RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 BAALCQ8WXS3 180 aa3.96□□□□□ -1.78
RTF1-204ENST00000558117 TMEM106AQ96A25 262 aa3.96□□□□□ -1.78
RTF1-204ENST00000558117 ZNF414Q96IQ9 312 aa3.96□□□□□ -1.78
RTF1-204ENST00000558117 SEC22AQ96IW7 307 aa3.96□□□□□ -1.78
RTF1-204ENST00000558117 SLC35G5Q96KT7 338 aa3.96□□□□□ -1.78
RTF1-204ENST00000558117 NOL4LQ96MY1 436 aaPredicted RBP3.96□□□□□ -1.78
RTF1-204ENST00000558117 OR8B4Q96RC9 309 aa3.96□□□□□ -1.78
RTF1-204ENST00000558117 UQCC2Q9BRT2 126 aa3.96□□□□□ -1.78
RTF1-204ENST00000558117 NAA50Q9GZZ1 169 aaKnown RBP3.96□□□□□ -1.78
RTF1-204ENST00000558117 SYT4Q9H2B2 425 aa3.96□□□□□ -1.78
RTF1-204ENST00000558117 OR51I1Q9H343 314 aa3.96□□□□□ -1.78
RTF1-204ENST00000558117 CCDC59Q9P031 241 aaKnown RBP3.96□□□□□ -1.78
RTF1-204ENST00000558117 CBY1Q9Y3M2 126 aa3.96□□□□□ -1.78
RTF1-204ENST00000558117 AP4S1Q9Y587 144 aa3.96□□□□□ -1.78
RTF1-204ENST00000558117 PUS1Q9Y606 427 aaKnown RBP eCLIP3.96□□□□□ -1.78
RTF1-204ENST00000558117 KIF25-AS1Q9Y6Z4 181 aa3.96□□□□□ -1.78
RTF1-204ENST00000558117 IGHV3OR16-12A0A075B7B8 117 aa3.95□□□□□ -1.78
RTF1-204ENST00000558117 DHRS12A0PJE2 317 aa3.95□□□□□ -1.78
RTF1-204ENST00000558117 C5orf49A4QMS7 147 aa3.95□□□□□ -1.78
RTF1-204ENST00000558117 ZNF705EA8MWA4 302 aaPredicted RBP3.95□□□□□ -1.78
RTF1-204ENST00000558117 FAM220BPB1ANY3 271 aa3.95□□□□□ -1.78
RTF1-204ENST00000558117 C5orf58C9J3I9 102 aa3.95□□□□□ -1.78
RTF1-204ENST00000558117 FTCDNL1E5RQL4 147 aa3.95□□□□□ -1.78
RTF1-204ENST00000558117 F5H5P2 479 aa3.95□□□□□ -1.78
RTF1-204ENST00000558117 DCTN6O00399 190 aa3.95□□□□□ -1.78
RTF1-204ENST00000558117 HMGN4O00479 90 aa3.95□□□□□ -1.78
RTF1-204ENST00000558117 OVOL1O14753 267 aa3.95□□□□□ -1.78
RTF1-204ENST00000558117 MRPS12O15235 138 aaKnown RBP3.95□□□□□ -1.78
RTF1-204ENST00000558117 XRCC2O43543 280 aa3.95□□□□□ -1.78
RTF1-204ENST00000558117 SC5DO75845 299 aa3.95□□□□□ -1.78
RTF1-204ENST00000558117 OXTP01178 125 aa3.95□□□□□ -1.78
RTF1-204ENST00000558117 BCHEP06276 602 aa3.95□□□□□ -1.78
RTF1-204ENST00000558117 TFPTP0C1Z6 253 aa3.95□□□□□ -1.78
RTF1-204ENST00000558117 GPX2P18283 190 aa3.95□□□□□ -1.78
RTF1-204ENST00000558117 KDELR2P33947 212 aa3.95□□□□□ -1.78
RTF1-204ENST00000558117 GSSP48637 474 aa3.95□□□□□ -1.78
RTF1-204ENST00000558117 IDH2P48735 452 aaKnown RBP3.95□□□□□ -1.78
RTF1-204ENST00000558117 ARHGDIBP52566 201 aa3.95□□□□□ -1.78
RTF1-204ENST00000558117 UBE2G2P60604 165 aa3.95□□□□□ -1.78
RTF1-204ENST00000558117 DSTNP60981 165 aa3.95□□□□□ -1.78
RTF1-204ENST00000558117 CDK6Q00534 326 aa3.95□□□□□ -1.78
RTF1-204ENST00000558117 BNIP2Q12982 314 aa3.95□□□□□ -1.78
RTF1-204ENST00000558117 TRAM2Q15035 370 aa3.95□□□□□ -1.78
RTF1-204ENST00000558117 ZNF141Q15928 474 aa3.95□□□□□ -1.78
RTF1-204ENST00000558117 PAN3Q58A45 887 aaKnown RBP3.95□□□□□ -1.78
RTF1-204ENST00000558117 ZNF691Q5VV52 312 aa3.95□□□□□ -1.78
RTF1-204ENST00000558117 DPPA2Q7Z7J5 298 aa3.95□□□□□ -1.78
RTF1-204ENST00000558117 LYG2Q86SG7 212 aa3.95□□□□□ -1.78
RTF1-204ENST00000558117 DRAM1Q8N682 238 aa3.95□□□□□ -1.78
RTF1-204ENST00000558117 NOXO1Q8NFA2 376 aa3.95□□□□□ -1.78
RTF1-204ENST00000558117 LGALS14Q8TCE9 139 aa3.95□□□□□ -1.78
RTF1-204ENST00000558117 TMEM239Q8WW34 195 aa3.95□□□□□ -1.78
RTF1-204ENST00000558117 DCUN1D4Q92564 292 aa3.95□□□□□ -1.78
RTF1-204ENST00000558117 RPEQ96AT9 228 aa3.95□□□□□ -1.78
RTF1-204ENST00000558117 CMBLQ96DG6 245 aa3.95□□□□□ -1.78
RTF1-204ENST00000558117 OR7D2Q96RA2 312 aa3.95□□□□□ -1.78
RTF1-204ENST00000558117 STACQ99469 402 aa3.95□□□□□ -1.78
RTF1-204ENST00000558117 EMC6Q9BV81 110 aa3.95□□□□□ -1.78
RTF1-204ENST00000558117 TAPBPLQ9BX59 468 aa3.95□□□□□ -1.78
RTF1-204ENST00000558117 HCAR1Q9BXC0 346 aa3.95□□□□□ -1.78
RTF1-204ENST00000558117 ULBP2Q9BZM5 246 aa3.95□□□□□ -1.78
RTF1-204ENST00000558117 TMEM38BQ9NVV0 291 aa3.95□□□□□ -1.78
RTF1-204ENST00000558117 TRAV38-1A0A0B4J264 116 aa3.94□□□□□ -1.78
RTF1-204ENST00000558117 LOC102725191A0A1B0GVB3 256 aa3.94□□□□□ -1.78
RTF1-204ENST00000558117 TCRBV3S1A0A5B6 114 aa3.94□□□□□ -1.78
RTF1-204ENST00000558117 LGALS9O00182 355 aa3.94□□□□□ -1.78
RTF1-204ENST00000558117 NPIPB7O75200 414 aa3.94□□□□□ -1.78
RTF1-204ENST00000558117 FKBP6O75344 327 aa3.94□□□□□ -1.78
RTF1-204ENST00000558117 CNIH1O95406 144 aa3.94□□□□□ -1.78
RTF1-204ENST00000558117 OR8U8P0C7N1 319 aa3.94□□□□□ -1.78
RTF1-204ENST00000558117 PPIBP23284 216 aaKnown RBP3.94□□□□□ -1.78
RTF1-204ENST00000558117 S100A5P33763 92 aa3.94□□□□□ -1.78
RTF1-204ENST00000558117 KIR3DL2P43630 455 aa3.94□□□□□ -1.78
RTF1-204ENST00000558117 OR1E2P47887 323 aa3.94□□□□□ -1.78
RTF1-204ENST00000558117 ALDH3B2P48448 385 aa3.94□□□□□ -1.78
RTF1-204ENST00000558117 CSNK1A1P48729 337 aa3.94□□□□□ -1.78
RTF1-204ENST00000558117 BLVRAP53004 296 aa3.94□□□□□ -1.78
RTF1-204ENST00000558117 HOXC5Q00444 222 aa3.94□□□□□ -1.78
RTF1-204ENST00000558117 FUT5Q11128 374 aa3.94□□□□□ -1.78
RTF1-204ENST00000558117 C1DQ13901 141 aaKnown RBP3.94□□□□□ -1.78
RTF1-204ENST00000558117 OR8B8Q15620 311 aa3.94□□□□□ -1.78
RTF1-204ENST00000558117 MPPED2Q15777 294 aa3.94□□□□□ -1.78
RTF1-204ENST00000558117 MAPK14Q16539 360 aa3.94□□□□□ -1.78
RTF1-204ENST00000558117 SLC36A2Q495M3 483 aa3.94□□□□□ -1.78
RTF1-204ENST00000558117 PABPC1L2AQ5JQF8 200 aa3.94□□□□□ -1.78
RTF1-204ENST00000558117 LCN8Q6JVE9 175 aa3.94□□□□□ -1.78
RTF1-204ENST00000558117 OR4K5Q8NGD3 323 aa3.94□□□□□ -1.78
RTF1-204ENST00000558117 OR11L1Q8NGX0 322 aa3.94□□□□□ -1.78
RTF1-204ENST00000558117 OR5B3Q8NH48 314 aa3.94□□□□□ -1.78
RTF1-204ENST00000558117 C4orf3Q8WVX3 66 aa3.94□□□□□ -1.78
RTF1-204ENST00000558117 TAMM41Q96BW9 452 aa3.94□□□□□ -1.78
RTF1-204ENST00000558117 MALSU1Q96EH3 234 aa3.94□□□□□ -1.78
RTF1-204ENST00000558117 PYURFQ96I23 114 aa3.94□□□□□ -1.78
RTF1-204ENST00000558117 WFDC6Q9BQY6 131 aa3.94□□□□□ -1.78
RTF1-204ENST00000558117 URGCP-MRPS24S4R325 110 aa3.94□□□□□ -1.78
RTF1-204ENST00000558117 CLDN24A6NM45 220 aa3.93□□□□□ -1.78
RTF1-204ENST00000558117 E9PLD3 99 aa3.93□□□□□ -1.78
RTF1-204ENST00000558117 LOC110117498-PIK3R3F6TDL0 507 aa3.93□□□□□ -1.78
RTF1-204ENST00000558117 GNGT2O14610 69 aa3.93□□□□□ -1.78
RTF1-204ENST00000558117 GPX5O75715 221 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 214.9 ms