RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 TINAGL1Q9GZM7 467 aaPredicted RBP9.16□□□□□ -0.94
HERC1-202ENST00000558324 ZNF430Q9H8G1 570 aaPredicted RBP9.16□□□□□ -0.94
HERC1-202ENST00000558324 RANGRFQ9HD47 186 aaPredicted RBP9.16□□□□□ -0.94
HERC1-202ENST00000558324 PRELID3BQ9Y3B1 194 aa9.16□□□□□ -0.94
HERC1-202ENST00000558324 SMAD5-AS1Q9Y6J3 95 aa9.16□□□□□ -0.94
HERC1-202ENST00000558324 MEIS3P1A6NDR6 274 aa9.15□□□□□ -0.94
HERC1-202ENST00000558324 TNFSF12O43508 249 aa9.15□□□□□ -0.94
HERC1-202ENST00000558324 RBMXL2O75526 392 aaKnown RBP9.15□□□□□ -0.94
HERC1-202ENST00000558324 TRBV12-3P01733 135 aa9.15□□□□□ -0.94
HERC1-202ENST00000558324 PRH1P02810 166 aa9.15□□□□□ -0.94
HERC1-202ENST00000558324 OR9G9P0C7N8 305 aa9.15□□□□□ -0.94
HERC1-202ENST00000558324 GP9P14770 177 aa9.15□□□□□ -0.94
HERC1-202ENST00000558324 ZP3P21754 424 aa9.15□□□□□ -0.94
HERC1-202ENST00000558324 AADACP22760 399 aa9.15□□□□□ -0.94
HERC1-202ENST00000558324 SCAND1P57086 179 aa9.15□□□□□ -0.94
HERC1-202ENST00000558324 LSM3P62310 102 aaKnown RBP9.15□□□□□ -0.94
HERC1-202ENST00000558324 DYRK1AQ13627 763 aa9.15□□□□□ -0.94
HERC1-202ENST00000558324 CDK10Q15131 360 aa9.15□□□□□ -0.94
HERC1-202ENST00000558324 ADAD2Q8NCV1 583 aaKnown RBP9.15□□□□□ -0.94
HERC1-202ENST00000558324 SECTM1Q8WVN6 248 aa9.15□□□□□ -0.94
HERC1-202ENST00000558324 TMEM68Q96MH6 324 aa9.15□□□□□ -0.94
HERC1-202ENST00000558324 ELOVL1Q9BW60 279 aa9.15□□□□□ -0.94
HERC1-202ENST00000558324 U3KQK5 164 aa9.15□□□□□ -0.94
HERC1-202ENST00000558324 CREBL2O60519 120 aaPredicted RBP9.14□□□□□ -0.95
HERC1-202ENST00000558324 SLC22A5O76082 557 aa9.14□□□□□ -0.95
HERC1-202ENST00000558324 NHLRC4P0CG21 123 aaPredicted RBP9.14□□□□□ -0.95
HERC1-202ENST00000558324 FCGR2CP31995 323 aa9.14□□□□□ -0.95
HERC1-202ENST00000558324 SYNJ2BPP57105 145 aa9.14□□□□□ -0.95
HERC1-202ENST00000558324 FXYD4P59646 89 aa9.14□□□□□ -0.95
HERC1-202ENST00000558324 TIMM50Q3ZCQ8 353 aa9.14□□□□□ -0.95
HERC1-202ENST00000558324 OVCH2Q7RTZ1 564 aa9.14□□□□□ -0.95
HERC1-202ENST00000558324 HOGA1Q86XE5 327 aa9.14□□□□□ -0.95
HERC1-202ENST00000558324 ANKRD13BQ86YJ7 626 aa9.14□□□□□ -0.95
HERC1-202ENST00000558324 MMD2Q8IY49 270 aa9.14□□□□□ -0.95
HERC1-202ENST00000558324 OR13F1Q8NGS4 319 aa9.14□□□□□ -0.95
HERC1-202ENST00000558324 OR4S2Q8NH73 311 aa9.14□□□□□ -0.95
HERC1-202ENST00000558324 WWC2-AS2Q96NR7 200 aa9.14□□□□□ -0.95
HERC1-202ENST00000558324 HSD17B10Q99714 261 aaKnown RBP9.14□□□□□ -0.95
HERC1-202ENST00000558324 AUNIPQ9H7T9 357 aa9.14□□□□□ -0.95
HERC1-202ENST00000558324 DIABLOQ9NR28 239 aa9.14□□□□□ -0.95
HERC1-202ENST00000558324 CCL28Q9NRJ3 127 aa9.14□□□□□ -0.95
HERC1-202ENST00000558324 PEF1Q9UBV8 284 aaKnown RBP9.14□□□□□ -0.95
HERC1-202ENST00000558324 ADAM30Q9UKF2 790 aa9.14□□□□□ -0.95
HERC1-202ENST00000558324 A0A0A6YYH2 397 aa9.13□□□□□ -0.95
HERC1-202ENST00000558324 HMX3A6NHT5 357 aa9.13□□□□□ -0.95
HERC1-202ENST00000558324 A6NJ64 397 aa9.13□□□□□ -0.95
HERC1-202ENST00000558324 TRIM64CA6NLI5 447 aa9.13□□□□□ -0.95
HERC1-202ENST00000558324 AIREO43918 545 aa9.13□□□□□ -0.95
HERC1-202ENST00000558324 RHOGP84095 191 aa9.13□□□□□ -0.95
HERC1-202ENST00000558324 EIF4EBP1Q13541 118 aaPredicted RBP9.13□□□□□ -0.95
HERC1-202ENST00000558324 EXOSC2Q13868 293 aaKnown RBP9.13□□□□□ -0.95
HERC1-202ENST00000558324 ZNF343Q6P1L6 599 aa9.13□□□□□ -0.95
HERC1-202ENST00000558324 SSX9Q7RTT3 188 aa9.13□□□□□ -0.95
HERC1-202ENST00000558324 MFSD4AQ8N468 514 aa9.13□□□□□ -0.95
HERC1-202ENST00000558324 FYTTD1Q96QD9 318 aaKnown RBP9.13□□□□□ -0.95
HERC1-202ENST00000558324 SPIN2AQ99865 258 aa9.13□□□□□ -0.95
HERC1-202ENST00000558324 SPIN2BQ9BPZ2 258 aa9.13□□□□□ -0.95
HERC1-202ENST00000558324 VCX3AQ9NNX9 186 aa9.13□□□□□ -0.95
HERC1-202ENST00000558324 AKIP1Q9NQ31 210 aa9.13□□□□□ -0.95
HERC1-202ENST00000558324 COL7A1Q02388 2944 aa9.13□□□□□ -0.95
HERC1-202ENST00000558324 KBTBD11O94819 623 aa9.12□□□□□ -0.95
HERC1-202ENST00000558324 OR2A4O95047 310 aa9.12□□□□□ -0.95
HERC1-202ENST00000558324 PPYP01298 95 aa9.12□□□□□ -0.95
HERC1-202ENST00000558324 RPS19P39019 145 aaKnown RBP9.12□□□□□ -0.95
HERC1-202ENST00000558324 BRWD1-AS2P59051 145 aa9.12□□□□□ -0.95
HERC1-202ENST00000558324 ZNF45Q02386 682 aa9.12□□□□□ -0.95
HERC1-202ENST00000558324 KLF5Q13887 457 aaPredicted RBP9.12□□□□□ -0.95
HERC1-202ENST00000558324 RPEL1Q2QD12 228 aa9.12□□□□□ -0.95
HERC1-202ENST00000558324 ZNF66Q6ZN08 573 aa9.12□□□□□ -0.95
HERC1-202ENST00000558324 C19orf35Q6ZS72 473 aa9.12□□□□□ -0.95
HERC1-202ENST00000558324 TMEM17Q86X19 198 aa9.12□□□□□ -0.95
HERC1-202ENST00000558324 SAMD12Q8N8I0 201 aa9.12□□□□□ -0.95
HERC1-202ENST00000558324 TSPAN14Q8NG11 270 aa9.12□□□□□ -0.95
HERC1-202ENST00000558324 OR9G4Q8NGQ1 327 aa9.12□□□□□ -0.95
HERC1-202ENST00000558324 SNAPC3Q92966 411 aa9.12□□□□□ -0.95
HERC1-202ENST00000558324 YIPF6Q96EC8 236 aa9.12□□□□□ -0.95
HERC1-202ENST00000558324 USMG5Q96IX5 58 aa9.12□□□□□ -0.95
HERC1-202ENST00000558324 OR2A7Q96R45 310 aa9.12□□□□□ -0.95
HERC1-202ENST00000558324 SLC5A7Q9GZV3 580 aa9.12□□□□□ -0.95
HERC1-202ENST00000558324 IFT46Q9NQC8 304 aa9.12□□□□□ -0.95
HERC1-202ENST00000558324 A0A087WXM4 84 aa9.11□□□□□ -0.95
HERC1-202ENST00000558324 DPPA5A6NC42 116 aa9.11□□□□□ -0.95
HERC1-202ENST00000558324 FAM223BA6NKX1 122 aa9.11□□□□□ -0.95
HERC1-202ENST00000558324 SULT1C2O00338 296 aa9.11□□□□□ -0.95
HERC1-202ENST00000558324 OR2J3O76001 311 aa9.11□□□□□ -0.95
HERC1-202ENST00000558324 TNFAIP8O95379 198 aa9.11□□□□□ -0.95
HERC1-202ENST00000558324 BRI3O95415 125 aa9.11□□□□□ -0.95
HERC1-202ENST00000558324 IGLV1-51P01701 117 aa9.11□□□□□ -0.95
HERC1-202ENST00000558324 FRMD6-AS1P0C7T7 363 aa9.11□□□□□ -0.95
HERC1-202ENST00000558324 MYOD1P15172 320 aa9.11□□□□□ -0.95
HERC1-202ENST00000558324 RPL27AP46776 148 aaKnown RBP9.11□□□□□ -0.95
HERC1-202ENST00000558324 ATP5G2Q06055 141 aa9.11□□□□□ -0.95
HERC1-202ENST00000558324 UBE2NLQ5JXB2 153 aa9.11□□□□□ -0.95
HERC1-202ENST00000558324 TMEM69Q5SWH9 247 aa9.11□□□□□ -0.95
HERC1-202ENST00000558324 SBSPONQ8IVN8 264 aa9.11□□□□□ -0.95
HERC1-202ENST00000558324 FAM223AQ8IWN6 122 aa9.11□□□□□ -0.95
HERC1-202ENST00000558324 SPAG16Q8N0X2 631 aa9.11□□□□□ -0.95
HERC1-202ENST00000558324 VSTM2AQ8TAG5 236 aa9.11□□□□□ -0.95
HERC1-202ENST00000558324 TMEM167AQ8TBQ9 72 aa9.11□□□□□ -0.95
HERC1-202ENST00000558324 S100A16Q96FQ6 103 aaKnown RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms