RNA–Protein interactions for RNA: ENST00000559245.1

CDC42BPB-205, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-205ENST00000559245 LGALS9O00182 355 aa12.17□□□□□ -0.46
CDC42BPB-205ENST00000559245 DENRO43583 198 aaKnown RBP12.17□□□□□ -0.46
CDC42BPB-205ENST00000559245 ACTL6BO94805 426 aa12.17□□□□□ -0.46
CDC42BPB-205ENST00000559245 GNAO1P09471 354 aa12.17□□□□□ -0.46
CDC42BPB-205ENST00000559245 GSTT2P0CG29 244 aa12.17□□□□□ -0.46
CDC42BPB-205ENST00000559245 GSTT2BP0CG30 244 aa12.17□□□□□ -0.46
CDC42BPB-205ENST00000559245 MRPS15P82914 257 aaKnown RBP12.17□□□□□ -0.46
CDC42BPB-205ENST00000559245 C8orf59Q8N0T1 100 aaPredicted RBP12.17□□□□□ -0.46
CDC42BPB-205ENST00000559245 OSR1Q8TAX0 266 aaPredicted RBP12.17□□□□□ -0.46
CDC42BPB-205ENST00000559245 ADTRPQ96IZ2 230 aa12.17□□□□□ -0.46
CDC42BPB-205ENST00000559245 MND1Q9BWT6 205 aa12.17□□□□□ -0.46
CDC42BPB-205ENST00000559245 FKBP14Q9NWM8 211 aa12.17□□□□□ -0.46
CDC42BPB-205ENST00000559245 AK6Q9Y3D8 172 aaKnown RBP12.17□□□□□ -0.46
CDC42BPB-205ENST00000559245 LOC102724200A0A096LPH7 203 aaPredicted RBP12.16□□□□□ -0.46
CDC42BPB-205ENST00000559245 NUPR2A6NF83 97 aa12.16□□□□□ -0.46
CDC42BPB-205ENST00000559245 CREBL2O60519 120 aaPredicted RBP12.16□□□□□ -0.46
CDC42BPB-205ENST00000559245 FCGR3AP08637 254 aa12.16□□□□□ -0.46
CDC42BPB-205ENST00000559245 SAA1P0DJI8 122 aaPredicted RBP12.16□□□□□ -0.46
CDC42BPB-205ENST00000559245 CBLN1P23435 193 aa12.16□□□□□ -0.46
CDC42BPB-205ENST00000559245 CLDN12P56749 244 aa12.16□□□□□ -0.46
CDC42BPB-205ENST00000559245 CDK10Q15131 360 aa12.16□□□□□ -0.46
CDC42BPB-205ENST00000559245 RAB11BQ15907 218 aa12.16□□□□□ -0.46
CDC42BPB-205ENST00000559245 C10orf55Q5SWW7 151 aa12.16□□□□□ -0.46
CDC42BPB-205ENST00000559245 ZNF57Q68EA5 555 aaPredicted RBP12.16□□□□□ -0.46
CDC42BPB-205ENST00000559245 MMD2Q8IY49 270 aa12.16□□□□□ -0.46
CDC42BPB-205ENST00000559245 TMEM61Q8N0U2 210 aa12.16□□□□□ -0.46
CDC42BPB-205ENST00000559245 OR52B4Q8NGK2 314 aa12.16□□□□□ -0.46
CDC42BPB-205ENST00000559245 DIRAS3O95661 229 aa12.15□□□□□ -0.46
CDC42BPB-205ENST00000559245 SPHARQ15513 63 aa12.15□□□□□ -0.46
CDC42BPB-205ENST00000559245 C2orf76Q3KRA6 126 aa12.15□□□□□ -0.46
CDC42BPB-205ENST00000559245 SLC25A42Q86VD7 318 aa12.15□□□□□ -0.46
CDC42BPB-205ENST00000559245 GPHB5Q86YW7 130 aa12.15□□□□□ -0.46
CDC42BPB-205ENST00000559245 FAM3DQ96BQ1 224 aa12.15□□□□□ -0.46
CDC42BPB-205ENST00000559245 GINS4Q9BRT9 223 aa12.15□□□□□ -0.46
CDC42BPB-205ENST00000559245 MLXQ9UH92 298 aa12.15□□□□□ -0.46
CDC42BPB-205ENST00000559245 ZNF257Q9Y2Q1 563 aa12.15□□□□□ -0.46
CDC42BPB-205ENST00000559245 KCNK7Q9Y2U2 307 aa12.15□□□□□ -0.46
CDC42BPB-205ENST00000559245 LSM2Q9Y333 95 aaKnown RBP12.15□□□□□ -0.46
CDC42BPB-205ENST00000559245 DNAH10Q8IVF4 4471 aa12.15□□□□□ -0.47
CDC42BPB-205ENST00000559245 A0A0J9YWU9 116 aa12.14□□□□□ -0.47
CDC42BPB-205ENST00000559245 TMEM213A2RRL7 107 aa12.14□□□□□ -0.47
CDC42BPB-205ENST00000559245 HMX3A6NHT5 357 aa12.14□□□□□ -0.47
CDC42BPB-205ENST00000559245 CDK1P06493 297 aa12.14□□□□□ -0.47
CDC42BPB-205ENST00000559245 EWSR1Q01844 656 aaKnown RBP eCLIP12.14□□□□□ -0.47
CDC42BPB-205ENST00000559245 TMEM91Q6ZNR0 172 aa12.14□□□□□ -0.47
CDC42BPB-205ENST00000559245 C19orf35Q6ZS72 473 aa12.14□□□□□ -0.47
CDC42BPB-205ENST00000559245 MAFIPQ8WZ33 124 aa12.14□□□□□ -0.47
CDC42BPB-205ENST00000559245 TMEM203Q969S6 136 aa12.14□□□□□ -0.47
CDC42BPB-205ENST00000559245 DCUN1D5Q9BTE7 237 aa12.14□□□□□ -0.47
CDC42BPB-205ENST00000559245 FBXL7Q9UJT9 491 aa12.14□□□□□ -0.47
CDC42BPB-205ENST00000559245 TEX22C9J3V5 150 aa12.13□□□□□ -0.47
CDC42BPB-205ENST00000559245 SCAF4O95104 1147 aaKnown RBP12.13□□□□□ -0.47
CDC42BPB-205ENST00000559245 IGHV3-23P01764 117 aa12.13□□□□□ -0.47
CDC42BPB-205ENST00000559245 ARL3P36405 182 aa12.13□□□□□ -0.47
CDC42BPB-205ENST00000559245 PLA2G7Q13093 441 aa12.13□□□□□ -0.47
CDC42BPB-205ENST00000559245 MED22Q15528 200 aa12.13□□□□□ -0.47
CDC42BPB-205ENST00000559245 ANKRD55Q3KP44 614 aa12.13□□□□□ -0.47
CDC42BPB-205ENST00000559245 LIPKQ5VXJ0 399 aa12.13□□□□□ -0.47
CDC42BPB-205ENST00000559245 CEMP1Q6PRD7 247 aaPredicted RBP12.13□□□□□ -0.47
CDC42BPB-205ENST00000559245 CLEC19AQ6UXS0 136 aa12.13□□□□□ -0.47
CDC42BPB-205ENST00000559245 WFDC3Q8IUB2 231 aa12.13□□□□□ -0.47
CDC42BPB-205ENST00000559245 UXS1Q8NBZ7 420 aa12.13□□□□□ -0.47
CDC42BPB-205ENST00000559245 RAB3CQ96E17 227 aa12.13□□□□□ -0.47
CDC42BPB-205ENST00000559245 CCDC140Q96MF4 163 aa12.13□□□□□ -0.47
CDC42BPB-205ENST00000559245 Q9H521 79 aa12.13□□□□□ -0.47
CDC42BPB-205ENST00000559245 HECTD4Q9Y4D8 3996 aa12.13□□□□□ -0.47
CDC42BPB-205ENST00000559245 HERC2O95714 4834 aa12.12□□□□□ -0.47
CDC42BPB-205ENST00000559245 TMEM272A0A1B0GTI8 110 aa12.12□□□□□ -0.47
CDC42BPB-205ENST00000559245 ZNF320A2RRD8 509 aa12.12□□□□□ -0.47
CDC42BPB-205ENST00000559245 A8MWP6 167 aa12.12□□□□□ -0.47
CDC42BPB-205ENST00000559245 NDUFB8O95169 186 aa12.12□□□□□ -0.47
CDC42BPB-205ENST00000559245 MAP2K4P45985 399 aa12.12□□□□□ -0.47
CDC42BPB-205ENST00000559245 TNFRSF9Q07011 255 aa12.12□□□□□ -0.47
CDC42BPB-205ENST00000559245 FAM106AQ4KMX7 169 aa12.12□□□□□ -0.47
CDC42BPB-205ENST00000559245 TM4SF20Q53R12 229 aa12.12□□□□□ -0.47
CDC42BPB-205ENST00000559245 LYG2Q86SG7 212 aa12.12□□□□□ -0.47
CDC42BPB-205ENST00000559245 H1FOOQ8IZA3 346 aaPredicted RBP12.12□□□□□ -0.47
CDC42BPB-205ENST00000559245 RPP25LQ8N5L8 163 aaKnown RBP12.12□□□□□ -0.47
CDC42BPB-205ENST00000559245 UFD1Q92890 307 aa12.12□□□□□ -0.47
CDC42BPB-205ENST00000559245 RAB22AQ9UL26 194 aa12.12□□□□□ -0.47
CDC42BPB-205ENST00000559245 S4R3C0 116 aa12.12□□□□□ -0.47
CDC42BPB-205ENST00000559245 DPPA5A6NC42 116 aa12.11□□□□□ -0.47
CDC42BPB-205ENST00000559245 NPIPB5A8MRT5 1133 aa12.11□□□□□ -0.47
CDC42BPB-205ENST00000559245 PTGES3LE9PB15 166 aa12.11□□□□□ -0.47
CDC42BPB-205ENST00000559245 FCGR3BO75015 233 aa12.11□□□□□ -0.47
CDC42BPB-205ENST00000559245 ARL6IP5O75915 188 aa12.11□□□□□ -0.47
CDC42BPB-205ENST00000559245 GNB3P16520 340 aa12.11□□□□□ -0.47
CDC42BPB-205ENST00000559245 OR4A47Q6IF82 309 aa12.11□□□□□ -0.47
CDC42BPB-205ENST00000559245 BTNL8Q6UX41 500 aa12.11□□□□□ -0.47
CDC42BPB-205ENST00000559245 KCTD9Q7L273 389 aa12.11□□□□□ -0.47
CDC42BPB-205ENST00000559245 VKORC1L1Q8N0U8 176 aa12.11□□□□□ -0.47
CDC42BPB-205ENST00000559245 FANCD2OSQ96PS1 177 aa12.11□□□□□ -0.47
CDC42BPB-205ENST00000559245 OR51E2Q9H255 320 aa12.11□□□□□ -0.47
CDC42BPB-205ENST00000559245 TP53TG1Q9Y2A0 90 aa12.11□□□□□ -0.47
CDC42BPB-205ENST00000559245 KLK5Q9Y337 293 aaPredicted RBP12.11□□□□□ -0.47
CDC42BPB-205ENST00000559245 A0A075B6Q4 140 aa12.1□□□□□ -0.47
CDC42BPB-205ENST00000559245 E7EUB6 86 aa12.1□□□□□ -0.47
CDC42BPB-205ENST00000559245 J3QRK9 145 aa12.1□□□□□ -0.47
CDC42BPB-205ENST00000559245 MFNGO00587 321 aa12.1□□□□□ -0.47
CDC42BPB-205ENST00000559245 SPRY2O43597 315 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms