RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 UNQ5815/PRO19632Q6UWF5 114 aa6.63□□□□□ -1.35
TPM1-213ENST00000558400 TMEM17Q86X19 198 aa6.63□□□□□ -1.35
TPM1-213ENST00000558400 SNX29P2Q8IUI4 249 aa6.63□□□□□ -1.35
TPM1-213ENST00000558400 LYSMD2Q8IV50 215 aa6.63□□□□□ -1.35
TPM1-213ENST00000558400 MMD2Q8IY49 270 aa6.63□□□□□ -1.35
TPM1-213ENST00000558400 CMTM1Q8IZ96 169 aa6.63□□□□□ -1.35
TPM1-213ENST00000558400 CMYA5Q8N3K9 4069 aa6.63□□□□□ -1.35
TPM1-213ENST00000558400 ZNF491Q8N8L2 437 aa6.63□□□□□ -1.35
TPM1-213ENST00000558400 LFNGQ8NES3 379 aa6.63□□□□□ -1.35
TPM1-213ENST00000558400 C4orf3Q8WVX3 66 aa6.63□□□□□ -1.35
TPM1-213ENST00000558400 TCTEX1D2Q8WW35 142 aa6.63□□□□□ -1.35
TPM1-213ENST00000558400 FCAMRQ8WWV6 532 aa6.63□□□□□ -1.35
TPM1-213ENST00000558400 ARPC1AQ92747 370 aa6.63□□□□□ -1.35
TPM1-213ENST00000558400 RBMXL1Q96E39 390 aaKnown RBP6.63□□□□□ -1.35
TPM1-213ENST00000558400 C5orf30Q96GV9 206 aa6.63□□□□□ -1.35
TPM1-213ENST00000558400 CCL28Q9NRJ3 127 aa6.63□□□□□ -1.35
TPM1-213ENST00000558400 TAS2R8Q9NYW2 309 aa6.63□□□□□ -1.35
TPM1-213ENST00000558400 A0A0G2JLM5 398 aa6.62□□□□□ -1.35
TPM1-213ENST00000558400 A0A1W2PN81 502 aa6.62□□□□□ -1.35
TPM1-213ENST00000558400 ARPC1BO15143 372 aaKnown RBP6.62□□□□□ -1.35
TPM1-213ENST00000558400 BRI3O95415 125 aa6.62□□□□□ -1.35
TPM1-213ENST00000558400 HPRT1P00492 218 aa6.62□□□□□ -1.35
TPM1-213ENST00000558400 PMP2P02689 132 aa6.62□□□□□ -1.35
TPM1-213ENST00000558400 IFNA6P05013 189 aa6.62□□□□□ -1.35
TPM1-213ENST00000558400 FCER2P06734 321 aa6.62□□□□□ -1.35
TPM1-213ENST00000558400 EGR2P11161 476 aaPredicted RBP6.62□□□□□ -1.35
TPM1-213ENST00000558400 TBPP20226 339 aa6.62□□□□□ -1.35
TPM1-213ENST00000558400 LORP23490 312 aaPredicted RBP6.62□□□□□ -1.35
TPM1-213ENST00000558400 HLA-DMAP28067 261 aa6.62□□□□□ -1.35
TPM1-213ENST00000558400 GNRHRP30968 328 aa6.62□□□□□ -1.35
TPM1-213ENST00000558400 MAS1LP35410 378 aa6.62□□□□□ -1.35
TPM1-213ENST00000558400 CHRNA7P36544 502 aa6.62□□□□□ -1.35
TPM1-213ENST00000558400 FXYD4P59646 89 aa6.62□□□□□ -1.35
TPM1-213ENST00000558400 RPL30P62888 115 aaKnown RBP6.62□□□□□ -1.35
TPM1-213ENST00000558400 RUNX1Q01196 453 aa6.62□□□□□ -1.35
TPM1-213ENST00000558400 SSBP1Q04837 148 aaKnown RBP6.62□□□□□ -1.35
TPM1-213ENST00000558400 EIF4EBP1Q13541 118 aaPredicted RBP6.62□□□□□ -1.35
TPM1-213ENST00000558400 SPCS2Q15005 226 aa6.62□□□□□ -1.35
TPM1-213ENST00000558400 PRSS8Q16651 343 aa6.62□□□□□ -1.35
TPM1-213ENST00000558400 ECSCRQ19T08 205 aa6.62□□□□□ -1.35
TPM1-213ENST00000558400 C19orf54Q5BKX5 351 aa6.62□□□□□ -1.35
TPM1-213ENST00000558400 SAMD5Q5TGI4 173 aa6.62□□□□□ -1.35
TPM1-213ENST00000558400 LCNL1Q6ZST4 164 aa6.62□□□□□ -1.35
TPM1-213ENST00000558400 C8orf86Q6ZUL3 223 aa6.62□□□□□ -1.35
TPM1-213ENST00000558400 REC114Q7Z4M0 266 aa6.62□□□□□ -1.35
TPM1-213ENST00000558400 MRPL41Q8IXM3 137 aaKnown RBP6.62□□□□□ -1.35
TPM1-213ENST00000558400 MYOZ3Q8TDC0 251 aa6.62□□□□□ -1.35
TPM1-213ENST00000558400 MOB3AQ96BX8 217 aa6.62□□□□□ -1.35
TPM1-213ENST00000558400 RHOVQ96L33 236 aa6.62□□□□□ -1.35
TPM1-213ENST00000558400 P2RX4Q99571 388 aa6.62□□□□□ -1.35
TPM1-213ENST00000558400 SPIN2AQ99865 258 aa6.62□□□□□ -1.35
TPM1-213ENST00000558400 SPIN2BQ9BPZ2 258 aa6.62□□□□□ -1.35
TPM1-213ENST00000558400 ZNF2Q9BSG1 426 aaPredicted RBP6.62□□□□□ -1.35
TPM1-213ENST00000558400 CCDC59Q9P031 241 aaKnown RBP6.62□□□□□ -1.35
TPM1-213ENST00000558400 EXTL2Q9UBQ6 330 aa6.62□□□□□ -1.35
TPM1-213ENST00000558400 MTFP1Q9UDX5 166 aa6.62□□□□□ -1.35
TPM1-213ENST00000558400 MSGN1A6NI15 193 aa6.61□□□□□ -1.35
TPM1-213ENST00000558400 GPR31O00270 319 aa6.61□□□□□ -1.35
TPM1-213ENST00000558400 CTDSP2O14595 271 aa6.61□□□□□ -1.35
TPM1-213ENST00000558400 OR2A4O95047 310 aa6.61□□□□□ -1.35
TPM1-213ENST00000558400 HRH1P35367 487 aa6.61□□□□□ -1.35
TPM1-213ENST00000558400 UCP3P55916 312 aa6.61□□□□□ -1.35
TPM1-213ENST00000558400 TAS2R31P59538 309 aa6.61□□□□□ -1.35
TPM1-213ENST00000558400 GNB1P62873 340 aa6.61□□□□□ -1.35
TPM1-213ENST00000558400 NDPQ00604 133 aa6.61□□□□□ -1.35
TPM1-213ENST00000558400 PJVKQ0ZLH3 352 aa6.61□□□□□ -1.35
TPM1-213ENST00000558400 KIAA0141Q14154 515 aaPredicted RBP6.61□□□□□ -1.35
TPM1-213ENST00000558400 VAX1Q5SQQ9 334 aa6.61□□□□□ -1.35
TPM1-213ENST00000558400 KPRPQ5T749 579 aaPredicted RBP6.61□□□□□ -1.35
TPM1-213ENST00000558400 ZNF818PQ6ZRF7 136 aa6.61□□□□□ -1.35
TPM1-213ENST00000558400 SLC25A42Q86VD7 318 aa6.61□□□□□ -1.35
TPM1-213ENST00000558400 SPAG16Q8N0X2 631 aa6.61□□□□□ -1.35
TPM1-213ENST00000558400 CADM3Q8N126 398 aa6.61□□□□□ -1.35
TPM1-213ENST00000558400 LINC00482Q8N8I6 264 aa6.61□□□□□ -1.35
TPM1-213ENST00000558400 OR4A5Q8NH83 315 aa6.61□□□□□ -1.35
TPM1-213ENST00000558400 GRPEL2Q8TAA5 225 aa6.61□□□□□ -1.35
TPM1-213ENST00000558400 DYNC2LI1Q8TCX1 351 aa6.61□□□□□ -1.35
TPM1-213ENST00000558400 DPF1Q92782 380 aa6.61□□□□□ -1.35
TPM1-213ENST00000558400 DIRAS2Q96HU8 199 aa6.61□□□□□ -1.35
TPM1-213ENST00000558400 OR2A7Q96R45 310 aa6.61□□□□□ -1.35
TPM1-213ENST00000558400 ABHD1Q96SE0 405 aa6.61□□□□□ -1.35
TPM1-213ENST00000558400 KLK15Q9H2R5 256 aa6.61□□□□□ -1.35
TPM1-213ENST00000558400 ZFAND3Q9H8U3 227 aa6.61□□□□□ -1.35
TPM1-213ENST00000558400 PLEKHA2Q9HB19 425 aa6.61□□□□□ -1.35
TPM1-213ENST00000558400 ZNF355PQ9NSJ1 428 aa6.61□□□□□ -1.35
TPM1-213ENST00000558400 FBXO7Q9Y3I1 522 aa6.61□□□□□ -1.35
TPM1-213ENST00000558400 A3GALT2U3KPV4 340 aa6.61□□□□□ -1.35
TPM1-213ENST00000558400 NOTCH3Q9UM47 2321 aa6.6□□□□□ -1.35
TPM1-213ENST00000558400 G3V4G9 280 aa6.6□□□□□ -1.35
TPM1-213ENST00000558400 H3BMQ9 156 aa6.6□□□□□ -1.35
TPM1-213ENST00000558400 GABARAPH6UMI1 98 aa6.6□□□□□ -1.35
TPM1-213ENST00000558400 I3L521 148 aa6.6□□□□□ -1.35
TPM1-213ENST00000558400 ZNF701M0R085 212 aaPredicted RBP6.6□□□□□ -1.35
TPM1-213ENST00000558400 CTDSPLO15194 276 aa6.6□□□□□ -1.35
TPM1-213ENST00000558400 TNFSF12O43508 249 aa6.6□□□□□ -1.35
TPM1-213ENST00000558400 PGLYRP1O75594 196 aaPredicted RBP6.6□□□□□ -1.35
TPM1-213ENST00000558400 FGF2P09038 288 aa6.6□□□□□ -1.35
TPM1-213ENST00000558400 OR8U8P0C7N1 319 aa6.6□□□□□ -1.35
TPM1-213ENST00000558400 SAA1P0DJI8 122 aaPredicted RBP6.6□□□□□ -1.35
TPM1-213ENST00000558400 IGLL1P15814 213 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms