RNA–Protein interactions for RNA: ENST00000560491.2

LYSMD2-204, Transcript of LysM domain containing 2, humanhuman

TSL 3 BASIC

Gene LYSMD2, Length 1,026 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-204ENST00000560491 PJVKQ0ZLH3 352 aa12.21□□□□□ -0.45
LYSMD2-204ENST00000560491 BAK1Q16611 211 aa12.21□□□□□ -0.45
LYSMD2-204ENST00000560491 VMA21Q3ZAQ7 101 aa12.21□□□□□ -0.45
LYSMD2-204ENST00000560491 LPCAT3Q6P1A2 487 aa12.21□□□□□ -0.45
LYSMD2-204ENST00000560491 TBC1D26Q86UD7 250 aa12.21□□□□□ -0.45
LYSMD2-204ENST00000560491 PPP1R27Q86WC6 154 aa12.21□□□□□ -0.45
LYSMD2-204ENST00000560491 TOMM5Q8N4H5 51 aa12.21□□□□□ -0.45
LYSMD2-204ENST00000560491 OR5AU1Q8NGC0 362 aa12.21□□□□□ -0.45
LYSMD2-204ENST00000560491 OR51S1Q8NGJ8 323 aa12.21□□□□□ -0.45
LYSMD2-204ENST00000560491 OR13C8Q8NGS7 320 aa12.21□□□□□ -0.45
LYSMD2-204ENST00000560491 MARCH1Q8TCQ1 289 aa12.21□□□□□ -0.45
LYSMD2-204ENST00000560491 SLC2A9Q9NRM0 540 aa12.21□□□□□ -0.45
LYSMD2-204ENST00000560491 ARPC1BO15143 372 aaKnown RBP12.2□□□□□ -0.46
LYSMD2-204ENST00000560491 RBFOX2O43251 390 aaKnown RBP eCLIP12.2□□□□□ -0.46
LYSMD2-204ENST00000560491 S1PR2O95136 353 aa12.2□□□□□ -0.46
LYSMD2-204ENST00000560491 GNB1P62873 340 aa12.2□□□□□ -0.46
LYSMD2-204ENST00000560491 CX3CL1P78423 397 aa12.2□□□□□ -0.46
LYSMD2-204ENST00000560491 SSBP2P81877 361 aaPredicted RBP12.2□□□□□ -0.46
LYSMD2-204ENST00000560491 MRGPRG-AS1Q2M3A8 158 aa12.2□□□□□ -0.46
LYSMD2-204ENST00000560491 TCTEX1D4Q5JR98 221 aa12.2□□□□□ -0.46
LYSMD2-204ENST00000560491 SSX9Q7RTT3 188 aa12.2□□□□□ -0.46
LYSMD2-204ENST00000560491 GDPD1Q8N9F7 314 aa12.2□□□□□ -0.46
LYSMD2-204ENST00000560491 ABHD5Q8WTS1 349 aa12.2□□□□□ -0.46
LYSMD2-204ENST00000560491 CHPT1Q8WUD6 406 aa12.2□□□□□ -0.46
LYSMD2-204ENST00000560491 PRRT1Q99946 306 aa12.2□□□□□ -0.46
LYSMD2-204ENST00000560491 CITED2Q99967 270 aaPredicted RBP12.2□□□□□ -0.46
LYSMD2-204ENST00000560491 FAM103A1Q9BTL3 118 aaKnown RBP12.2□□□□□ -0.46
LYSMD2-204ENST00000560491 HRASLSQ9HDD0 168 aa12.2□□□□□ -0.46
LYSMD2-204ENST00000560491 AKIP1Q9NQ31 210 aa12.2□□□□□ -0.46
LYSMD2-204ENST00000560491 PTTG2Q9NZH5 202 aa12.2□□□□□ -0.46
LYSMD2-204ENST00000560491 WSB1Q9Y6I7 421 aa12.2□□□□□ -0.46
LYSMD2-204ENST00000560491 G3V318 75 aa12.19□□□□□ -0.46
LYSMD2-204ENST00000560491 IGF1P05019 195 aa12.19□□□□□ -0.46
LYSMD2-204ENST00000560491 F2RP25116 425 aa12.19□□□□□ -0.46
LYSMD2-204ENST00000560491 S100GP29377 79 aa12.19□□□□□ -0.46
LYSMD2-204ENST00000560491 PIGPP57054 158 aa12.19□□□□□ -0.46
LYSMD2-204ENST00000560491 AP3S2P59780 193 aa12.19□□□□□ -0.46
LYSMD2-204ENST00000560491 ZNF45Q02386 682 aa12.19□□□□□ -0.46
LYSMD2-204ENST00000560491 ECSCRQ19T08 205 aa12.19□□□□□ -0.46
LYSMD2-204ENST00000560491 TRIQKQ629K1 86 aa12.19□□□□□ -0.46
LYSMD2-204ENST00000560491 ZNF57Q68EA5 555 aaPredicted RBP12.19□□□□□ -0.46
LYSMD2-204ENST00000560491 TEX45Q8NA69 505 aa12.19□□□□□ -0.46
LYSMD2-204ENST00000560491 POC5Q8NA72 575 aa12.19□□□□□ -0.46
LYSMD2-204ENST00000560491 SLC2A8Q9NY64 477 aa12.19□□□□□ -0.46
LYSMD2-204ENST00000560491 HPRT1P00492 218 aa12.18□□□□□ -0.46
LYSMD2-204ENST00000560491 HRASP01112 189 aa12.18□□□□□ -0.46
LYSMD2-204ENST00000560491 EGR2P11161 476 aaPredicted RBP12.18□□□□□ -0.46
LYSMD2-204ENST00000560491 RPA2P15927 270 aa12.18□□□□□ -0.46
LYSMD2-204ENST00000560491 VDAC1P21796 283 aa12.18□□□□□ -0.46
LYSMD2-204ENST00000560491 FAUP35544 74 aaKnown RBP12.18□□□□□ -0.46
LYSMD2-204ENST00000560491 LPAR6P43657 344 aa12.18□□□□□ -0.46
LYSMD2-204ENST00000560491 RND3P61587 244 aa12.18□□□□□ -0.46
LYSMD2-204ENST00000560491 SLC35B1P78383 322 aa12.18□□□□□ -0.46
LYSMD2-204ENST00000560491 CFHR3Q02985 330 aa12.18□□□□□ -0.46
LYSMD2-204ENST00000560491 FXYD3Q14802 87 aa12.18□□□□□ -0.46
LYSMD2-204ENST00000560491 ZNF585BQ52M93 769 aa12.18□□□□□ -0.46
LYSMD2-204ENST00000560491 ZNF562Q6V9R5 426 aa12.18□□□□□ -0.46
LYSMD2-204ENST00000560491 GRPEL2Q8TAA5 225 aa12.18□□□□□ -0.46
LYSMD2-204ENST00000560491 ZFAND1Q8TCF1 268 aa12.18□□□□□ -0.46
LYSMD2-204ENST00000560491 ARPC1AQ92747 370 aa12.18□□□□□ -0.46
LYSMD2-204ENST00000560491 ZNF486Q96H40 463 aaPredicted RBP12.18□□□□□ -0.46
LYSMD2-204ENST00000560491 RHOVQ96L33 236 aa12.18□□□□□ -0.46
LYSMD2-204ENST00000560491 LINC00854A0A1B0GVQ3 168 aa12.17□□□□□ -0.46
LYSMD2-204ENST00000560491 MPPED1O15442 326 aa12.17□□□□□ -0.46
LYSMD2-204ENST00000560491 CTSDP07339 412 aaPredicted RBP12.17□□□□□ -0.46
LYSMD2-204ENST00000560491 IL7P13232 177 aa12.17□□□□□ -0.46
LYSMD2-204ENST00000560491 ECI1P42126 302 aa12.17□□□□□ -0.46
LYSMD2-204ENST00000560491 INPP1P49441 399 aa12.17□□□□□ -0.46
LYSMD2-204ENST00000560491 TAS2R31P59538 309 aa12.17□□□□□ -0.46
LYSMD2-204ENST00000560491 PRSS8Q16651 343 aa12.17□□□□□ -0.46
LYSMD2-204ENST00000560491 OR4A47Q6IF82 309 aa12.17□□□□□ -0.46
LYSMD2-204ENST00000560491 LCNL1Q6ZST4 164 aa12.17□□□□□ -0.46
LYSMD2-204ENST00000560491 PUSL1Q8N0Z8 303 aaKnown RBP12.17□□□□□ -0.46
LYSMD2-204ENST00000560491 OR4X2Q8NGF9 303 aa12.17□□□□□ -0.46
LYSMD2-204ENST00000560491 CD300LFQ8TDQ1 290 aa12.17□□□□□ -0.46
LYSMD2-204ENST00000560491 R3HDM4Q96D70 268 aa12.17□□□□□ -0.46
LYSMD2-204ENST00000560491 C5orf66Q9H5L9 145 aa12.17□□□□□ -0.46
LYSMD2-204ENST00000560491 ZNF430Q9H8G1 570 aaPredicted RBP12.17□□□□□ -0.46
LYSMD2-204ENST00000560491 PLEKHA2Q9HB19 425 aa12.17□□□□□ -0.46
LYSMD2-204ENST00000560491 COPZ2Q9P299 210 aa12.17□□□□□ -0.46
LYSMD2-204ENST00000560491 SCP2D1Q9UJQ7 156 aa12.17□□□□□ -0.46
LYSMD2-204ENST00000560491 ZNF580Q9UK33 172 aa12.17□□□□□ -0.46
LYSMD2-204ENST00000560491 C14orf166Q9Y224 244 aaKnown RBP12.17□□□□□ -0.46
LYSMD2-204ENST00000560491 TRRAPQ9Y4A5 3859 aa12.16□□□□□ -0.46
LYSMD2-204ENST00000560491 TRAV41A0A0B4J266 112 aa12.16□□□□□ -0.46
LYSMD2-204ENST00000560491 A0A1W2PRX2 142 aa12.16□□□□□ -0.46
LYSMD2-204ENST00000560491 KBTBD11O94819 623 aa12.16□□□□□ -0.46
LYSMD2-204ENST00000560491 OR2A4O95047 310 aa12.16□□□□□ -0.46
LYSMD2-204ENST00000560491 CNIH1O95406 144 aa12.16□□□□□ -0.46
LYSMD2-204ENST00000560491 NQO2P16083 231 aa12.16□□□□□ -0.46
LYSMD2-204ENST00000560491 CD83Q01151 205 aa12.16□□□□□ -0.46
LYSMD2-204ENST00000560491 SURF2Q15527 256 aaPredicted RBP12.16□□□□□ -0.46
LYSMD2-204ENST00000560491 TNXAQ16473 311 aa12.16□□□□□ -0.46
LYSMD2-204ENST00000560491 NSUN5P1Q3KNT7 163 aa12.16□□□□□ -0.46
LYSMD2-204ENST00000560491 KHDC1LQ5JSQ8 128 aa12.16□□□□□ -0.46
LYSMD2-204ENST00000560491 C10orf55Q5SWW7 151 aa12.16□□□□□ -0.46
LYSMD2-204ENST00000560491 CCDC71LQ8N9Z2 235 aa12.16□□□□□ -0.46
LYSMD2-204ENST00000560491 SGMS2Q8NHU3 365 aa12.16□□□□□ -0.46
LYSMD2-204ENST00000560491 OR2A7Q96R45 310 aa12.16□□□□□ -0.46
LYSMD2-204ENST00000560491 RTBDNQ9BSG5 229 aaPredicted RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms