RNA–Protein interactions for RNA: ENST00000558036.5

SNRPA1-205, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,108 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-205ENST00000558036 PSMG3-AS1Q96PY0 264 aa16.54■□□□□ 0.24
SNRPA1-205ENST00000558036 PCGF1Q9BSM1 259 aa16.54■□□□□ 0.24
SNRPA1-205ENST00000558036 ZNF471Q9BX82 626 aaPredicted RBP16.54■□□□□ 0.24
SNRPA1-205ENST00000558036 SMIM3Q9BZL3 60 aa16.54■□□□□ 0.24
SNRPA1-205ENST00000558036 GSX2Q9BZM3 304 aa16.54■□□□□ 0.24
SNRPA1-205ENST00000558036 COA4Q9NYJ1 87 aa16.54■□□□□ 0.24
SNRPA1-205ENST00000558036 PAX6P26367 422 aa16.54■□□□□ 0.24
SNRPA1-205ENST00000558036 IL3RAP26951 378 aa16.54■□□□□ 0.24
SNRPA1-205ENST00000558036 PAX9P55771 341 aa16.54■□□□□ 0.24
SNRPA1-205ENST00000558036 ARPC5LQ9BPX5 153 aa16.54■□□□□ 0.24
SNRPA1-205ENST00000558036 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.54■□□□□ 0.24
SNRPA1-205ENST00000558036 SYNGR2O43760 224 aa16.53■□□□□ 0.24
SNRPA1-205ENST00000558036 APOA2P02652 100 aa16.53■□□□□ 0.24
SNRPA1-205ENST00000558036 PVALBP20472 110 aaPredicted RBP16.53■□□□□ 0.24
SNRPA1-205ENST00000558036 P2RY1P47900 373 aa16.53■□□□□ 0.24
SNRPA1-205ENST00000558036 VAMP2P63027 116 aa16.53■□□□□ 0.24
SNRPA1-205ENST00000558036 NHLH2Q02577 135 aa16.53■□□□□ 0.24
SNRPA1-205ENST00000558036 TNFRSF9Q07011 255 aa16.53■□□□□ 0.24
SNRPA1-205ENST00000558036 EXOSC2Q13868 293 aaKnown RBP16.53■□□□□ 0.24
SNRPA1-205ENST00000558036 OR4A47Q6IF82 309 aa16.53■□□□□ 0.24
SNRPA1-205ENST00000558036 FAM71F2Q6NXP2 309 aa16.53■□□□□ 0.24
SNRPA1-205ENST00000558036 QTRT1Q9BXR0 403 aaKnown RBP16.53■□□□□ 0.24
SNRPA1-205ENST00000558036 PAX1P15863 534 aa16.52■□□□□ 0.24
SNRPA1-205ENST00000558036 OR2C3Q8N628 320 aa16.52■□□□□ 0.24
SNRPA1-205ENST00000558036 IGSF23A1L1A6 192 aa16.52■□□□□ 0.23
SNRPA1-205ENST00000558036 UBE2KP61086 200 aa16.52■□□□□ 0.23
SNRPA1-205ENST00000558036 SLC51BQ86UW2 128 aa16.52■□□□□ 0.23
SNRPA1-205ENST00000558036 KIR3DL3Q8N743 410 aa16.52■□□□□ 0.23
SNRPA1-205ENST00000558036 OR11H6Q8NGC7 330 aa16.52■□□□□ 0.23
SNRPA1-205ENST00000558036 ZDHHC16Q969W1 377 aa16.52■□□□□ 0.23
SNRPA1-205ENST00000558036 SIRPDQ9H106 197 aa16.52■□□□□ 0.23
SNRPA1-205ENST00000558036 RBKSQ9H477 322 aa16.52■□□□□ 0.23
SNRPA1-205ENST00000558036 HSPB7Q9UBY9 170 aa16.52■□□□□ 0.23
SNRPA1-205ENST00000558036 PAIP2BQ9ULR5 123 aaKnown RBP16.52■□□□□ 0.23
SNRPA1-205ENST00000558036 KPTNQ9Y664 436 aa16.52■□□□□ 0.23
SNRPA1-205ENST00000558036 NAV2Q8IVL1 2488 aa16.52■□□□□ 0.23
SNRPA1-205ENST00000558036 RNASEK-C17orf49H0YIS7 233 aa16.51■□□□□ 0.23
SNRPA1-205ENST00000558036 SHOXO15266 292 aa16.51■□□□□ 0.23
SNRPA1-205ENST00000558036 FOXH1O75593 365 aa16.51■□□□□ 0.23
SNRPA1-205ENST00000558036 CLEC12BQ2HXU8 276 aa16.51■□□□□ 0.23
SNRPA1-205ENST00000558036 ALKAL2Q6UX46 152 aa16.51■□□□□ 0.23
SNRPA1-205ENST00000558036 LHFPL4Q7Z7J7 247 aa16.51■□□□□ 0.23
SNRPA1-205ENST00000558036 RITA1Q96K30 269 aa16.51■□□□□ 0.23
SNRPA1-205ENST00000558036 CYTL1Q9NRR1 136 aa16.51■□□□□ 0.23
SNRPA1-205ENST00000558036 LYRM2Q9NU23 88 aaPredicted RBP16.51■□□□□ 0.23
SNRPA1-205ENST00000558036 FBXL17Q9UF56 701 aa16.51■□□□□ 0.23
SNRPA1-205ENST00000558036 WNK2Q9Y3S1 2297 aa16.51■□□□□ 0.23
SNRPA1-205ENST00000558036 ABCA2Q9BZC7 2435 aa16.51■□□□□ 0.23
SNRPA1-205ENST00000558036 RELBQ01201 579 aa16.51■□□□□ 0.23
SNRPA1-205ENST00000558036 C1orf122Q6ZSJ8 110 aa16.51■□□□□ 0.23
SNRPA1-205ENST00000558036 OR4A16Q8NH70 328 aa16.51■□□□□ 0.23
SNRPA1-205ENST00000558036 PCNPQ8WW12 178 aaKnown RBP16.51■□□□□ 0.23
SNRPA1-205ENST00000558036 RPEQ96AT9 228 aa16.51■□□□□ 0.23
SNRPA1-205ENST00000558036 HARBI1Q96MB7 349 aa16.51■□□□□ 0.23
SNRPA1-205ENST00000558036 HILPDAQ9Y5L2 63 aa16.51■□□□□ 0.23
SNRPA1-205ENST00000558036 GPR137BO60478 399 aa16.5■□□□□ 0.23
SNRPA1-205ENST00000558036 TOX4O94842 621 aa16.5■□□□□ 0.23
SNRPA1-205ENST00000558036 HOXB4P17483 251 aaPredicted RBP16.5■□□□□ 0.23
SNRPA1-205ENST00000558036 EWSR1Q01844 656 aaKnown RBP eCLIP16.5■□□□□ 0.23
SNRPA1-205ENST00000558036 DHRS7BQ6IAN0 325 aaPredicted RBP16.5■□□□□ 0.23
SNRPA1-205ENST00000558036 ST8SIA2Q92186 375 aa16.5■□□□□ 0.23
SNRPA1-205ENST00000558036 LHX4Q969G2 390 aa16.5■□□□□ 0.23
SNRPA1-205ENST00000558036 FLYWCH2Q96CP2 140 aaKnown RBP16.5■□□□□ 0.23
SNRPA1-205ENST00000558036 INSIG2Q9Y5U4 225 aa16.5■□□□□ 0.23
SNRPA1-205ENST00000558036 IGHV1-3A0A0C4DH29 117 aa16.49■□□□□ 0.23
SNRPA1-205ENST00000558036 LY6LH3BQJ8 138 aa16.49■□□□□ 0.23
SNRPA1-205ENST00000558036 CST7O76096 145 aa16.49■□□□□ 0.23
SNRPA1-205ENST00000558036 HRASP01112 189 aa16.49■□□□□ 0.23
SNRPA1-205ENST00000558036 MMP9P14780 707 aa16.49■□□□□ 0.23
SNRPA1-205ENST00000558036 MYOD1P15172 320 aa16.49■□□□□ 0.23
SNRPA1-205ENST00000558036 MOB3BQ86TA1 216 aa16.49■□□□□ 0.23
SNRPA1-205ENST00000558036 TMEM252Q8N6L7 170 aa16.49■□□□□ 0.23
SNRPA1-205ENST00000558036 WASHC3Q9Y3C0 194 aa16.49■□□□□ 0.23
SNRPA1-205ENST00000558036 AMMECR1Q9Y4X0 333 aaPredicted RBP16.49■□□□□ 0.23
SNRPA1-205ENST00000558036 ODF3BA8MYP8 253 aa16.49■□□□□ 0.23
SNRPA1-205ENST00000558036 HTR1DP28221 377 aa16.49■□□□□ 0.23
SNRPA1-205ENST00000558036 DVL1P1P54792 670 aaPredicted RBP16.49■□□□□ 0.23
SNRPA1-205ENST00000558036 RAB40CQ96S21 281 aa16.49■□□□□ 0.23
SNRPA1-205ENST00000558036 TBX15Q96SF7 602 aa16.49■□□□□ 0.23
SNRPA1-205ENST00000558036 FAM90A26D6RGX4 464 aa16.48■□□□□ 0.23
SNRPA1-205ENST00000558036 IFNA17P01571 189 aa16.48■□□□□ 0.23
SNRPA1-205ENST00000558036 GAPDHP04406 335 aaKnown RBP16.48■□□□□ 0.23
SNRPA1-205ENST00000558036 SAA1P0DJI8 122 aaPredicted RBP16.48■□□□□ 0.23
SNRPA1-205ENST00000558036 TMEM267Q0VDI3 215 aaPredicted RBP16.48■□□□□ 0.23
SNRPA1-205ENST00000558036 GPR157Q5UAW9 335 aa16.48■□□□□ 0.23
SNRPA1-205ENST00000558036 RPL7L1Q6DKI1 246 aaKnown RBP16.48■□□□□ 0.23
SNRPA1-205ENST00000558036 ZNF767PQ75MW2 155 aa16.48■□□□□ 0.23
SNRPA1-205ENST00000558036 PDPNQ86YL7 162 aa16.48■□□□□ 0.23
SNRPA1-205ENST00000558036 TMEM217Q8N7C4 229 aa16.48■□□□□ 0.23
SNRPA1-205ENST00000558036 UNKLQ9H9P5 680 aaKnown RBP16.48■□□□□ 0.23
SNRPA1-205ENST00000558036 ZFHX3Q15911 3703 aa16.48■□□□□ 0.23
SNRPA1-205ENST00000558036 RRASP10301 218 aa16.48■□□□□ 0.23
SNRPA1-205ENST00000558036 RPS16P62249 146 aaKnown RBP16.48■□□□□ 0.23
SNRPA1-205ENST00000558036 OR8H3Q8N146 312 aa16.48■□□□□ 0.23
SNRPA1-205ENST00000558036 OR4C13Q8NGP0 309 aa16.48■□□□□ 0.23
SNRPA1-205ENST00000558036 OSR1Q8TAX0 266 aaPredicted RBP16.48■□□□□ 0.23
SNRPA1-205ENST00000558036 C17orf50Q8WW18 174 aa16.48■□□□□ 0.23
SNRPA1-205ENST00000558036 PSENENQ9NZ42 101 aa16.48■□□□□ 0.23
SNRPA1-205ENST00000558036 WSB1Q9Y6I7 421 aa16.48■□□□□ 0.23
SNRPA1-205ENST00000558036 IFNA7P01567 189 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms