RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 KLHDC1Q8N7A1 406 aa8.58□□□□□ -1.04
TPM1-217ENST00000559108 OR8H1Q8NGG4 311 aa8.58□□□□□ -1.04
TPM1-217ENST00000559108 LHFPL5Q8TAF8 219 aa8.58□□□□□ -1.04
TPM1-217ENST00000559108 CLCC1Q96S66 551 aa8.58□□□□□ -1.04
TPM1-217ENST00000559108 PRRT1Q99946 306 aa8.58□□□□□ -1.04
TPM1-217ENST00000559108 PRSS22Q9GZN4 317 aa8.58□□□□□ -1.04
TPM1-217ENST00000559108 FLVCR2Q9UPI3 526 aa8.58□□□□□ -1.04
TPM1-217ENST00000559108 DNHD1Q96M86 4753 aa8.58□□□□□ -1.04
TPM1-217ENST00000559108 CGB1A6NKQ9 187 aa8.57□□□□□ -1.04
TPM1-217ENST00000559108 E7EUB6 86 aa8.57□□□□□ -1.04
TPM1-217ENST00000559108 G3V318 75 aa8.57□□□□□ -1.04
TPM1-217ENST00000559108 M0QZK8 103 aa8.57□□□□□ -1.04
TPM1-217ENST00000559108 HAX1O00165 279 aa8.57□□□□□ -1.04
TPM1-217ENST00000559108 ATP6V0E1O15342 81 aa8.57□□□□□ -1.04
TPM1-217ENST00000559108 MPPED1O15442 326 aa8.57□□□□□ -1.04
TPM1-217ENST00000559108 RBFOX2O43251 390 aaKnown RBP eCLIP8.57□□□□□ -1.04
TPM1-217ENST00000559108 SPDEFO95238 335 aa8.57□□□□□ -1.04
TPM1-217ENST00000559108 IL6RP08887 468 aaPredicted RBP8.57□□□□□ -1.04
TPM1-217ENST00000559108 LPAR6P43657 344 aa8.57□□□□□ -1.04
TPM1-217ENST00000559108 UBE2KP61086 200 aa8.57□□□□□ -1.04
TPM1-217ENST00000559108 CX3CL1P78423 397 aa8.57□□□□□ -1.04
TPM1-217ENST00000559108 CFHR3Q02985 330 aa8.57□□□□□ -1.04
TPM1-217ENST00000559108 FOXL1Q12952 345 aa8.57□□□□□ -1.04
TPM1-217ENST00000559108 ZNF846Q147U1 533 aa8.57□□□□□ -1.04
TPM1-217ENST00000559108 ASPHD1Q5U4P2 390 aa8.57□□□□□ -1.04
TPM1-217ENST00000559108 SSX9Q7RTT3 188 aa8.57□□□□□ -1.04
TPM1-217ENST00000559108 PUSL1Q8N0Z8 303 aaKnown RBP8.57□□□□□ -1.04
TPM1-217ENST00000559108 C11orf44Q8N8P7 122 aa8.57□□□□□ -1.04
TPM1-217ENST00000559108 OR4S2Q8NH73 311 aa8.57□□□□□ -1.04
TPM1-217ENST00000559108 OR2T6Q8NHC8 308 aa8.57□□□□□ -1.04
TPM1-217ENST00000559108 RNF5Q99942 180 aa8.57□□□□□ -1.04
TPM1-217ENST00000559108 FAM103A1Q9BTL3 118 aaKnown RBP8.57□□□□□ -1.04
TPM1-217ENST00000559108 CCDC32Q9BV29 185 aa8.57□□□□□ -1.04
TPM1-217ENST00000559108 ZNF430Q9H8G1 570 aaPredicted RBP8.57□□□□□ -1.04
TPM1-217ENST00000559108 A0A0G2JRQ6 117 aa8.56□□□□□ -1.04
TPM1-217ENST00000559108 CRYM-AS1A6NIL9 109 aa8.56□□□□□ -1.04
TPM1-217ENST00000559108 DBX1A6NMT0 343 aa8.56□□□□□ -1.04
TPM1-217ENST00000559108 SOX15O60248 233 aa8.56□□□□□ -1.04
TPM1-217ENST00000559108 UPK1BO75841 260 aa8.56□□□□□ -1.04
TPM1-217ENST00000559108 OR5AC1P0C628 307 aa8.56□□□□□ -1.04
TPM1-217ENST00000559108 RRASP10301 218 aa8.56□□□□□ -1.04
TPM1-217ENST00000559108 CD28P10747 220 aa8.56□□□□□ -1.04
TPM1-217ENST00000559108 VDAC2P45880 294 aaPredicted RBP8.56□□□□□ -1.04
TPM1-217ENST00000559108 SURF2Q15527 256 aaPredicted RBP8.56□□□□□ -1.04
TPM1-217ENST00000559108 POU2AF1Q16633 256 aa8.56□□□□□ -1.04
TPM1-217ENST00000559108 PRSS8Q16651 343 aa8.56□□□□□ -1.04
TPM1-217ENST00000559108 IZUMO4Q1ZYL8 232 aa8.56□□□□□ -1.04
TPM1-217ENST00000559108 OR4A47Q6IF82 309 aa8.56□□□□□ -1.04
TPM1-217ENST00000559108 LIN54Q6MZP7 749 aa8.56□□□□□ -1.04
TPM1-217ENST00000559108 LCNL1Q6ZST4 164 aa8.56□□□□□ -1.04
TPM1-217ENST00000559108 SLC35E3Q7Z769 313 aa8.56□□□□□ -1.04
TPM1-217ENST00000559108 OSR1Q8TAX0 266 aaPredicted RBP8.56□□□□□ -1.04
TPM1-217ENST00000559108 S100ZQ8WXG8 99 aa8.56□□□□□ -1.04
TPM1-217ENST00000559108 ZNF486Q96H40 463 aaPredicted RBP8.56□□□□□ -1.04
TPM1-217ENST00000559108 TSNAXQ99598 290 aaKnown RBP8.56□□□□□ -1.04
TPM1-217ENST00000559108 RASL11BQ9BPW5 248 aa8.56□□□□□ -1.04
TPM1-217ENST00000559108 OR51J1Q9H342 316 aa8.56□□□□□ -1.04
TPM1-217ENST00000559108 BEX1Q9HBH7 125 aa8.56□□□□□ -1.04
TPM1-217ENST00000559108 PRELID3BQ9Y3B1 194 aa8.56□□□□□ -1.04
TPM1-217ENST00000559108 ANK2Q01484 3957 aa8.56□□□□□ -1.04
TPM1-217ENST00000559108 ADARB2-AS1A8MUL3 147 aa8.55□□□□□ -1.04
TPM1-217ENST00000559108 H0Y980 276 aa8.55□□□□□ -1.04
TPM1-217ENST00000559108 LYRM1O43325 122 aa8.55□□□□□ -1.04
TPM1-217ENST00000559108 NDUFB6O95139 128 aa8.55□□□□□ -1.04
TPM1-217ENST00000559108 IGKV1-5P01602 117 aa8.55□□□□□ -1.04
TPM1-217ENST00000559108 OR9G9P0C7N8 305 aa8.55□□□□□ -1.04
TPM1-217ENST00000559108 P0C879 139 aa8.55□□□□□ -1.04
TPM1-217ENST00000559108 G6PCP35575 357 aa8.55□□□□□ -1.04
TPM1-217ENST00000559108 LGALS7P47929 136 aa8.55□□□□□ -1.04
TPM1-217ENST00000559108 AP3S2P59780 193 aa8.55□□□□□ -1.04
TPM1-217ENST00000559108 CATR1Q13166 79 aa8.55□□□□□ -1.04
TPM1-217ENST00000559108 LPCAT3Q6P1A2 487 aa8.55□□□□□ -1.04
TPM1-217ENST00000559108 C19orf35Q6ZS72 473 aa8.55□□□□□ -1.04
TPM1-217ENST00000559108 ZNF329Q86UD4 541 aa8.55□□□□□ -1.04
TPM1-217ENST00000559108 PPP1R27Q86WC6 154 aa8.55□□□□□ -1.04
TPM1-217ENST00000559108 CMTM1Q8IZ96 169 aa8.55□□□□□ -1.04
TPM1-217ENST00000559108 STPG2Q8N412 459 aa8.55□□□□□ -1.04
TPM1-217ENST00000559108 CASTOR1Q8WTX7 329 aa8.55□□□□□ -1.04
TPM1-217ENST00000559108 GLYATL2Q8WU03 294 aa8.55□□□□□ -1.04
TPM1-217ENST00000559108 R3HDM4Q96D70 268 aa8.55□□□□□ -1.04
TPM1-217ENST00000559108 SEC22AQ96IW7 307 aa8.55□□□□□ -1.04
TPM1-217ENST00000559108 RHOVQ96L33 236 aa8.55□□□□□ -1.04
TPM1-217ENST00000559108 WDR12Q9GZL7 423 aaKnown RBP8.55□□□□□ -1.04
TPM1-217ENST00000559108 NAA60Q9H7X0 242 aa8.55□□□□□ -1.04
TPM1-217ENST00000559108 PLEKHA2Q9HB19 425 aa8.55□□□□□ -1.04
TPM1-217ENST00000559108 PARP11Q9NR21 331 aa8.55□□□□□ -1.04
TPM1-217ENST00000559108 TMEM140Q9NV12 185 aa8.55□□□□□ -1.04
TPM1-217ENST00000559108 KIAA1456Q9P272 454 aa8.55□□□□□ -1.04
TPM1-217ENST00000559108 SCP2D1Q9UJQ7 156 aa8.55□□□□□ -1.04
TPM1-217ENST00000559108 WSB1Q9Y6I7 421 aa8.55□□□□□ -1.04
TPM1-217ENST00000559108 C3orf85A0A1B0GTC6 90 aa8.54□□□□□ -1.04
TPM1-217ENST00000559108 KBTBD11O94819 623 aa8.54□□□□□ -1.04
TPM1-217ENST00000559108 HPRT1P00492 218 aa8.54□□□□□ -1.04
TPM1-217ENST00000559108 KRASP01116 189 aa8.54□□□□□ -1.04
TPM1-217ENST00000559108 IGF1P05019 195 aa8.54□□□□□ -1.04
TPM1-217ENST00000559108 APELAP0DMC3 54 aa8.54□□□□□ -1.04
TPM1-217ENST00000559108 UCP1P25874 307 aa8.54□□□□□ -1.04
TPM1-217ENST00000559108 PPIFP30405 207 aaKnown RBP8.54□□□□□ -1.04
TPM1-217ENST00000559108 FAUP35544 74 aaKnown RBP8.54□□□□□ -1.04
TPM1-217ENST00000559108 KIR2DS2P43631 304 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms