RNA–Protein interactions for RNA: ENST00000559834.1

HDDC3-204, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,076 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-204ENST00000559834 SRD5A3Q9H8P0 318 aa6.93□□□□□ -1.3
HDDC3-204ENST00000559834 RETNQ9HD89 108 aa6.93□□□□□ -1.3
HDDC3-204ENST00000559834 ZNF230Q9UIE0 474 aaPredicted RBP6.93□□□□□ -1.3
HDDC3-204ENST00000559834 KCNK7Q9Y2U2 307 aa6.93□□□□□ -1.3
HDDC3-204ENST00000559834 HUWE1Q7Z6Z7 4374 aaKnown RBP6.92□□□□□ -1.3
HDDC3-204ENST00000559834 TMEM272A0A1B0GTI8 110 aa6.92□□□□□ -1.3
HDDC3-204ENST00000559834 DPPA5A6NC42 116 aa6.92□□□□□ -1.3
HDDC3-204ENST00000559834 RBMY1BA6NDE4 496 aaKnown RBP6.92□□□□□ -1.3
HDDC3-204ENST00000559834 RBMY1EA6NEQ0 496 aaKnown RBP6.92□□□□□ -1.3
HDDC3-204ENST00000559834 C2orf70A6NJV1 201 aa6.92□□□□□ -1.3
HDDC3-204ENST00000559834 CASQ2O14958 399 aaPredicted RBP6.92□□□□□ -1.3
HDDC3-204ENST00000559834 RBMXL2O75526 392 aaKnown RBP6.92□□□□□ -1.3
HDDC3-204ENST00000559834 SLC22A5O76082 557 aa6.92□□□□□ -1.3
HDDC3-204ENST00000559834 OR2C1O95371 312 aa6.92□□□□□ -1.3
HDDC3-204ENST00000559834 DHFRP00374 187 aa6.92□□□□□ -1.3
HDDC3-204ENST00000559834 PRH1P02810 166 aa6.92□□□□□ -1.3
HDDC3-204ENST00000559834 CTXN2P0C2S0 81 aa6.92□□□□□ -1.3
HDDC3-204ENST00000559834 RBMY1DP0C7P1 496 aaKnown RBP6.92□□□□□ -1.3
HDDC3-204ENST00000559834 FOLR2P14207 255 aa6.92□□□□□ -1.3
HDDC3-204ENST00000559834 GNB3P16520 340 aa6.92□□□□□ -1.3
HDDC3-204ENST00000559834 RPS25P62851 125 aaKnown RBP6.92□□□□□ -1.3
HDDC3-204ENST00000559834 MLLT11Q13015 90 aaPredicted RBP6.92□□□□□ -1.3
HDDC3-204ENST00000559834 IRF3Q14653 427 aa6.92□□□□□ -1.3
HDDC3-204ENST00000559834 C15orf32Q32M92 178 aa6.92□□□□□ -1.3
HDDC3-204ENST00000559834 ANKRD55Q3KP44 614 aa6.92□□□□□ -1.3
HDDC3-204ENST00000559834 FAM106AQ4KMX7 169 aa6.92□□□□□ -1.3
HDDC3-204ENST00000559834 GPHB5Q86YW7 130 aa6.92□□□□□ -1.3
HDDC3-204ENST00000559834 H1FOOQ8IZA3 346 aaPredicted RBP6.92□□□□□ -1.3
HDDC3-204ENST00000559834 VSTM2AQ8TAG5 236 aa6.92□□□□□ -1.3
HDDC3-204ENST00000559834 FAM110AQ9BQ89 295 aa6.92□□□□□ -1.3
HDDC3-204ENST00000559834 OR51E2Q9H255 320 aa6.92□□□□□ -1.3
HDDC3-204ENST00000559834 ZNF430Q9H8G1 570 aaPredicted RBP6.92□□□□□ -1.3
HDDC3-204ENST00000559834 ZC4H2Q9NQZ6 224 aa6.92□□□□□ -1.3
HDDC3-204ENST00000559834 ZNF257Q9Y2Q1 563 aa6.92□□□□□ -1.3
HDDC3-204ENST00000559834 MRPS7Q9Y2R9 242 aaKnown RBP6.92□□□□□ -1.3
HDDC3-204ENST00000559834 A0A075B6Q4 140 aa6.91□□□□□ -1.3
HDDC3-204ENST00000559834 LINC00473A8K010 186 aa6.91□□□□□ -1.3
HDDC3-204ENST00000559834 RAB27BO00194 218 aa6.91□□□□□ -1.3
HDDC3-204ENST00000559834 RGS10O43665 173 aa6.91□□□□□ -1.3
HDDC3-204ENST00000559834 FCGR3BO75015 233 aa6.91□□□□□ -1.3
HDDC3-204ENST00000559834 OR2J3O76001 311 aa6.91□□□□□ -1.3
HDDC3-204ENST00000559834 SAA1P0DJI8 122 aaPredicted RBP6.91□□□□□ -1.3
HDDC3-204ENST00000559834 HIST1H1DP16402 221 aaKnown RBP6.91□□□□□ -1.3
HDDC3-204ENST00000559834 CD36P16671 472 aa6.91□□□□□ -1.3
HDDC3-204ENST00000559834 RAB6AP20340 208 aa6.91□□□□□ -1.3
HDDC3-204ENST00000559834 CBLN1P23435 193 aa6.91□□□□□ -1.3
HDDC3-204ENST00000559834 ZNF45Q02386 682 aa6.91□□□□□ -1.3
HDDC3-204ENST00000559834 HES5Q5TA89 166 aa6.91□□□□□ -1.3
HDDC3-204ENST00000559834 ZNF57Q68EA5 555 aaPredicted RBP6.91□□□□□ -1.3
HDDC3-204ENST00000559834 Q6ZS49 121 aa6.91□□□□□ -1.3
HDDC3-204ENST00000559834 C5orf30Q96GV9 206 aa6.91□□□□□ -1.3
HDDC3-204ENST00000559834 FBXL7Q9UJT9 491 aa6.91□□□□□ -1.3
HDDC3-204ENST00000559834 ZNF320A2RRD8 509 aa6.9□□□□□ -1.3
HDDC3-204ENST00000559834 IFITM5A6NNB3 132 aa6.9□□□□□ -1.3
HDDC3-204ENST00000559834 NPIPB5A8MRT5 1133 aa6.9□□□□□ -1.3
HDDC3-204ENST00000559834 PPP5D1E7EU14 171 aa6.9□□□□□ -1.3
HDDC3-204ENST00000559834 J3QRK9 145 aa6.9□□□□□ -1.3
HDDC3-204ENST00000559834 MFNGO00587 321 aa6.9□□□□□ -1.3
HDDC3-204ENST00000559834 HIST1H1BP16401 226 aaKnown RBP6.9□□□□□ -1.3
HDDC3-204ENST00000559834 DTYMKP23919 212 aa6.9□□□□□ -1.3
HDDC3-204ENST00000559834 MAS1LP35410 378 aa6.9□□□□□ -1.3
HDDC3-204ENST00000559834 ARL3P36405 182 aa6.9□□□□□ -1.3
HDDC3-204ENST00000559834 FABP5Q01469 135 aa6.9□□□□□ -1.3
HDDC3-204ENST00000559834 OR4A47Q6IF82 309 aa6.9□□□□□ -1.3
HDDC3-204ENST00000559834 KCTD9Q7L273 389 aa6.9□□□□□ -1.3
HDDC3-204ENST00000559834 ZNF645Q8N7E2 425 aa6.9□□□□□ -1.3
HDDC3-204ENST00000559834 OR52B4Q8NGK2 314 aa6.9□□□□□ -1.3
HDDC3-204ENST00000559834 MAFIPQ8WZ33 124 aa6.9□□□□□ -1.3
HDDC3-204ENST00000559834 EEF1AKMT3Q96AZ1 226 aa6.9□□□□□ -1.3
HDDC3-204ENST00000559834 WDR89Q96FK6 387 aaPredicted RBP6.9□□□□□ -1.3
HDDC3-204ENST00000559834 OR2A7Q96R45 310 aa6.9□□□□□ -1.3
HDDC3-204ENST00000559834 MGLLQ99685 303 aa6.9□□□□□ -1.3
HDDC3-204ENST00000559834 AIFM2Q9BRQ8 373 aa6.9□□□□□ -1.3
HDDC3-204ENST00000559834 CCDC90BQ9GZT6 254 aa6.9□□□□□ -1.3
HDDC3-204ENST00000559834 DUSP21Q9H596 190 aa6.9□□□□□ -1.3
HDDC3-204ENST00000559834 SLC2A9Q9NRM0 540 aa6.9□□□□□ -1.3
HDDC3-204ENST00000559834 RBMX2Q9Y388 322 aaKnown RBP6.9□□□□□ -1.3
HDDC3-204ENST00000559834 OR2W1Q9Y3N9 320 aa6.9□□□□□ -1.3
HDDC3-204ENST00000559834 LOC102724200A0A096LPH7 203 aaPredicted RBP6.89□□□□□ -1.31
HDDC3-204ENST00000559834 TRAV1-2A0A0B4J238 106 aa6.89□□□□□ -1.31
HDDC3-204ENST00000559834 HMX3A6NHT5 357 aa6.89□□□□□ -1.31
HDDC3-204ENST00000559834 HRASP01112 189 aa6.89□□□□□ -1.31
HDDC3-204ENST00000559834 HLA-AP01891 365 aaKnown RBP6.89□□□□□ -1.31
HDDC3-204ENST00000559834 HLA-DQB1P01920 261 aa6.89□□□□□ -1.31
HDDC3-204ENST00000559834 DEFA4P12838 97 aa6.89□□□□□ -1.31
HDDC3-204ENST00000559834 MYL9P24844 172 aa6.89□□□□□ -1.31
HDDC3-204ENST00000559834 RPL27AP46776 148 aaKnown RBP6.89□□□□□ -1.31
HDDC3-204ENST00000559834 PLA2G7Q13093 441 aa6.89□□□□□ -1.31
HDDC3-204ENST00000559834 CDNFQ49AH0 187 aa6.89□□□□□ -1.31
HDDC3-204ENST00000559834 C10orf55Q5SWW7 151 aa6.89□□□□□ -1.31
HDDC3-204ENST00000559834 CLEC19AQ6UXS0 136 aa6.89□□□□□ -1.31
HDDC3-204ENST00000559834 PRSS48Q7RTY5 328 aa6.89□□□□□ -1.31
HDDC3-204ENST00000559834 UXS1Q8NBZ7 420 aa6.89□□□□□ -1.31
HDDC3-204ENST00000559834 OR4S2Q8NH73 311 aa6.89□□□□□ -1.31
HDDC3-204ENST00000559834 TMEM167AQ8TBQ9 72 aa6.89□□□□□ -1.31
HDDC3-204ENST00000559834 NRG4Q8WWG1 115 aa6.89□□□□□ -1.31
HDDC3-204ENST00000559834 MARC2Q969Z3 335 aa6.89□□□□□ -1.31
HDDC3-204ENST00000559834 FYTTD1Q96QD9 318 aaKnown RBP6.89□□□□□ -1.31
HDDC3-204ENST00000559834 HSD17B10Q99714 261 aaKnown RBP6.89□□□□□ -1.31
HDDC3-204ENST00000559834 ST6GALNAC5Q9BVH7 336 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms