RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 SELENOKQ9Y6D0 94 aa3.84□□□□□ -1.79
SPG11-208ENST00000558155 KMT2AQ03164 3969 aa3.83□□□□□ -1.8
SPG11-208ENST00000558155 SRRM4A7MD48 611 aaKnown RBP3.83□□□□□ -1.8
SPG11-208ENST00000558155 MPTX1A8MV57 137 aa3.83□□□□□ -1.8
SPG11-208ENST00000558155 C11orf94C9JXX5 98 aa3.83□□□□□ -1.8
SPG11-208ENST00000558155 M0R1X1 148 aa3.83□□□□□ -1.8
SPG11-208ENST00000558155 OGG1O15527 345 aa3.83□□□□□ -1.8
SPG11-208ENST00000558155 CREBL2O60519 120 aaPredicted RBP3.83□□□□□ -1.8
SPG11-208ENST00000558155 OR2J3O76001 311 aa3.83□□□□□ -1.8
SPG11-208ENST00000558155 HLA-AP01891 365 aaKnown RBP3.83□□□□□ -1.8
SPG11-208ENST00000558155 PRH1P02810 166 aa3.83□□□□□ -1.8
SPG11-208ENST00000558155 S100A9P06702 114 aaKnown RBP3.83□□□□□ -1.8
SPG11-208ENST00000558155 RPL35AP18077 110 aaKnown RBP3.83□□□□□ -1.8
SPG11-208ENST00000558155 EDN2P20800 178 aa3.83□□□□□ -1.8
SPG11-208ENST00000558155 ARL3P36405 182 aa3.83□□□□□ -1.8
SPG11-208ENST00000558155 CMC4P56277 68 aaPredicted RBP3.83□□□□□ -1.8
SPG11-208ENST00000558155 SSTP61278 116 aa3.83□□□□□ -1.8
SPG11-208ENST00000558155 GNGT1P63211 74 aa3.83□□□□□ -1.8
SPG11-208ENST00000558155 PRSS8Q16651 343 aa3.83□□□□□ -1.8
SPG11-208ENST00000558155 RTL8BQ17RB0 113 aa3.83□□□□□ -1.8
SPG11-208ENST00000558155 Q499Y3 187 aa3.83□□□□□ -1.8
SPG11-208ENST00000558155 DNAL1Q4LDG9 190 aa3.83□□□□□ -1.8
SPG11-208ENST00000558155 ZNF585BQ52M93 769 aa3.83□□□□□ -1.8
SPG11-208ENST00000558155 TMEM177Q53S58 311 aa3.83□□□□□ -1.8
SPG11-208ENST00000558155 LAMTOR1Q6IAA8 161 aa3.83□□□□□ -1.8
SPG11-208ENST00000558155 ZNF880Q6PDB4 577 aa3.83□□□□□ -1.8
SPG11-208ENST00000558155 MOB1BQ7L9L4 216 aa3.83□□□□□ -1.8
SPG11-208ENST00000558155 C6orf201Q7Z4U5 140 aa3.83□□□□□ -1.8
SPG11-208ENST00000558155 NR2C2APQ86WQ0 139 aa3.83□□□□□ -1.8
SPG11-208ENST00000558155 CENPSQ8N2Z9 138 aa3.83□□□□□ -1.8
SPG11-208ENST00000558155 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.83□□□□□ -1.8
SPG11-208ENST00000558155 SRSF12Q8WXF0 261 aaKnown RBP3.83□□□□□ -1.8
SPG11-208ENST00000558155 CACNG8Q8WXS5 425 aa3.83□□□□□ -1.8
SPG11-208ENST00000558155 EEF1AKMT3Q96AZ1 226 aa3.83□□□□□ -1.8
SPG11-208ENST00000558155 ORAI1Q96D31 301 aa3.83□□□□□ -1.8
SPG11-208ENST00000558155 GALNT14Q96FL9 552 aa3.83□□□□□ -1.8
SPG11-208ENST00000558155 CENPNQ96H22 339 aaPredicted RBP3.83□□□□□ -1.8
SPG11-208ENST00000558155 HARBI1Q96MB7 349 aa3.83□□□□□ -1.8
SPG11-208ENST00000558155 SPIN2AQ99865 258 aa3.83□□□□□ -1.8
SPG11-208ENST00000558155 SPIN2BQ9BPZ2 258 aa3.83□□□□□ -1.8
SPG11-208ENST00000558155 CSTL1Q9H114 145 aa3.83□□□□□ -1.8
SPG11-208ENST00000558155 C5orf66Q9H5L9 145 aa3.83□□□□□ -1.8
SPG11-208ENST00000558155 MAP6D1Q9H9H5 199 aa3.83□□□□□ -1.8
SPG11-208ENST00000558155 AMBNQ9NP70 447 aa3.83□□□□□ -1.8
SPG11-208ENST00000558155 PLEKHJ1Q9NW61 149 aa3.83□□□□□ -1.8
SPG11-208ENST00000558155 BABAM2Q9NXR7 383 aa3.83□□□□□ -1.8
SPG11-208ENST00000558155 MLXQ9UH92 298 aa3.83□□□□□ -1.8
SPG11-208ENST00000558155 UBQLN2Q9UHD9 624 aa3.83□□□□□ -1.8
SPG11-208ENST00000558155 DMRT1Q9Y5R6 373 aa3.83□□□□□ -1.8
SPG11-208ENST00000558155 FRAS1Q86XX4 4008 aa3.83□□□□□ -1.8
SPG11-208ENST00000558155 PLECQ15149 4684 aaKnown RBP3.83□□□□□ -1.8
SPG11-208ENST00000558155 TRAV8-7A0A075B6U6 113 aa3.82□□□□□ -1.8
SPG11-208ENST00000558155 TRBV6-6A0A0A6YYG2 114 aa3.82□□□□□ -1.8
SPG11-208ENST00000558155 TRBV5-5A0A0J9YX44 114 aa3.82□□□□□ -1.8
SPG11-208ENST00000558155 A0A1W2PPK0 400 aa3.82□□□□□ -1.8
SPG11-208ENST00000558155 TMEM213A2RRL7 107 aa3.82□□□□□ -1.8
SPG11-208ENST00000558155 DPPA5A6NC42 116 aa3.82□□□□□ -1.8
SPG11-208ENST00000558155 A8MWP6 167 aa3.82□□□□□ -1.8
SPG11-208ENST00000558155 NAPSAO96009 420 aa3.82□□□□□ -1.8
SPG11-208ENST00000558155 DHFRP00374 187 aa3.82□□□□□ -1.8
SPG11-208ENST00000558155 UBBP0CG47 229 aa3.82□□□□□ -1.8
SPG11-208ENST00000558155 C8orf88P0DMB2 117 aa3.82□□□□□ -1.8
SPG11-208ENST00000558155 MYOD1P15172 320 aa3.82□□□□□ -1.8
SPG11-208ENST00000558155 HIST1H1BP16401 226 aaKnown RBP3.82□□□□□ -1.8
SPG11-208ENST00000558155 CTRB1P17538 263 aa3.82□□□□□ -1.8
SPG11-208ENST00000558155 GALP22466 123 aa3.82□□□□□ -1.8
SPG11-208ENST00000558155 ADMP35318 185 aa3.82□□□□□ -1.8
SPG11-208ENST00000558155 SERPINB10P48595 397 aa3.82□□□□□ -1.8
SPG11-208ENST00000558155 MFAP2P55001 183 aa3.82□□□□□ -1.8
SPG11-208ENST00000558155 ELLP55199 621 aaPredicted RBP3.82□□□□□ -1.8
SPG11-208ENST00000558155 UBE2KP61086 200 aa3.82□□□□□ -1.8
SPG11-208ENST00000558155 MED21Q13503 144 aa3.82□□□□□ -1.8
SPG11-208ENST00000558155 YIF1BQ5BJH7 314 aa3.82□□□□□ -1.8
SPG11-208ENST00000558155 CTRB2Q6GPI1 263 aa3.82□□□□□ -1.8
SPG11-208ENST00000558155 BTNL8Q6UX41 500 aa3.82□□□□□ -1.8
SPG11-208ENST00000558155 CLEC19AQ6UXS0 136 aa3.82□□□□□ -1.8
SPG11-208ENST00000558155 ZNF600Q6ZNG1 722 aa3.82□□□□□ -1.8
SPG11-208ENST00000558155 MMD2Q8IY49 270 aa3.82□□□□□ -1.8
SPG11-208ENST00000558155 SETD9Q8NE22 299 aa3.82□□□□□ -1.8
SPG11-208ENST00000558155 OR52I1Q8NGK6 324 aa3.82□□□□□ -1.8
SPG11-208ENST00000558155 OR11H2Q8NH07 326 aa3.82□□□□□ -1.8
SPG11-208ENST00000558155 OR4A5Q8NH83 315 aa3.82□□□□□ -1.8
SPG11-208ENST00000558155 RHOXF1Q8NHV9 184 aa3.82□□□□□ -1.8
SPG11-208ENST00000558155 ACOT12Q8WYK0 555 aa3.82□□□□□ -1.8
SPG11-208ENST00000558155 SMIM19Q96E16 107 aa3.82□□□□□ -1.8
SPG11-208ENST00000558155 ADTRPQ96IZ2 230 aa3.82□□□□□ -1.8
SPG11-208ENST00000558155 SPAG8Q99932 426 aaPredicted RBP3.82□□□□□ -1.8
SPG11-208ENST00000558155 AIFM2Q9BRQ8 373 aa3.82□□□□□ -1.8
SPG11-208ENST00000558155 MRPS18AQ9NVS2 196 aaKnown RBP3.82□□□□□ -1.8
SPG11-208ENST00000558155 ZNF446Q9NWS9 450 aa3.82□□□□□ -1.8
SPG11-208ENST00000558155 RDH8Q9NYR8 311 aa3.82□□□□□ -1.8
SPG11-208ENST00000558155 OR1A1Q9P1Q5 309 aa3.82□□□□□ -1.8
SPG11-208ENST00000558155 AASSQ9UDR5 926 aa3.82□□□□□ -1.8
SPG11-208ENST00000558155 ZNF257Q9Y2Q1 563 aa3.82□□□□□ -1.8
SPG11-208ENST00000558155 UFC1Q9Y3C8 167 aa3.82□□□□□ -1.8
SPG11-208ENST00000558155 PCLOQ9Y6V0 5065 aa3.82□□□□□ -1.8
SPG11-208ENST00000558155 TRBV5-7A0A0A0MS05 114 aa3.81□□□□□ -1.8
SPG11-208ENST00000558155 TRBV7-1A0A0A6YYK4 115 aa3.81□□□□□ -1.8
SPG11-208ENST00000558155 OR4C46A6NHA9 309 aa3.81□□□□□ -1.8
SPG11-208ENST00000558155 SAC3D1A6NKF1 404 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms