RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 FGF12P61328 243 aa11.95□□□□□ -0.5
CSPG4P12-202ENST00000559989 ORMDL3Q8N138 153 aa11.95□□□□□ -0.5
CSPG4P12-202ENST00000559989 AKAP11Q9UKA4 1901 aa11.95□□□□□ -0.5
CSPG4P12-202ENST00000559989 CXCL2P19875 107 aa11.95□□□□□ -0.5
CSPG4P12-202ENST00000559989 TMPRSS3P57727 454 aa11.95□□□□□ -0.5
CSPG4P12-202ENST00000559989 NR2C2APQ86WQ0 139 aa11.95□□□□□ -0.5
CSPG4P12-202ENST00000559989 LAMTOR3Q9UHA4 124 aa11.95□□□□□ -0.5
CSPG4P12-202ENST00000559989 PMS2CLQ68D20 193 aa11.94□□□□□ -0.5
CSPG4P12-202ENST00000559989 DNM1P46Q6ZS02 220 aa11.94□□□□□ -0.5
CSPG4P12-202ENST00000559989 CALYQ9NYX4 217 aa11.94□□□□□ -0.5
CSPG4P12-202ENST00000559989 DPM2O94777 84 aa11.94□□□□□ -0.5
CSPG4P12-202ENST00000559989 UCP3P55916 312 aa11.94□□□□□ -0.5
CSPG4P12-202ENST00000559989 DNAJC30Q96LL9 226 aa11.94□□□□□ -0.5
CSPG4P12-202ENST00000559989 SFXN3Q9BWM7 321 aa11.94□□□□□ -0.5
CSPG4P12-202ENST00000559989 SIRT4Q9Y6E7 314 aaPredicted RBP11.94□□□□□ -0.5
CSPG4P12-202ENST00000559989 TRAV9-1A0A075B6T8 112 aa11.94□□□□□ -0.5
CSPG4P12-202ENST00000559989 MGST3O14880 152 aa11.94□□□□□ -0.5
CSPG4P12-202ENST00000559989 RNASE4P34096 147 aaKnown RBP11.94□□□□□ -0.5
CSPG4P12-202ENST00000559989 GPX4P36969 197 aaPredicted RBP11.94□□□□□ -0.5
CSPG4P12-202ENST00000559989 ST6GALNAC6Q969X2 333 aa11.94□□□□□ -0.5
CSPG4P12-202ENST00000559989 NPCDR1Q9BY65 106 aa11.94□□□□□ -0.5
CSPG4P12-202ENST00000559989 NHP2Q9NX24 153 aaKnown RBP11.94□□□□□ -0.5
CSPG4P12-202ENST00000559989 DOT1LQ8TEK3 1739 aa11.94□□□□□ -0.5
CSPG4P12-202ENST00000559989 NDUFA2O43678 99 aa11.94□□□□□ -0.5
CSPG4P12-202ENST00000559989 CT55Q8WUE5 264 aa11.94□□□□□ -0.5
CSPG4P12-202ENST00000559989 H0YL77 283 aa11.94□□□□□ -0.5
CSPG4P12-202ENST00000559989 MAGEA5P43359 124 aa11.94□□□□□ -0.5
CSPG4P12-202ENST00000559989 TNFRSF9Q07011 255 aa11.94□□□□□ -0.5
CSPG4P12-202ENST00000559989 CEACAM21Q3KPI0 293 aa11.94□□□□□ -0.5
CSPG4P12-202ENST00000559989 TUBGCP6Q96RT7 1819 aa11.94□□□□□ -0.5
CSPG4P12-202ENST00000559989 COL16A1Q07092 1604 aaPredicted RBP11.94□□□□□ -0.5
CSPG4P12-202ENST00000559989 TMEM252Q8N6L7 170 aa11.94□□□□□ -0.5
CSPG4P12-202ENST00000559989 MYF5P13349 255 aa11.94□□□□□ -0.5
CSPG4P12-202ENST00000559989 GATD1Q8NB37 220 aa11.94□□□□□ -0.5
CSPG4P12-202ENST00000559989 KDM3BQ7LBC6 1761 aa11.93□□□□□ -0.5
CSPG4P12-202ENST00000559989 HOXD4P09016 255 aaPredicted RBP11.93□□□□□ -0.5
CSPG4P12-202ENST00000559989 MRPL52Q86TS9 123 aaKnown RBP11.93□□□□□ -0.5
CSPG4P12-202ENST00000559989 ARID1AO14497 2285 aa11.93□□□□□ -0.5
CSPG4P12-202ENST00000559989 SPTY2D1-AS1A0A0U1RR47 76 aa11.93□□□□□ -0.5
CSPG4P12-202ENST00000559989 ODAMA1E959 279 aa11.93□□□□□ -0.5
CSPG4P12-202ENST00000559989 CCL21O00585 134 aa11.93□□□□□ -0.5
CSPG4P12-202ENST00000559989 TMEM30BQ3MIR4 351 aa11.93□□□□□ -0.5
CSPG4P12-202ENST00000559989 OR11H4Q8NGC9 324 aa11.93□□□□□ -0.5
CSPG4P12-202ENST00000559989 LINC01587Q99440 93 aa11.93□□□□□ -0.5
CSPG4P12-202ENST00000559989 LINC00587B1AMM8 73 aa11.93□□□□□ -0.5
CSPG4P12-202ENST00000559989 TMEM229AB2RXF0 380 aa11.93□□□□□ -0.5
CSPG4P12-202ENST00000559989 EGR1P18146 543 aa11.93□□□□□ -0.5
CSPG4P12-202ENST00000559989 POC1AQ8NBT0 407 aa11.93□□□□□ -0.5
CSPG4P12-202ENST00000559989 ERG28Q9UKR5 140 aa11.93□□□□□ -0.5
CSPG4P12-202ENST00000559989 C5P01031 1676 aa11.93□□□□□ -0.5
CSPG4P12-202ENST00000559989 KCPQ6ZWJ8 1503 aa11.93□□□□□ -0.5
CSPG4P12-202ENST00000559989 A0A0U1RQV5 110 aa11.93□□□□□ -0.5
CSPG4P12-202ENST00000559989 DCAF10Q5QP82 559 aa11.93□□□□□ -0.5
CSPG4P12-202ENST00000559989 WDYHV1Q96HA8 205 aa11.93□□□□□ -0.5
CSPG4P12-202ENST00000559989 TMEM30AQ9NV96 361 aa11.93□□□□□ -0.5
CSPG4P12-202ENST00000559989 SPTBP11277 2137 aa11.93□□□□□ -0.5
CSPG4P12-202ENST00000559989 NPIPB11E5RHQ5 1161 aa11.93□□□□□ -0.5
CSPG4P12-202ENST00000559989 EDIL3O43854 480 aa11.93□□□□□ -0.5
CSPG4P12-202ENST00000559989 HMGA2P52926 109 aa11.93□□□□□ -0.5
CSPG4P12-202ENST00000559989 TRGV2A0A075B6R0 118 aa11.93□□□□□ -0.5
CSPG4P12-202ENST00000559989 SAMD5Q5TGI4 173 aa11.93□□□□□ -0.5
CSPG4P12-202ENST00000559989 MORN3Q6PF18 240 aaPredicted RBP11.93□□□□□ -0.5
CSPG4P12-202ENST00000559989 SELENOHQ8IZQ5 122 aaKnown RBP11.93□□□□□ -0.5
CSPG4P12-202ENST00000559989 ITLN2Q8WWU7 325 aaPredicted RBP11.93□□□□□ -0.5
CSPG4P12-202ENST00000559989 ST20Q9HBF5 79 aa11.93□□□□□ -0.5
CSPG4P12-202ENST00000559989 REG1AP05451 166 aa11.92□□□□□ -0.5
CSPG4P12-202ENST00000559989 ATP5IP56385 69 aaPredicted RBP11.92□□□□□ -0.5
CSPG4P12-202ENST00000559989 THSD4Q6ZMP0 1018 aa11.92□□□□□ -0.5
CSPG4P12-202ENST00000559989 COQ2Q96H96 371 aa11.92□□□□□ -0.5
CSPG4P12-202ENST00000559989 IGHV3-72A0A0B4J1Y9 119 aa11.92□□□□□ -0.5
CSPG4P12-202ENST00000559989 TRAV24A0A0B4J272 114 aa11.92□□□□□ -0.5
CSPG4P12-202ENST00000559989 IGHV5-51A0A0C4DH38 117 aa11.92□□□□□ -0.5
CSPG4P12-202ENST00000559989 C1orf185Q5T7R7 199 aa11.92□□□□□ -0.5
CSPG4P12-202ENST00000559989 TDHQ8IZJ6 230 aa11.92□□□□□ -0.5
CSPG4P12-202ENST00000559989 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.92□□□□□ -0.5
CSPG4P12-202ENST00000559989 HBDP02042 147 aa11.92□□□□□ -0.5
CSPG4P12-202ENST00000559989 FBXW9Q5XUX1 488 aa11.92□□□□□ -0.5
CSPG4P12-202ENST00000559989 SHISA4Q96DD7 197 aa11.92□□□□□ -0.5
CSPG4P12-202ENST00000559989 CCL13Q99616 98 aa11.92□□□□□ -0.5
CSPG4P12-202ENST00000559989 MIXL1Q9H2W2 232 aa11.92□□□□□ -0.5
CSPG4P12-202ENST00000559989 DOCK2Q92608 1830 aa11.92□□□□□ -0.5
CSPG4P12-202ENST00000559989 SPINT1O43278 529 aa11.92□□□□□ -0.5
CSPG4P12-202ENST00000559989 BGLAPP02818 100 aa11.92□□□□□ -0.5
CSPG4P12-202ENST00000559989 CYP2G1PQ6ZSU1 146 aa11.92□□□□□ -0.5
CSPG4P12-202ENST00000559989 DEFB124Q8NES8 71 aa11.92□□□□□ -0.5
CSPG4P12-202ENST00000559989 TOGARAM1Q9Y4F4 1720 aa11.92□□□□□ -0.5
CSPG4P12-202ENST00000559989 ITGB1BP1O14713 200 aa11.92□□□□□ -0.5
CSPG4P12-202ENST00000559989 TM4SF4P48230 202 aa11.92□□□□□ -0.5
CSPG4P12-202ENST00000559989 RND3P61587 244 aa11.92□□□□□ -0.5
CSPG4P12-202ENST00000559989 JPT2Q9H910 190 aa11.92□□□□□ -0.5
CSPG4P12-202ENST00000559989 C21orf140B9A014 251 aa11.91□□□□□ -0.5
CSPG4P12-202ENST00000559989 GCHFRP30047 84 aa11.91□□□□□ -0.5
CSPG4P12-202ENST00000559989 SRSF1Q07955 248 aaKnown RBP eCLIP11.91□□□□□ -0.5
CSPG4P12-202ENST00000559989 MYOGP15173 224 aa11.91□□□□□ -0.5
CSPG4P12-202ENST00000559989 HSPE1P61604 102 aaKnown RBP11.91□□□□□ -0.5
CSPG4P12-202ENST00000559989 MAJINQ3KP22 176 aa11.91□□□□□ -0.5
CSPG4P12-202ENST00000559989 LDLRAD1Q5T700 205 aa11.91□□□□□ -0.5
CSPG4P12-202ENST00000559989 SUMO4Q6EEV6 95 aa11.91□□□□□ -0.5
CSPG4P12-202ENST00000559989 IGLV3-27P01718 113 aa11.91□□□□□ -0.5
CSPG4P12-202ENST00000559989 SMIM8Q96KF7 97 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms