RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 ZNF785A8K8V0 405 aa9.88□□□□□ -0.83
TPM1-220ENST00000559556 CREBL2O60519 120 aaPredicted RBP9.88□□□□□ -0.83
TPM1-220ENST00000559556 TUSC2O75896 110 aa9.88□□□□□ -0.83
TPM1-220ENST00000559556 RBMY1DP0C7P1 496 aaKnown RBP9.88□□□□□ -0.83
TPM1-220ENST00000559556 HSMCR30P0CW71 290 aa9.88□□□□□ -0.83
TPM1-220ENST00000559556 SAA1P0DJI8 122 aaPredicted RBP9.88□□□□□ -0.83
TPM1-220ENST00000559556 HIST1H1DP16402 221 aaKnown RBP9.88□□□□□ -0.83
TPM1-220ENST00000559556 GADD45AP24522 165 aa9.88□□□□□ -0.83
TPM1-220ENST00000559556 PSMD7P51665 324 aa9.88□□□□□ -0.83
TPM1-220ENST00000559556 FABP5Q01469 135 aa9.88□□□□□ -0.83
TPM1-220ENST00000559556 CDK10Q15131 360 aa9.88□□□□□ -0.83
TPM1-220ENST00000559556 FAM209BQ5JX69 171 aa9.88□□□□□ -0.83
TPM1-220ENST00000559556 HES5Q5TA89 166 aa9.88□□□□□ -0.83
TPM1-220ENST00000559556 H1FOOQ8IZA3 346 aaPredicted RBP9.88□□□□□ -0.83
TPM1-220ENST00000559556 NECAP1Q8NC96 275 aa9.88□□□□□ -0.83
TPM1-220ENST00000559556 OR10R2Q8NGX6 335 aa9.88□□□□□ -0.83
TPM1-220ENST00000559556 MAFIPQ8WZ33 124 aa9.88□□□□□ -0.83
TPM1-220ENST00000559556 SPIN2AQ99865 258 aa9.88□□□□□ -0.83
TPM1-220ENST00000559556 SPIN2BQ9BPZ2 258 aa9.88□□□□□ -0.83
TPM1-220ENST00000559556 GINS4Q9BRT9 223 aa9.88□□□□□ -0.83
TPM1-220ENST00000559556 CENPOQ9BU64 300 aa9.88□□□□□ -0.83
TPM1-220ENST00000559556 DUSP21Q9H596 190 aa9.88□□□□□ -0.83
TPM1-220ENST00000559556 RBM7Q9Y580 266 aaKnown RBP9.88□□□□□ -0.83
TPM1-220ENST00000559556 DNAH10Q8IVF4 4471 aa9.88□□□□□ -0.83
TPM1-220ENST00000559556 RAB27BO00194 218 aa9.87□□□□□ -0.83
TPM1-220ENST00000559556 PRH1P02810 166 aa9.87□□□□□ -0.83
TPM1-220ENST00000559556 CD7P09564 240 aa9.87□□□□□ -0.83
TPM1-220ENST00000559556 GNB3P16520 340 aa9.87□□□□□ -0.83
TPM1-220ENST00000559556 ATP5G2Q06055 141 aa9.87□□□□□ -0.83
TPM1-220ENST00000559556 DEFB114Q30KQ6 69 aa9.87□□□□□ -0.83
TPM1-220ENST00000559556 MMD2Q8IY49 270 aa9.87□□□□□ -0.83
TPM1-220ENST00000559556 TTC9CQ8N5M4 171 aa9.87□□□□□ -0.83
TPM1-220ENST00000559556 DEFB125Q8N687 156 aa9.87□□□□□ -0.83
TPM1-220ENST00000559556 DYNLRB2Q8TF09 96 aa9.87□□□□□ -0.83
TPM1-220ENST00000559556 KCTD12Q96CX2 325 aaKnown RBP9.87□□□□□ -0.83
TPM1-220ENST00000559556 WFDC10AQ9H1F0 79 aa9.87□□□□□ -0.83
TPM1-220ENST00000559556 SRD5A3Q9H8P0 318 aa9.87□□□□□ -0.83
TPM1-220ENST00000559556 ACOT13Q9NPJ3 140 aa9.87□□□□□ -0.83
TPM1-220ENST00000559556 TPRKBQ9Y3C4 175 aa9.87□□□□□ -0.83
TPM1-220ENST00000559556 DMRT1Q9Y5R6 373 aa9.87□□□□□ -0.83
TPM1-220ENST00000559556 HECTD4Q9Y4D8 3996 aa9.87□□□□□ -0.83
TPM1-220ENST00000559556 C2orf70A6NJV1 201 aa9.86□□□□□ -0.83
TPM1-220ENST00000559556 LGALS9O00182 355 aa9.86□□□□□ -0.83
TPM1-220ENST00000559556 RGS10O43665 173 aa9.86□□□□□ -0.83
TPM1-220ENST00000559556 ACTL6BO94805 426 aa9.86□□□□□ -0.83
TPM1-220ENST00000559556 RAB6AP20340 208 aa9.86□□□□□ -0.83
TPM1-220ENST00000559556 C15orf32Q32M92 178 aa9.86□□□□□ -0.83
TPM1-220ENST00000559556 C10orf55Q5SWW7 151 aa9.86□□□□□ -0.83
TPM1-220ENST00000559556 SLC25A42Q86VD7 318 aa9.86□□□□□ -0.83
TPM1-220ENST00000559556 ZNF645Q8N7E2 425 aa9.86□□□□□ -0.83
TPM1-220ENST00000559556 MGLLQ99685 303 aa9.86□□□□□ -0.83
TPM1-220ENST00000559556 TECRQ9NZ01 308 aaKnown RBP9.86□□□□□ -0.83
TPM1-220ENST00000559556 ZNF257Q9Y2Q1 563 aa9.86□□□□□ -0.83
TPM1-220ENST00000559556 A0A075B6Q4 140 aa9.85□□□□□ -0.83
TPM1-220ENST00000559556 IGKV1D-8A0A087WSZ0 117 aa9.85□□□□□ -0.83
TPM1-220ENST00000559556 TRAV1-2A0A0B4J238 106 aa9.85□□□□□ -0.83
TPM1-220ENST00000559556 IFITM5A6NNB3 132 aa9.85□□□□□ -0.83
TPM1-220ENST00000559556 OR11H12B2RN74 326 aa9.85□□□□□ -0.83
TPM1-220ENST00000559556 PPP5D1E7EU14 171 aa9.85□□□□□ -0.83
TPM1-220ENST00000559556 FOLR2P14207 255 aa9.85□□□□□ -0.83
TPM1-220ENST00000559556 EDN2P20800 178 aa9.85□□□□□ -0.83
TPM1-220ENST00000559556 KIR2DS2P43631 304 aa9.85□□□□□ -0.83
TPM1-220ENST00000559556 OR10A3P58181 314 aa9.85□□□□□ -0.83
TPM1-220ENST00000559556 KCTD9Q7L273 389 aa9.85□□□□□ -0.83
TPM1-220ENST00000559556 PRSS48Q7RTY5 328 aa9.85□□□□□ -0.83
TPM1-220ENST00000559556 CNBD2Q96M20 576 aa9.85□□□□□ -0.83
TPM1-220ENST00000559556 YTHDF1Q9BYJ9 559 aaKnown RBP9.85□□□□□ -0.83
TPM1-220ENST00000559556 AGRNO00468 2067 aa9.84□□□□□ -0.83
TPM1-220ENST00000559556 NPIPB5A8MRT5 1133 aa9.84□□□□□ -0.83
TPM1-220ENST00000559556 A8MWP6 167 aa9.84□□□□□ -0.83
TPM1-220ENST00000559556 TEX22C9J3V5 150 aa9.84□□□□□ -0.83
TPM1-220ENST00000559556 FCGR3BO75015 233 aa9.84□□□□□ -0.83
TPM1-220ENST00000559556 GGCTO75223 188 aaKnown RBP9.84□□□□□ -0.83
TPM1-220ENST00000559556 OR2J3O76001 311 aa9.84□□□□□ -0.83
TPM1-220ENST00000559556 KBTBD11O94819 623 aa9.84□□□□□ -0.83
TPM1-220ENST00000559556 DTYMKP23919 212 aa9.84□□□□□ -0.83
TPM1-220ENST00000559556 TALDO1P37837 337 aa9.84□□□□□ -0.83
TPM1-220ENST00000559556 ARFRP1Q13795 201 aa9.84□□□□□ -0.83
TPM1-220ENST00000559556 WDR89Q96FK6 387 aaPredicted RBP9.84□□□□□ -0.83
TPM1-220ENST00000559556 BLOC1S6Q9UL45 172 aa9.84□□□□□ -0.83
TPM1-220ENST00000559556 MRPS7Q9Y2R9 242 aaKnown RBP9.84□□□□□ -0.83
TPM1-220ENST00000559556 PRELID3BQ9Y3B1 194 aa9.84□□□□□ -0.83
TPM1-220ENST00000559556 VPS13DQ5THJ4 4388 aa9.84□□□□□ -0.83
TPM1-220ENST00000559556 METTL21EPA6NDL7 271 aa9.83□□□□□ -0.84
TPM1-220ENST00000559556 PDCD5O14737 125 aa9.83□□□□□ -0.84
TPM1-220ENST00000559556 SLC22A5O76082 557 aa9.83□□□□□ -0.84
TPM1-220ENST00000559556 IGLV2-14P01704 120 aa9.83□□□□□ -0.84
TPM1-220ENST00000559556 HLA-AP01891 365 aaKnown RBP9.83□□□□□ -0.84
TPM1-220ENST00000559556 HLA-DQB1P01920 261 aa9.83□□□□□ -0.84
TPM1-220ENST00000559556 CD36P16671 472 aa9.83□□□□□ -0.84
TPM1-220ENST00000559556 CRHBPP24387 322 aa9.83□□□□□ -0.84
TPM1-220ENST00000559556 RPL30P62888 115 aaKnown RBP9.83□□□□□ -0.84
TPM1-220ENST00000559556 ARL6IP1Q15041 203 aa9.83□□□□□ -0.84
TPM1-220ENST00000559556 TBCEQ15813 527 aaPredicted RBP9.83□□□□□ -0.84
TPM1-220ENST00000559556 SSX1Q16384 188 aa9.83□□□□□ -0.84
TPM1-220ENST00000559556 GUCA2BQ16661 112 aa9.83□□□□□ -0.84
TPM1-220ENST00000559556 KLK9Q2XQG4 91 aa9.83□□□□□ -0.84
TPM1-220ENST00000559556 GPHB5Q86YW7 130 aa9.83□□□□□ -0.84
TPM1-220ENST00000559556 TMEM167AQ8TBQ9 72 aa9.83□□□□□ -0.84
TPM1-220ENST00000559556 CCDC140Q96MF4 163 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms