP0.74□□□□□ -2.29
PSMA4-221ENST00000560842 TMA16Q96EY4 203 aaKnown RBP0.74□□□□□ -2.29
PSMA4-221ENST00000560842 PACRGQ96M98 296 aaPredicted RBP0.74□□□□□ -2.29
PSMA4-221ENST00000560842 TIPINQ9BVW5 301 aa0.74□□□□□ -2.29
PSMA4-221ENST00000560842 CHST6Q9GZX3 395 aa0.74□□□□□ -2.29
PSMA4-221ENST00000560842 WDR54Q9H977 334 aa0.74□□□□□ -2.29
PSMA4-221ENST00000560842 XAGE1AQ9HD64 81 aa0.74□□□□□ -2.29
PSMA4-221ENST00000560842 ZNHIT6Q9NWK9 470 aaKnown RBP0.74□□□□□ -2.29
PSMA4-221ENST00000560842 SYNRGQ9UMZ2 1314 aa0.73□□□□□ -2.29
PSMA4-221ENST00000560842 DEFA4P12838 97 aa0.73□□□□□ -2.29
PSMA4-221ENST00000560842 HIST1H1CP16403 213 aaKnown RBP0.73□□□□□ -2.29
PSMA4-221ENST00000560842 JOSD1Q15040 202 aaPredicted RBP0.73□□□□□ -2.29
PSMA4-221ENST00000560842 SDHAF4Q5VUM1 108 aa0.73□□□□□ -2.29
PSMA4-221ENST00000560842 RASSF6Q6ZTQ3 369 aa0.73□□□□□ -2.29
PSMA4-221ENST00000560842 DCXRQ7Z4W1 244 aa0.73□□□□□ -2.29
PSMA4-221ENST00000560842 RPS19BP1Q86WX3 136 aaKnown RBP0.73□□□□□ -2.29
PSMA4-221ENST00000560842 RPP25LQ8N5L8 163 aaKnown RBP0.73□□□□□ -2.29
PSMA4-221ENST00000560842 C15orf53Q8NAA6 179 aa0.73□□□□□ -2.29
PSMA4-221ENST00000560842 RAB2BQ8WUD1 216 aa0.73□□□□□ -2.29
PSMA4-221ENST00000560842 ANKRD36BP1Q96IX9 119 aa0.73□□□□□ -2.29
PSMA4-221ENST00000560842 ZNF469Q96JG9 3925 aaPredicted RBP0.72□□□□□ -2.29
PSMA4-221ENST00000560842 TRAV38-1A0A0B4J264 116 aa0.72□□□□□ -2.29
PSMA4-221ENST00000560842 TINCRA0A1B0GVN0 87 aa0.72□□□□□ -2.29
PSMA4-221ENST00000560842 MEIS3P1A6NDR6 274 aa0.72□□□□□ -2.29
PSMA4-221ENST00000560842 H3BT86 120 aa0.72□□□□□ -2.29
PSMA4-221ENST00000560842 CREBL2O60519 120 aaPredicted RBP0.72□□□□□ -2.29
PSMA4-221ENST00000560842 DDTP30046 118 aa0.72□□□□□ -2.29
PSMA4-221ENST00000560842 CXCR4P61073 352 aa0.72□□□□□ -2.29
PSMA4-221ENST00000560842 CDK5R1Q15078 307 aa0.72□□□□□ -2.29
PSMA4-221ENST00000560842 ANGPT1Q15389 498 aa0.72□□□□□ -2.29
PSMA4-221ENST00000560842 SAPCD1Q5SSQ6 148 aa0.72□□□□□ -2.29
PSMA4-221ENST00000560842 FAM173BQ6P4H8 233 aa0.72□□□□□ -2.29
PSMA4-221ENST00000560842 SYCE1Q8N0S2 351 aa0.72□□□□□ -2.29
PSMA4-221ENST00000560842 HAVCR2Q8TDQ0 301 aa0.72□□□□□ -2.29
PSMA4-221ENST00000560842 GNPNAT1Q96EK6 184 aaPredicted RBP0.72□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 143.8 ms