RNA–Protein interactions for RNA: ENST00000559996.1

HERC1-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-206ENST00000559996 SHPKQ9UHJ6 478 aa7.48□□□□□ -1.21
HERC1-206ENST00000559996 KCNIP3Q9Y2W7 256 aa7.48□□□□□ -1.21
HERC1-206ENST00000559996 PRELID3BQ9Y3B1 194 aa7.48□□□□□ -1.21
HERC1-206ENST00000559996 WASHC3Q9Y3C0 194 aa7.48□□□□□ -1.21
HERC1-206ENST00000559996 TRAV3A0A0B4J244 114 aa7.47□□□□□ -1.21
HERC1-206ENST00000559996 RNF212BA8MTL3 300 aa7.47□□□□□ -1.21
HERC1-206ENST00000559996 MPTX1A8MV57 137 aa7.47□□□□□ -1.21
HERC1-206ENST00000559996 CRLF1O75462 422 aa7.47□□□□□ -1.21
HERC1-206ENST00000559996 MOSP00540 346 aa7.47□□□□□ -1.21
HERC1-206ENST00000559996 IGHV4-59P01825 116 aa7.47□□□□□ -1.21
HERC1-206ENST00000559996 RRASP10301 218 aa7.47□□□□□ -1.21
HERC1-206ENST00000559996 RPA2P15927 270 aa7.47□□□□□ -1.21
HERC1-206ENST00000559996 HLA-GP17693 338 aa7.47□□□□□ -1.21
HERC1-206ENST00000559996 VAMP1P23763 118 aa7.47□□□□□ -1.21
HERC1-206ENST00000559996 G6PCP35575 357 aa7.47□□□□□ -1.21
HERC1-206ENST00000559996 KIR2DS2P43631 304 aa7.47□□□□□ -1.21
HERC1-206ENST00000559996 SSBP2P81877 361 aaPredicted RBP7.47□□□□□ -1.21
HERC1-206ENST00000559996 HNF4GQ14541 408 aa7.47□□□□□ -1.21
HERC1-206ENST00000559996 PSG5Q15238 335 aa7.47□□□□□ -1.21
HERC1-206ENST00000559996 IZUMO4Q1ZYL8 232 aa7.47□□□□□ -1.21
HERC1-206ENST00000559996 LRRC75BQ2VPJ9 315 aa7.47□□□□□ -1.21
HERC1-206ENST00000559996 C4orf46Q504U0 113 aa7.47□□□□□ -1.21
HERC1-206ENST00000559996 DHRS7BQ6IAN0 325 aaPredicted RBP7.47□□□□□ -1.21
HERC1-206ENST00000559996 C12orf45Q8N5I9 185 aaPredicted RBP7.47□□□□□ -1.21
HERC1-206ENST00000559996 TEX29Q8N6K0 151 aa7.47□□□□□ -1.21
HERC1-206ENST00000559996 SIGLECL1Q8N7X8 197 aa7.47□□□□□ -1.21
HERC1-206ENST00000559996 SLC35G3Q8N808 338 aa7.47□□□□□ -1.21
HERC1-206ENST00000559996 Q8N9W7 124 aa7.47□□□□□ -1.21
HERC1-206ENST00000559996 OR4C13Q8NGP0 309 aa7.47□□□□□ -1.21
HERC1-206ENST00000559996 OSR1Q8TAX0 266 aaPredicted RBP7.47□□□□□ -1.21
HERC1-206ENST00000559996 CD300LFQ8TDQ1 290 aa7.47□□□□□ -1.21
HERC1-206ENST00000559996 CASTOR1Q8WTX7 329 aa7.47□□□□□ -1.21
HERC1-206ENST00000559996 IL22RA2Q969J5 263 aa7.47□□□□□ -1.21
HERC1-206ENST00000559996 GPR146Q96CH1 333 aa7.47□□□□□ -1.21
HERC1-206ENST00000559996 FLYWCH2Q96CP2 140 aaKnown RBP7.47□□□□□ -1.21
HERC1-206ENST00000559996 LIN7CQ9NUP9 197 aaKnown RBP7.47□□□□□ -1.21
HERC1-206ENST00000559996 CDC42EP3Q9UKI2 254 aa7.47□□□□□ -1.21
HERC1-206ENST00000559996 FAM96BQ9Y3D0 163 aa7.47□□□□□ -1.21
HERC1-206ENST00000559996 TNCP24821 2201 aa7.47□□□□□ -1.21
HERC1-206ENST00000559996 PLXNB1O43157 2135 aa7.46□□□□□ -1.21
HERC1-206ENST00000559996 H3BUX3 64 aa7.46□□□□□ -1.22
HERC1-206ENST00000559996 H7C2Y5 167 aa7.46□□□□□ -1.22
HERC1-206ENST00000559996 FCN1O00602 326 aa7.46□□□□□ -1.22
HERC1-206ENST00000559996 ADAP1O75689 374 aa7.46□□□□□ -1.22
HERC1-206ENST00000559996 KRASP01116 189 aa7.46□□□□□ -1.22
HERC1-206ENST00000559996 APOA2P02652 100 aa7.46□□□□□ -1.22
HERC1-206ENST00000559996 OR9G9P0C7N8 305 aa7.46□□□□□ -1.22
HERC1-206ENST00000559996 SAA1P0DJI8 122 aaPredicted RBP7.46□□□□□ -1.22
HERC1-206ENST00000559996 S100GP29377 79 aa7.46□□□□□ -1.22
HERC1-206ENST00000559996 BRS3P32247 399 aa7.46□□□□□ -1.22
HERC1-206ENST00000559996 SRP14P37108 136 aaKnown RBP7.46□□□□□ -1.22
HERC1-206ENST00000559996 LGALS7P47929 136 aa7.46□□□□□ -1.22
HERC1-206ENST00000559996 RPS16P62249 146 aaKnown RBP7.46□□□□□ -1.22
HERC1-206ENST00000559996 IL15RAQ13261 267 aa7.46□□□□□ -1.22
HERC1-206ENST00000559996 NMSQ5H8A3 153 aa7.46□□□□□ -1.22
HERC1-206ENST00000559996 LGI3Q8N145 548 aa7.46□□□□□ -1.22
HERC1-206ENST00000559996 FAM71E2Q8N5Q1 922 aa7.46□□□□□ -1.22
HERC1-206ENST00000559996 OR2T10Q8NGZ9 312 aa7.46□□□□□ -1.22
HERC1-206ENST00000559996 OR4S2Q8NH73 311 aa7.46□□□□□ -1.22
HERC1-206ENST00000559996 CHAC2Q8WUX2 184 aa7.46□□□□□ -1.22
HERC1-206ENST00000559996 RBPMSQ93062 196 aaKnown RBP7.46□□□□□ -1.22
HERC1-206ENST00000559996 OR10C1Q96KK4 312 aa7.46□□□□□ -1.22
HERC1-206ENST00000559996 RBM14Q96PK6 669 aaKnown RBP7.46□□□□□ -1.22
HERC1-206ENST00000559996 OR51J1Q9H342 316 aa7.46□□□□□ -1.22
HERC1-206ENST00000559996 TPSG1Q9NRR2 321 aa7.46□□□□□ -1.22
HERC1-206ENST00000559996 COMMD9Q9P000 198 aa7.46□□□□□ -1.22
HERC1-206ENST00000559996 TCF19Q9Y242 345 aa7.46□□□□□ -1.22
HERC1-206ENST00000559996 A0A1B0GW64 132 aa7.45□□□□□ -1.22
HERC1-206ENST00000559996 CGB1A6NKQ9 187 aa7.45□□□□□ -1.22
HERC1-206ENST00000559996 MARCH11A6NNE9 402 aa7.45□□□□□ -1.22
HERC1-206ENST00000559996 E7EUB6 86 aa7.45□□□□□ -1.22
HERC1-206ENST00000559996 SHOXO15266 292 aa7.45□□□□□ -1.22
HERC1-206ENST00000559996 HOXA3O43365 443 aaPredicted RBP7.45□□□□□ -1.22
HERC1-206ENST00000559996 CHST1O43916 411 aa7.45□□□□□ -1.22
HERC1-206ENST00000559996 CREBL2O60519 120 aaPredicted RBP7.45□□□□□ -1.22
HERC1-206ENST00000559996 PITX3O75364 302 aa7.45□□□□□ -1.22
HERC1-206ENST00000559996 SERPINE2P07093 398 aa7.45□□□□□ -1.22
HERC1-206ENST00000559996 FAM106CPP0CH98 169 aa7.45□□□□□ -1.22
HERC1-206ENST00000559996 NQO2P16083 231 aa7.45□□□□□ -1.22
HERC1-206ENST00000559996 SRD5A1P18405 259 aa7.45□□□□□ -1.22
HERC1-206ENST00000559996 CXCL3P19876 107 aa7.45□□□□□ -1.22
HERC1-206ENST00000559996 UBE2KP61086 200 aa7.45□□□□□ -1.22
HERC1-206ENST00000559996 PJVKQ0ZLH3 352 aa7.45□□□□□ -1.22
HERC1-206ENST00000559996 CBX3Q13185 183 aa7.45□□□□□ -1.22
HERC1-206ENST00000559996 LY6EQ16553 131 aa7.45□□□□□ -1.22
HERC1-206ENST00000559996 RTL8BQ17RB0 113 aa7.45□□□□□ -1.22
HERC1-206ENST00000559996 TMEM268Q5VZI3 342 aa7.45□□□□□ -1.22
HERC1-206ENST00000559996 GGNBP1Q5YKI7 109 aa7.45□□□□□ -1.22
HERC1-206ENST00000559996 OR4A47Q6IF82 309 aa7.45□□□□□ -1.22
HERC1-206ENST00000559996 Q6ZS46 218 aa7.45□□□□□ -1.22
HERC1-206ENST00000559996 TMEM219Q86XT9 240 aa7.45□□□□□ -1.22
HERC1-206ENST00000559996 TEX45Q8NA69 505 aa7.45□□□□□ -1.22
HERC1-206ENST00000559996 OR11H7Q8NGC8 314 aa7.45□□□□□ -1.22
HERC1-206ENST00000559996 LSM10Q969L4 123 aaKnown RBP7.45□□□□□ -1.22
HERC1-206ENST00000559996 R3HDM4Q96D70 268 aa7.45□□□□□ -1.22
HERC1-206ENST00000559996 RHOVQ96L33 236 aa7.45□□□□□ -1.22
HERC1-206ENST00000559996 BET1LQ9NYM9 111 aa7.45□□□□□ -1.22
HERC1-206ENST00000559996 SIGLEC9Q9Y336 463 aa7.45□□□□□ -1.22
HERC1-206ENST00000559996 TET2Q6N021 2002 aaPredicted RBP7.45□□□□□ -1.22
HERC1-206ENST00000559996 MTORP42345 2549 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms