RNA–Protein interactions for RNA: ENST00000559193.5

SPG11-215, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 2,579 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-215ENST00000559193 DDTP30046 118 aa13.76□□□□□ -0.21
SPG11-215ENST00000559193 CHRNA7P36544 502 aa13.76□□□□□ -0.21
SPG11-215ENST00000559193 NUBP1P53384 320 aa13.76□□□□□ -0.21
SPG11-215ENST00000559193 TRAT1Q6PIZ9 186 aa13.76□□□□□ -0.21
SPG11-215ENST00000559193 ZNF600Q6ZNG1 722 aa13.76□□□□□ -0.21
SPG11-215ENST00000559193 RAB1CQ92928 201 aa13.76□□□□□ -0.21
SPG11-215ENST00000559193 MEGF10Q96KG7 1140 aa13.76□□□□□ -0.21
SPG11-215ENST00000559193 DERL1Q9BUN8 251 aa13.76□□□□□ -0.21
SPG11-215ENST00000559193 PRDX2P32119 198 aa13.76□□□□□ -0.21
SPG11-215ENST00000559193 PDLIM4P50479 330 aa13.76□□□□□ -0.21
SPG11-215ENST00000559193 TMEM249Q2WGJ8 235 aa13.76□□□□□ -0.21
SPG11-215ENST00000559193 PRAMEF5Q5TYX0 476 aa13.76□□□□□ -0.21
SPG11-215ENST00000559193 C1orf162Q8NEQ5 155 aaPredicted RBP13.76□□□□□ -0.21
SPG11-215ENST00000559193 ACY3Q96HD9 319 aa13.76□□□□□ -0.21
SPG11-215ENST00000559193 PDE6DO43924 150 aa13.75□□□□□ -0.21
SPG11-215ENST00000559193 HPRT1P00492 218 aa13.75□□□□□ -0.21
SPG11-215ENST00000559193 PRSS8Q16651 343 aa13.75□□□□□ -0.21
SPG11-215ENST00000559193 ZNF718Q3SXZ3 478 aa13.75□□□□□ -0.21
SPG11-215ENST00000559193 FAM90A1Q86YD7 464 aa13.75□□□□□ -0.21
SPG11-215ENST00000559193 TMEM37Q8WXS4 190 aa13.75□□□□□ -0.21
SPG11-215ENST00000559193 FAM234AQ9H0X4 552 aa13.75□□□□□ -0.21
SPG11-215ENST00000559193 AURKAIP1Q9NWT8 199 aaPredicted RBP13.75□□□□□ -0.21
SPG11-215ENST00000559193 PRR14LQ5THK1 2151 aa13.75□□□□□ -0.21
SPG11-215ENST00000559193 IGHV2OR16-5A0A0B4J2B6 119 aa13.75□□□□□ -0.21
SPG11-215ENST00000559193 TSTD3H0UI37 97 aa13.75□□□□□ -0.21
SPG11-215ENST00000559193 RRHO14718 337 aa13.75□□□□□ -0.21
SPG11-215ENST00000559193 TMPRSS2O15393 492 aa13.75□□□□□ -0.21
SPG11-215ENST00000559193 PAX1P15863 534 aa13.75□□□□□ -0.21
SPG11-215ENST00000559193 GCH1P30793 250 aa13.75□□□□□ -0.21
SPG11-215ENST00000559193 SPCS3P61009 180 aa13.75□□□□□ -0.21
SPG11-215ENST00000559193 MORN2Q502X0 79 aa13.75□□□□□ -0.21
SPG11-215ENST00000559193 MBNL2Q5VZF2 373 aaKnown RBP13.75□□□□□ -0.21
SPG11-215ENST00000559193 CST9LP1Q5W188 147 aa13.75□□□□□ -0.21
SPG11-215ENST00000559193 TREML4Q6UXN2 200 aa13.75□□□□□ -0.21
SPG11-215ENST00000559193 VKORC1L1Q8N0U8 176 aa13.75□□□□□ -0.21
SPG11-215ENST00000559193 PATZ1Q9HBE1 687 aaKnown RBP13.75□□□□□ -0.21
SPG11-215ENST00000559193 GNG12Q9UBI6 72 aa13.75□□□□□ -0.21
SPG11-215ENST00000559193 IGKV1D-17A0A075B6S4 117 aa13.74□□□□□ -0.21
SPG11-215ENST00000559193 A0A1B0GWJ7 208 aa13.74□□□□□ -0.21
SPG11-215ENST00000559193 FAM90A9PA6NNJ1 464 aa13.74□□□□□ -0.21
SPG11-215ENST00000559193 PRSS46E5RG02 174 aa13.74□□□□□ -0.21
SPG11-215ENST00000559193 M0R1X1 148 aa13.74□□□□□ -0.21
SPG11-215ENST00000559193 IFNA10P01566 189 aa13.74□□□□□ -0.21
SPG11-215ENST00000559193 IGLV1-44P01699 117 aa13.74□□□□□ -0.21
SPG11-215ENST00000559193 VDAC2P45880 294 aaPredicted RBP13.74□□□□□ -0.21
SPG11-215ENST00000559193 RPL39P5Q59GN2 51 aa13.74□□□□□ -0.21
SPG11-215ENST00000559193 CISD2Q8N5K1 135 aaKnown RBP13.74□□□□□ -0.21
SPG11-215ENST00000559193 KCNIP2Q9NS61 270 aa13.74□□□□□ -0.21
SPG11-215ENST00000559193 TRAV3A0A0B4J244 114 aa13.74□□□□□ -0.21
SPG11-215ENST00000559193 IGHV1-18A0A0C4DH31 117 aa13.74□□□□□ -0.21
SPG11-215ENST00000559193 NDUFB4O95168 129 aa13.74□□□□□ -0.21
SPG11-215ENST00000559193 FAM78BQ5VT40 261 aa13.74□□□□□ -0.21
SPG11-215ENST00000559193 REC114Q7Z4M0 266 aa13.74□□□□□ -0.21
SPG11-215ENST00000559193 ZNF114Q8NC26 417 aa13.74□□□□□ -0.21
SPG11-215ENST00000559193 OR4A16Q8NH70 328 aa13.74□□□□□ -0.21
SPG11-215ENST00000559193 MGST2Q99735 147 aa13.74□□□□□ -0.21
SPG11-215ENST00000559193 TUBG2Q9NRH3 451 aa13.74□□□□□ -0.21
SPG11-215ENST00000559193 JPT1Q9UK76 154 aa13.74□□□□□ -0.21
SPG11-215ENST00000559193 ASPMQ8IZT6 3477 aa13.73□□□□□ -0.21
SPG11-215ENST00000559193 A0A1W2PPV4 95 aa13.73□□□□□ -0.21
SPG11-215ENST00000559193 IL3RAP26951 378 aa13.73□□□□□ -0.21
SPG11-215ENST00000559193 OPRK1P41145 380 aa13.73□□□□□ -0.21
SPG11-215ENST00000559193 KCNIP4Q6PIL6 250 aa13.73□□□□□ -0.21
SPG11-215ENST00000559193 MS4A5Q9H3V2 200 aa13.73□□□□□ -0.21
SPG11-215ENST00000559193 A0A087X0M5 115 aa13.73□□□□□ -0.21
SPG11-215ENST00000559193 A0A1B0GX30 115 aa13.73□□□□□ -0.21
SPG11-215ENST00000559193 PGPEP1LA6NFU8 196 aa13.73□□□□□ -0.21
SPG11-215ENST00000559193 MPDU1O75352 247 aa13.73□□□□□ -0.21
SPG11-215ENST00000559193 IGHV3-13P01766 116 aa13.73□□□□□ -0.21
SPG11-215ENST00000559193 IGHV3-7P01780 117 aa13.73□□□□□ -0.21
SPG11-215ENST00000559193 C1QTNF9P0C862 333 aa13.73□□□□□ -0.21
SPG11-215ENST00000559193 CD99P14209 185 aa13.73□□□□□ -0.21
SPG11-215ENST00000559193 MSMPQ1L6U9 139 aa13.73□□□□□ -0.21
SPG11-215ENST00000559193 OR2Z1Q8NG97 314 aa13.73□□□□□ -0.21
SPG11-215ENST00000559193 LOXL4Q96JB6 756 aa13.73□□□□□ -0.21
SPG11-215ENST00000559193 GGTLC1Q9BX51 225 aa13.73□□□□□ -0.21
SPG11-215ENST00000559193 HEYLQ9NQ87 328 aaPredicted RBP13.73□□□□□ -0.21
SPG11-215ENST00000559193 DUSP13Q9UII6 198 aa13.73□□□□□ -0.21
SPG11-215ENST00000559193 SRRM5B3KS81 715 aa13.72□□□□□ -0.21
SPG11-215ENST00000559193 GFRA3O60609 400 aa13.72□□□□□ -0.21
SPG11-215ENST00000559193 ARL14EPLP0DKL9 152 aa13.72□□□□□ -0.21
SPG11-215ENST00000559193 ZNF134P52741 427 aa13.72□□□□□ -0.21
SPG11-215ENST00000559193 LCN2P80188 198 aa13.72□□□□□ -0.21
SPG11-215ENST00000559193 RELBQ01201 579 aa13.72□□□□□ -0.21
SPG11-215ENST00000559193 SRSF6Q13247 344 aaKnown RBP13.72□□□□□ -0.21
SPG11-215ENST00000559193 TMEM144Q7Z5S9 345 aa13.72□□□□□ -0.21
SPG11-215ENST00000559193 OR52E5Q8NH55 327 aa13.72□□□□□ -0.21
SPG11-215ENST00000559193 IFI27L2Q9H2X8 130 aa13.72□□□□□ -0.21
SPG11-215ENST00000559193 NKX2-8O15522 239 aa13.72□□□□□ -0.21
SPG11-215ENST00000559193 SOX15O60248 233 aa13.72□□□□□ -0.21
SPG11-215ENST00000559193 YPEL1O60688 119 aa13.72□□□□□ -0.21
SPG11-215ENST00000559193 LOXL3P58215 753 aa13.72□□□□□ -0.21
SPG11-215ENST00000559193 RPP30P78346 268 aaKnown RBP13.72□□□□□ -0.21
SPG11-215ENST00000559193 PDLIM3Q53GG5 364 aaPredicted RBP13.72□□□□□ -0.21
SPG11-215ENST00000559193 MIC13Q5XKP0 118 aa13.72□□□□□ -0.21
SPG11-215ENST00000559193 DEFB123Q8N688 67 aa13.72□□□□□ -0.21
SPG11-215ENST00000559193 FDCSPQ8NFU4 85 aa13.72□□□□□ -0.21
SPG11-215ENST00000559193 YPEL2Q96QA6 119 aa13.72□□□□□ -0.21
SPG11-215ENST00000559193 PXMP4Q9Y6I8 212 aa13.72□□□□□ -0.21
SPG11-215ENST00000559193 TRBV20OR9-2A0A075B6H5 130 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms