RNA–Protein interactions for RNA: ENST00000558500.5

LRRC28-207, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-207ENST00000558500 DCTN3O75935 186 aa4.92□□□□□ -1.62
LRRC28-207ENST00000558500 NAPSAO96009 420 aa4.92□□□□□ -1.62
LRRC28-207ENST00000558500 IGHV3-23P01764 117 aa4.92□□□□□ -1.62
LRRC28-207ENST00000558500 P0DMU3 169 aa4.92□□□□□ -1.62
LRRC28-207ENST00000558500 FAM231AP0DMU4 169 aa4.92□□□□□ -1.62
LRRC28-207ENST00000558500 FAM231CP0DMU5 169 aa4.92□□□□□ -1.62
LRRC28-207ENST00000558500 GALP22466 123 aa4.92□□□□□ -1.62
LRRC28-207ENST00000558500 ZBTB25P24278 435 aa4.92□□□□□ -1.62
LRRC28-207ENST00000558500 UBE2KP61086 200 aa4.92□□□□□ -1.62
LRRC28-207ENST00000558500 FLOT2Q14254 428 aa4.92□□□□□ -1.62
LRRC28-207ENST00000558500 MEDAGQ5VYS4 303 aa4.92□□□□□ -1.62
LRRC28-207ENST00000558500 PVRIGQ6DKI7 326 aa4.92□□□□□ -1.62
LRRC28-207ENST00000558500 AWAT2Q6E213 333 aa4.92□□□□□ -1.62
LRRC28-207ENST00000558500 ZNF880Q6PDB4 577 aa4.92□□□□□ -1.62
LRRC28-207ENST00000558500 CLEC19AQ6UXS0 136 aa4.92□□□□□ -1.62
LRRC28-207ENST00000558500 UNQ9165/PRO28630Q6UXU0 137 aa4.92□□□□□ -1.62
LRRC28-207ENST00000558500 JAGN1Q8N5M9 183 aa4.92□□□□□ -1.62
LRRC28-207ENST00000558500 TEX45Q8NA69 505 aa4.92□□□□□ -1.62
LRRC28-207ENST00000558500 SETD9Q8NE22 299 aa4.92□□□□□ -1.62
LRRC28-207ENST00000558500 OR4A5Q8NH83 315 aa4.92□□□□□ -1.62
LRRC28-207ENST00000558500 CD300LFQ8TDQ1 290 aa4.92□□□□□ -1.62
LRRC28-207ENST00000558500 ACOT12Q8WYK0 555 aa4.92□□□□□ -1.62
LRRC28-207ENST00000558500 SPIN2AQ99865 258 aa4.92□□□□□ -1.62
LRRC28-207ENST00000558500 SPIN2BQ9BPZ2 258 aa4.92□□□□□ -1.62
LRRC28-207ENST00000558500 RNF126Q9BV68 326 aa4.92□□□□□ -1.62
LRRC28-207ENST00000558500 KRTAP4-8Q9BYQ9 185 aa4.92□□□□□ -1.62
LRRC28-207ENST00000558500 C6orf62Q9GZU0 229 aaPredicted RBP4.92□□□□□ -1.62
LRRC28-207ENST00000558500 ARGLU1Q9NWB6 273 aaPredicted RBP4.92□□□□□ -1.62
LRRC28-207ENST00000558500 RPL36Q9Y3U8 105 aaKnown RBP4.92□□□□□ -1.62
LRRC28-207ENST00000558500 TRAV8-7A0A075B6U6 113 aa4.91□□□□□ -1.62
LRRC28-207ENST00000558500 OR4C46A6NHA9 309 aa4.91□□□□□ -1.62
LRRC28-207ENST00000558500 C16orf90A8MZG2 172 aa4.91□□□□□ -1.62
LRRC28-207ENST00000558500 TMEM127O75204 238 aa4.91□□□□□ -1.62
LRRC28-207ENST00000558500 AMBPP02760 352 aa4.91□□□□□ -1.62
LRRC28-207ENST00000558500 HLA-DMBP28068 263 aa4.91□□□□□ -1.62
LRRC28-207ENST00000558500 ELLP55199 621 aaPredicted RBP4.91□□□□□ -1.62
LRRC28-207ENST00000558500 SNRPGP62308 76 aaKnown RBP4.91□□□□□ -1.62
LRRC28-207ENST00000558500 CBX3Q13185 183 aa4.91□□□□□ -1.62
LRRC28-207ENST00000558500 ATP6AP1Q15904 470 aa4.91□□□□□ -1.62
LRRC28-207ENST00000558500 VMA21Q3ZAQ7 101 aa4.91□□□□□ -1.62
LRRC28-207ENST00000558500 SOHLH1Q5JUK2 328 aa4.91□□□□□ -1.62
LRRC28-207ENST00000558500 C10orf55Q5SWW7 151 aa4.91□□□□□ -1.62
LRRC28-207ENST00000558500 XAF1Q6GPH4 301 aa4.91□□□□□ -1.62
LRRC28-207ENST00000558500 LAMTOR1Q6IAA8 161 aa4.91□□□□□ -1.62
LRRC28-207ENST00000558500 RPL22L1Q6P5R6 122 aaKnown RBP4.91□□□□□ -1.62
LRRC28-207ENST00000558500 IDO2Q6ZQW0 420 aa4.91□□□□□ -1.62
LRRC28-207ENST00000558500 Q6ZR54 194 aa4.91□□□□□ -1.62
LRRC28-207ENST00000558500 C19orf35Q6ZS72 473 aa4.91□□□□□ -1.62
LRRC28-207ENST00000558500 Q6ZTC4 211 aa4.91□□□□□ -1.62
LRRC28-207ENST00000558500 MOB1BQ7L9L4 216 aa4.91□□□□□ -1.62
LRRC28-207ENST00000558500 C6orf201Q7Z4U5 140 aa4.91□□□□□ -1.62
LRRC28-207ENST00000558500 SLC25A42Q86VD7 318 aa4.91□□□□□ -1.62
LRRC28-207ENST00000558500 APRG1Q8IVJ8 170 aa4.91□□□□□ -1.62
LRRC28-207ENST00000558500 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.91□□□□□ -1.62
LRRC28-207ENST00000558500 SETD6Q8TBK2 473 aa4.91□□□□□ -1.62
LRRC28-207ENST00000558500 NEDD4LQ96PU5 975 aa4.91□□□□□ -1.62
LRRC28-207ENST00000558500 FAAP24Q9BTP7 215 aa4.91□□□□□ -1.62
LRRC28-207ENST00000558500 ZNF430Q9H8G1 570 aaPredicted RBP4.91□□□□□ -1.62
LRRC28-207ENST00000558500 CHMP1AQ9HD42 196 aaPredicted RBP4.91□□□□□ -1.62
LRRC28-207ENST00000558500 SCRT2Q9NQ03 307 aa4.91□□□□□ -1.62
LRRC28-207ENST00000558500 IMPAD1Q9NX62 359 aa4.91□□□□□ -1.62
LRRC28-207ENST00000558500 CKLFQ9UBR5 152 aa4.91□□□□□ -1.62
LRRC28-207ENST00000558500 ZNF257Q9Y2Q1 563 aa4.91□□□□□ -1.62
LRRC28-207ENST00000558500 ARL2BPQ9Y2Y0 163 aa4.91□□□□□ -1.62
LRRC28-207ENST00000558500 UFC1Q9Y3C8 167 aa4.91□□□□□ -1.62
LRRC28-207ENST00000558500 S4R3C0 116 aa4.91□□□□□ -1.62
LRRC28-207ENST00000558500 TRBV5-5A0A0J9YX44 114 aa4.9□□□□□ -1.63
LRRC28-207ENST00000558500 SNTNA6NMZ2 147 aa4.9□□□□□ -1.63
LRRC28-207ENST00000558500 NPIPB5A8MRT5 1133 aa4.9□□□□□ -1.63
LRRC28-207ENST00000558500 CLEC3BP05452 202 aa4.9□□□□□ -1.63
LRRC28-207ENST00000558500 GSTT2P0CG29 244 aa4.9□□□□□ -1.63
LRRC28-207ENST00000558500 GSTT2BP0CG30 244 aa4.9□□□□□ -1.63
LRRC28-207ENST00000558500 MYOD1P15172 320 aa4.9□□□□□ -1.63
LRRC28-207ENST00000558500 CALB2P22676 271 aa4.9□□□□□ -1.63
LRRC28-207ENST00000558500 PSMB6P28072 239 aa4.9□□□□□ -1.63
LRRC28-207ENST00000558500 HLA-DRB3P79483 266 aa4.9□□□□□ -1.63
LRRC28-207ENST00000558500 MED21Q13503 144 aa4.9□□□□□ -1.63
LRRC28-207ENST00000558500 ZNF124Q15973 351 aa4.9□□□□□ -1.63
LRRC28-207ENST00000558500 RTL8BQ17RB0 113 aa4.9□□□□□ -1.63
LRRC28-207ENST00000558500 CCDC58Q4VC31 144 aa4.9□□□□□ -1.63
LRRC28-207ENST00000558500 CEACAM19Q7Z692 300 aa4.9□□□□□ -1.63
LRRC28-207ENST00000558500 CDH26Q8IXH8 852 aa4.9□□□□□ -1.63
LRRC28-207ENST00000558500 Q8NAQ8 132 aa4.9□□□□□ -1.63
LRRC28-207ENST00000558500 OR13C5Q8NGS8 318 aa4.9□□□□□ -1.63
LRRC28-207ENST00000558500 EEF1AKMT3Q96AZ1 226 aa4.9□□□□□ -1.63
LRRC28-207ENST00000558500 THTPAQ9BU02 230 aa4.9□□□□□ -1.63
LRRC28-207ENST00000558500 RDH8Q9NYR8 311 aa4.9□□□□□ -1.63
LRRC28-207ENST00000558500 IGLV2-18A0A075B6J9 118 aa4.89□□□□□ -1.63
LRRC28-207ENST00000558500 TRBV6-6A0A0A6YYG2 114 aa4.89□□□□□ -1.63
LRRC28-207ENST00000558500 IGKV1-6A0A0C4DH72 117 aa4.89□□□□□ -1.63
LRRC28-207ENST00000558500 HMX3A6NHT5 357 aa4.89□□□□□ -1.63
LRRC28-207ENST00000558500 TEX22C9J3V5 150 aa4.89□□□□□ -1.63
LRRC28-207ENST00000558500 DYNC1I1O14576 645 aa4.89□□□□□ -1.63
LRRC28-207ENST00000558500 CREBL2O60519 120 aaPredicted RBP4.89□□□□□ -1.63
LRRC28-207ENST00000558500 ACTL6BO94805 426 aa4.89□□□□□ -1.63
LRRC28-207ENST00000558500 CA1P00915 261 aaPredicted RBP4.89□□□□□ -1.63
LRRC28-207ENST00000558500 LIMS3P0CW19 117 aa4.89□□□□□ -1.63
LRRC28-207ENST00000558500 LIMS4P0CW20 117 aa4.89□□□□□ -1.63
LRRC28-207ENST00000558500 RBMY1A1P0DJD3 496 aaKnown RBP4.89□□□□□ -1.63
LRRC28-207ENST00000558500 RBMY1CP0DJD4 496 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms