RNA–Protein interactions for RNA: ENST00000560207.1

RABGGTA-215, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-215ENST00000560207 KCNIP3Q9Y2W7 256 aa9.57□□□□□ -0.88
RABGGTA-215ENST00000560207 MPPED1O15442 326 aa9.56□□□□□ -0.88
RABGGTA-215ENST00000560207 ACTL6BO94805 426 aa9.56□□□□□ -0.88
RABGGTA-215ENST00000560207 RLN1P04808 185 aa9.56□□□□□ -0.88
RABGGTA-215ENST00000560207 SERPINE2P07093 398 aa9.56□□□□□ -0.88
RABGGTA-215ENST00000560207 IL7P13232 177 aa9.56□□□□□ -0.88
RABGGTA-215ENST00000560207 MDKP21741 143 aaPredicted RBP9.56□□□□□ -0.88
RABGGTA-215ENST00000560207 PIGPP57054 158 aa9.56□□□□□ -0.88
RABGGTA-215ENST00000560207 ERVK-16P61578 105 aa9.56□□□□□ -0.88
RABGGTA-215ENST00000560207 RPL30P62888 115 aaKnown RBP9.56□□□□□ -0.88
RABGGTA-215ENST00000560207 RBMS2Q15434 407 aaKnown RBP9.56□□□□□ -0.88
RABGGTA-215ENST00000560207 CENPVQ7Z7K6 275 aaPredicted RBP9.56□□□□□ -0.88
RABGGTA-215ENST00000560207 OR4D10Q8NGI6 311 aa9.56□□□□□ -0.88
RABGGTA-215ENST00000560207 RHOVQ96L33 236 aa9.56□□□□□ -0.88
RABGGTA-215ENST00000560207 TSC22D3Q99576 134 aa9.56□□□□□ -0.88
RABGGTA-215ENST00000560207 MDFIQ99750 246 aa9.56□□□□□ -0.88
RABGGTA-215ENST00000560207 WNT10AQ9GZT5 417 aa9.56□□□□□ -0.88
RABGGTA-215ENST00000560207 SERTAD4Q9NUC0 356 aa9.56□□□□□ -0.88
RABGGTA-215ENST00000560207 CACFD1Q9UGQ2 172 aa9.56□□□□□ -0.88
RABGGTA-215ENST00000560207 GPR132Q9UNW8 380 aa9.56□□□□□ -0.88
RABGGTA-215ENST00000560207 SIGLEC9Q9Y336 463 aa9.56□□□□□ -0.88
RABGGTA-215ENST00000560207 H0Y980 276 aa9.55□□□□□ -0.88
RABGGTA-215ENST00000560207 TNFSF12O43508 249 aa9.55□□□□□ -0.88
RABGGTA-215ENST00000560207 SLC25A17O43808 307 aa9.55□□□□□ -0.88
RABGGTA-215ENST00000560207 OR2A4O95047 310 aa9.55□□□□□ -0.88
RABGGTA-215ENST00000560207 ANXA3P12429 323 aa9.55□□□□□ -0.88
RABGGTA-215ENST00000560207 UBE2MP61081 183 aaKnown RBP9.55□□□□□ -0.88
RABGGTA-215ENST00000560207 DHODHQ02127 395 aa9.55□□□□□ -0.88
RABGGTA-215ENST00000560207 THOC7Q6I9Y2 204 aaKnown RBP9.55□□□□□ -0.88
RABGGTA-215ENST00000560207 TBC1D26Q86UD7 250 aa9.55□□□□□ -0.88
RABGGTA-215ENST00000560207 SGPP2Q8IWX5 399 aa9.55□□□□□ -0.88
RABGGTA-215ENST00000560207 OR13C8Q8NGS7 320 aa9.55□□□□□ -0.88
RABGGTA-215ENST00000560207 OR51H1Q8NH63 302 aa9.55□□□□□ -0.88
RABGGTA-215ENST00000560207 MARCH1Q8TCQ1 289 aa9.55□□□□□ -0.88
RABGGTA-215ENST00000560207 OR2A7Q96R45 310 aa9.55□□□□□ -0.88
RABGGTA-215ENST00000560207 OR51J1Q9H342 316 aa9.55□□□□□ -0.88
RABGGTA-215ENST00000560207 BET1LQ9NYM9 111 aa9.55□□□□□ -0.88
RABGGTA-215ENST00000560207 C3orf85A0A1B0GTC6 90 aa9.54□□□□□ -0.88
RABGGTA-215ENST00000560207 CNIH1O95406 144 aa9.54□□□□□ -0.88
RABGGTA-215ENST00000560207 IGLV2-23P01705 113 aa9.54□□□□□ -0.88
RABGGTA-215ENST00000560207 CRYGBP07316 175 aa9.54□□□□□ -0.88
RABGGTA-215ENST00000560207 VDAC1P21796 283 aa9.54□□□□□ -0.88
RABGGTA-215ENST00000560207 SLC6A1P30531 599 aa9.54□□□□□ -0.88
RABGGTA-215ENST00000560207 CRIP2P52943 208 aaPredicted RBP9.54□□□□□ -0.88
RABGGTA-215ENST00000560207 SRPXP78539 464 aa9.54□□□□□ -0.88
RABGGTA-215ENST00000560207 BAK1Q16611 211 aa9.54□□□□□ -0.88
RABGGTA-215ENST00000560207 PHLDA2Q53GA4 152 aa9.54□□□□□ -0.88
RABGGTA-215ENST00000560207 AKIRIN2Q53H80 203 aa9.54□□□□□ -0.88
RABGGTA-215ENST00000560207 MZT2BQ6NZ67 158 aa9.54□□□□□ -0.88
RABGGTA-215ENST00000560207 OR4X2Q8NGF9 303 aa9.54□□□□□ -0.88
RABGGTA-215ENST00000560207 WFDC12Q8WWY7 111 aa9.54□□□□□ -0.88
RABGGTA-215ENST00000560207 FBXL15Q9H469 300 aa9.54□□□□□ -0.88
RABGGTA-215ENST00000560207 FKBP11Q9NYL4 201 aa9.54□□□□□ -0.88
RABGGTA-215ENST00000560207 FBN1P35555 2871 aaKnown RBP9.54□□□□□ -0.88
RABGGTA-215ENST00000560207 TNCP24821 2201 aa9.54□□□□□ -0.88
RABGGTA-215ENST00000560207 TET2Q6N021 2002 aaPredicted RBP9.53□□□□□ -0.88
RABGGTA-215ENST00000560207 TEX13DA0A0J9YY54 714 aaPredicted RBP9.53□□□□□ -0.88
RABGGTA-215ENST00000560207 PSMB11A5LHX3 300 aa9.53□□□□□ -0.88
RABGGTA-215ENST00000560207 KBTBD11O94819 623 aa9.53□□□□□ -0.88
RABGGTA-215ENST00000560207 OPN1MWP04001 364 aa9.53□□□□□ -0.88
RABGGTA-215ENST00000560207 OPN1MW2P0DN77 364 aa9.53□□□□□ -0.88
RABGGTA-215ENST00000560207 OPN1MW3P0DN78 364 aa9.53□□□□□ -0.88
RABGGTA-215ENST00000560207 LINC00205P59089 165 aa9.53□□□□□ -0.88
RABGGTA-215ENST00000560207 CX3CL1P78423 397 aa9.53□□□□□ -0.88
RABGGTA-215ENST00000560207 PRSS8Q16651 343 aa9.53□□□□□ -0.88
RABGGTA-215ENST00000560207 TMEM128Q5BJH2 165 aa9.53□□□□□ -0.88
RABGGTA-215ENST00000560207 TEX38Q6PEX7 206 aa9.53□□□□□ -0.88
RABGGTA-215ENST00000560207 HSD17B13Q7Z5P4 300 aaPredicted RBP9.53□□□□□ -0.88
RABGGTA-215ENST00000560207 PUSL1Q8N0Z8 303 aaKnown RBP9.53□□□□□ -0.88
RABGGTA-215ENST00000560207 STPG2Q8N412 459 aa9.53□□□□□ -0.88
RABGGTA-215ENST00000560207 KLHDC1Q8N7A1 406 aa9.53□□□□□ -0.88
RABGGTA-215ENST00000560207 DMBX1Q8NFW5 382 aa9.53□□□□□ -0.88
RABGGTA-215ENST00000560207 SGMS2Q8NHU3 365 aa9.53□□□□□ -0.88
RABGGTA-215ENST00000560207 TMEM167AQ8TBQ9 72 aa9.53□□□□□ -0.88
RABGGTA-215ENST00000560207 R3HDM4Q96D70 268 aa9.53□□□□□ -0.88
RABGGTA-215ENST00000560207 GALNT14Q96FL9 552 aa9.53□□□□□ -0.88
RABGGTA-215ENST00000560207 RITA1Q96K30 269 aa9.53□□□□□ -0.88
RABGGTA-215ENST00000560207 SDHCQ99643 169 aaPredicted RBP9.53□□□□□ -0.88
RABGGTA-215ENST00000560207 SPIN2AQ99865 258 aa9.53□□□□□ -0.88
RABGGTA-215ENST00000560207 SPIN2BQ9BPZ2 258 aa9.53□□□□□ -0.88
RABGGTA-215ENST00000560207 PLXNB1O43157 2135 aa9.53□□□□□ -0.88
RABGGTA-215ENST00000560207 IGHV7-81A0A0B4J1V7 117 aa9.52□□□□□ -0.89
RABGGTA-215ENST00000560207 MARCH11A6NNE9 402 aa9.52□□□□□ -0.89
RABGGTA-215ENST00000560207 SRRM4A7MD48 611 aaKnown RBP9.52□□□□□ -0.89
RABGGTA-215ENST00000560207 HAX1O00165 279 aa9.52□□□□□ -0.89
RABGGTA-215ENST00000560207 RAMP3O60896 148 aa9.52□□□□□ -0.89
RABGGTA-215ENST00000560207 SNAPC5O75971 98 aa9.52□□□□□ -0.89
RABGGTA-215ENST00000560207 ELANEP08246 267 aa9.52□□□□□ -0.89
RABGGTA-215ENST00000560207 SAA1P0DJI8 122 aaPredicted RBP9.52□□□□□ -0.89
RABGGTA-215ENST00000560207 VSIG10L2P0DP72 767 aa9.52□□□□□ -0.89
RABGGTA-215ENST00000560207 UCP1P25874 307 aa9.52□□□□□ -0.89
RABGGTA-215ENST00000560207 CNTFRP26992 372 aa9.52□□□□□ -0.89
RABGGTA-215ENST00000560207 LPAR6P43657 344 aa9.52□□□□□ -0.89
RABGGTA-215ENST00000560207 BRWD1-AS2P59051 145 aa9.52□□□□□ -0.89
RABGGTA-215ENST00000560207 DEFA1P59665 94 aa9.52□□□□□ -0.89
RABGGTA-215ENST00000560207 DEFA3P59666 94 aa9.52□□□□□ -0.89
RABGGTA-215ENST00000560207 FXYD3Q14802 87 aa9.52□□□□□ -0.89
RABGGTA-215ENST00000560207 FBLN7Q53RD9 439 aa9.52□□□□□ -0.89
RABGGTA-215ENST00000560207 OR2B11Q5JQS5 317 aa9.52□□□□□ -0.89
RABGGTA-215ENST00000560207 FAAP20Q6NZ36 180 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms