RNA–Protein interactions for RNA: ENST00000559886.1

HERC1-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 1 (best)

Gene HERC1, Length 2,462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-205ENST00000559886 OR2T35Q8NGX2 323 aa9.82□□□□□ -0.84
HERC1-205ENST00000559886 CFHR4Q92496 578 aa9.82□□□□□ -0.84
HERC1-205ENST00000559886 FLYWCH2Q96CP2 140 aaKnown RBP9.82□□□□□ -0.84
HERC1-205ENST00000559886 RANBP3Q9H6Z4 567 aaPredicted RBP9.82□□□□□ -0.84
HERC1-205ENST00000559886 A0A1B0GU03 582 aa9.81□□□□□ -0.84
HERC1-205ENST00000559886 HRASP01112 189 aa9.81□□□□□ -0.84
HERC1-205ENST00000559886 IZUMO4Q1ZYL8 232 aa9.81□□□□□ -0.84
HERC1-205ENST00000559886 RUSC1-AS1Q66K80 236 aa9.81□□□□□ -0.84
HERC1-205ENST00000559886 Q6ZRM9 215 aa9.81□□□□□ -0.84
HERC1-205ENST00000559886 RHOVQ96L33 236 aa9.81□□□□□ -0.84
HERC1-205ENST00000559886 GSKIPQ9P0R6 139 aa9.81□□□□□ -0.84
HERC1-205ENST00000559886 SRRM4A7MD48 611 aaKnown RBP9.81□□□□□ -0.84
HERC1-205ENST00000559886 G3V3Q6 166 aa9.81□□□□□ -0.84
HERC1-205ENST00000559886 SMLR1H3BR10 107 aa9.81□□□□□ -0.84
HERC1-205ENST00000559886 SHOXO15266 292 aa9.81□□□□□ -0.84
HERC1-205ENST00000559886 PAX6P26367 422 aa9.81□□□□□ -0.84
HERC1-205ENST00000559886 CD1BP29016 333 aa9.81□□□□□ -0.84
HERC1-205ENST00000559886 ERVK-16P61578 105 aa9.81□□□□□ -0.84
HERC1-205ENST00000559886 Q5BKY6 102 aa9.81□□□□□ -0.84
HERC1-205ENST00000559886 BRD3OSQ6XYD6 125 aa9.81□□□□□ -0.84
HERC1-205ENST00000559886 H2BFWTQ7Z2G1 175 aa9.81□□□□□ -0.84
HERC1-205ENST00000559886 VKORC1L1Q8N0U8 176 aa9.81□□□□□ -0.84
HERC1-205ENST00000559886 DMBX1Q8NFW5 382 aa9.81□□□□□ -0.84
HERC1-205ENST00000559886 PPP1R1CQ8WVI7 109 aa9.81□□□□□ -0.84
HERC1-205ENST00000559886 AIFM2Q9BRQ8 373 aa9.81□□□□□ -0.84
HERC1-205ENST00000559886 TNCP24821 2201 aa9.8□□□□□ -0.84
HERC1-205ENST00000559886 PITX3O75364 302 aa9.8□□□□□ -0.84
HERC1-205ENST00000559886 SMCO1Q147U7 214 aa9.8□□□□□ -0.84
HERC1-205ENST00000559886 THOC7Q6I9Y2 204 aaKnown RBP9.8□□□□□ -0.84
HERC1-205ENST00000559886 OR4D5Q8NGN0 318 aa9.8□□□□□ -0.84
HERC1-205ENST00000559886 HARBI1Q96MB7 349 aa9.8□□□□□ -0.84
HERC1-205ENST00000559886 MS4A7Q9GZW8 240 aaPredicted RBP9.8□□□□□ -0.84
HERC1-205ENST00000559886 COA4Q9NYJ1 87 aa9.8□□□□□ -0.84
HERC1-205ENST00000559886 CACNG5Q9UF02 275 aa9.8□□□□□ -0.84
HERC1-205ENST00000559886 FAM90A9PA6NNJ1 464 aa9.8□□□□□ -0.84
HERC1-205ENST00000559886 VENTXO95231 258 aa9.8□□□□□ -0.84
HERC1-205ENST00000559886 C1QBP02746 253 aa9.8□□□□□ -0.84
HERC1-205ENST00000559886 ARHGDIBP52566 201 aa9.8□□□□□ -0.84
HERC1-205ENST00000559886 BPIFB3P59826 476 aa9.8□□□□□ -0.84
HERC1-205ENST00000559886 RPS16P62249 146 aaKnown RBP9.8□□□□□ -0.84
HERC1-205ENST00000559886 SSX9Q7RTT3 188 aa9.8□□□□□ -0.84
HERC1-205ENST00000559886 ACANP16112 2415 aa9.8□□□□□ -0.84
HERC1-205ENST00000559886 TLN2Q9Y4G6 2542 aa9.8□□□□□ -0.84
HERC1-205ENST00000559886 TET2Q6N021 2002 aaPredicted RBP9.8□□□□□ -0.84
HERC1-205ENST00000559886 FSHBP01225 129 aa9.79□□□□□ -0.84
HERC1-205ENST00000559886 LGALS7P47929 136 aa9.79□□□□□ -0.84
HERC1-205ENST00000559886 OR4A47Q6IF82 309 aa9.79□□□□□ -0.84
HERC1-205ENST00000559886 RITA1Q96K30 269 aa9.79□□□□□ -0.84
HERC1-205ENST00000559886 RNF5Q99942 180 aa9.79□□□□□ -0.84
HERC1-205ENST00000559886 TMEM140Q9NV12 185 aa9.79□□□□□ -0.84
HERC1-205ENST00000559886 BOLA2-SMG1P6H3BVE0 249 aa9.79□□□□□ -0.84
HERC1-205ENST00000559886 IGLV2-23P01705 113 aa9.79□□□□□ -0.84
HERC1-205ENST00000559886 HNRNPCP07910 306 aaKnown RBP eCLIP9.79□□□□□ -0.84
HERC1-205ENST00000559886 IL6RP08887 468 aaPredicted RBP9.79□□□□□ -0.84
HERC1-205ENST00000559886 OR9G9P0C7N8 305 aa9.79□□□□□ -0.84
HERC1-205ENST00000559886 PSMB6P28072 239 aa9.79□□□□□ -0.84
HERC1-205ENST00000559886 KRTAP1-1Q07627 177 aa9.79□□□□□ -0.84
HERC1-205ENST00000559886 FGL1Q08830 312 aa9.79□□□□□ -0.84
HERC1-205ENST00000559886 ZFP69Q49AA0 526 aa9.79□□□□□ -0.84
HERC1-205ENST00000559886 TRAV14DV4A0A0A6YYC5 116 aa9.78□□□□□ -0.84
HERC1-205ENST00000559886 A0A0U1RQK1 487 aa9.78□□□□□ -0.84
HERC1-205ENST00000559886 MPC2O95563 127 aa9.78□□□□□ -0.84
HERC1-205ENST00000559886 MBPP02686 304 aaPredicted RBP9.78□□□□□ -0.84
HERC1-205ENST00000559886 SAA1P0DJI8 122 aaPredicted RBP9.78□□□□□ -0.84
HERC1-205ENST00000559886 RAB32Q13637 225 aa9.78□□□□□ -0.84
HERC1-205ENST00000559886 LRRC37A5PQ49AS3 106 aa9.78□□□□□ -0.84
HERC1-205ENST00000559886 PUSL1Q8N0Z8 303 aaKnown RBP9.78□□□□□ -0.84
HERC1-205ENST00000559886 OR1S1Q8NH92 325 aa9.78□□□□□ -0.84
HERC1-205ENST00000559886 NANPQ8TBE9 248 aa9.78□□□□□ -0.84
HERC1-205ENST00000559886 MEGF9Q9H1U4 602 aa9.78□□□□□ -0.84
HERC1-205ENST00000559886 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.78□□□□□ -0.84
HERC1-205ENST00000559886 BET1LQ9NYM9 111 aa9.78□□□□□ -0.84
HERC1-205ENST00000559886 OTOGQ6ZRI0 2925 aa9.78□□□□□ -0.84
HERC1-205ENST00000559886 IGKV1D-33P01593 117 aa9.78□□□□□ -0.84
HERC1-205ENST00000559886 IGKV1-33P01594 117 aa9.78□□□□□ -0.84
HERC1-205ENST00000559886 BRS3P32247 399 aa9.78□□□□□ -0.84
HERC1-205ENST00000559886 ID3Q02535 119 aa9.78□□□□□ -0.84
HERC1-205ENST00000559886 EBI3Q14213 229 aa9.78□□□□□ -0.84
HERC1-205ENST00000559886 CXorf66Q5JRM2 361 aaPredicted RBP9.78□□□□□ -0.84
HERC1-205ENST00000559886 CD5LO43866 347 aa9.77□□□□□ -0.85
HERC1-205ENST00000559886 MOSP00540 346 aa9.77□□□□□ -0.85
HERC1-205ENST00000559886 SNRNP70P08621 437 aaKnown RBP9.77□□□□□ -0.85
HERC1-205ENST00000559886 CD24P25063 80 aa9.77□□□□□ -0.85
HERC1-205ENST00000559886 NKX2-1P43699 371 aaPredicted RBP9.77□□□□□ -0.85
HERC1-205ENST00000559886 UBE2KP61086 200 aa9.77□□□□□ -0.85
HERC1-205ENST00000559886 RELBQ01201 579 aa9.77□□□□□ -0.85
HERC1-205ENST00000559886 AARDQ4LEZ3 155 aa9.77□□□□□ -0.85
HERC1-205ENST00000559886 OR11H4Q8NGC9 324 aa9.77□□□□□ -0.85
HERC1-205ENST00000559886 EAF1Q96JC9 268 aaPredicted RBP9.77□□□□□ -0.85
HERC1-205ENST00000559886 TSNAXQ99598 290 aaKnown RBP9.77□□□□□ -0.85
HERC1-205ENST00000559886 NUP50Q9UKX7 468 aa9.77□□□□□ -0.85
HERC1-205ENST00000559886 TRAV3A0A0B4J244 114 aa9.77□□□□□ -0.85
HERC1-205ENST00000559886 ST8SIA3O43173 380 aa9.77□□□□□ -0.85
HERC1-205ENST00000559886 SCGB1D2O95969 90 aa9.77□□□□□ -0.85
HERC1-205ENST00000559886 DYNLT3P51808 116 aa9.77□□□□□ -0.85
HERC1-205ENST00000559886 C11orf87Q6NUJ2 197 aa9.77□□□□□ -0.85
HERC1-205ENST00000559886 NOXA1Q86UR1 476 aa9.77□□□□□ -0.85
HERC1-205ENST00000559886 THNSL2Q86YJ6 484 aa9.77□□□□□ -0.85
HERC1-205ENST00000559886 OR2T10Q8NGZ9 312 aa9.77□□□□□ -0.85
HERC1-205ENST00000559886 VSTM2AQ8TAG5 236 aa9.77□□□□□ -0.85
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