RNA–Protein interactions for RNA: ENST00000557948.1

TRPM1-204, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 2

Gene TRPM1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-204ENST00000557948 PRICKLE4Q2TBC4 344 aa4.82□□□□□ -1.64
TRPM1-204ENST00000557948 ZNF260Q3ZCT1 412 aa4.82□□□□□ -1.64
TRPM1-204ENST00000557948 MARCH3Q86UD3 253 aa4.82□□□□□ -1.64
TRPM1-204ENST00000557948 COMMD2Q86X83 199 aa4.82□□□□□ -1.64
TRPM1-204ENST00000557948 C1orf174Q8IYL3 243 aa4.82□□□□□ -1.64
TRPM1-204ENST00000557948 LYG1Q8N1E2 194 aa4.82□□□□□ -1.64
TRPM1-204ENST00000557948 OR10S1Q8NGN2 331 aa4.82□□□□□ -1.64
TRPM1-204ENST00000557948 CASTOR1Q8WTX7 329 aa4.82□□□□□ -1.64
TRPM1-204ENST00000557948 CFHR4Q92496 578 aa4.82□□□□□ -1.64
TRPM1-204ENST00000557948 RAB1CQ92928 201 aa4.82□□□□□ -1.64
TRPM1-204ENST00000557948 EMG1Q92979 244 aaKnown RBP4.82□□□□□ -1.64
TRPM1-204ENST00000557948 FAM46BQ96A09 425 aa4.82□□□□□ -1.64
TRPM1-204ENST00000557948 GNPNAT1Q96EK6 184 aaPredicted RBP4.82□□□□□ -1.64
TRPM1-204ENST00000557948 NUDT11Q96G61 164 aa4.82□□□□□ -1.64
TRPM1-204ENST00000557948 ABHD14BQ96IU4 210 aa4.82□□□□□ -1.64
TRPM1-204ENST00000557948 ALKBH3Q96Q83 286 aaPredicted RBP4.82□□□□□ -1.64
TRPM1-204ENST00000557948 OR7D2Q96RA2 312 aa4.82□□□□□ -1.64
TRPM1-204ENST00000557948 AGMATQ9BSE5 352 aa4.82□□□□□ -1.64
TRPM1-204ENST00000557948 RTN4RQ9BZR6 473 aa4.82□□□□□ -1.64
TRPM1-204ENST00000557948 GLIPR2Q9H4G4 154 aa4.82□□□□□ -1.64
TRPM1-204ENST00000557948 Q9N2K0 584 aa4.82□□□□□ -1.64
TRPM1-204ENST00000557948 SLC7A10Q9NS82 523 aa4.82□□□□□ -1.64
TRPM1-204ENST00000557948 SLC45A2Q9UMX9 530 aa4.82□□□□□ -1.64
TRPM1-204ENST00000557948 WIPI2Q9Y4P8 454 aa4.82□□□□□ -1.64
TRPM1-204ENST00000557948 INSIG2Q9Y5U4 225 aa4.82□□□□□ -1.64
TRPM1-204ENST00000557948 UBR4Q5T4S7 5183 aa4.82□□□□□ -1.64
TRPM1-204ENST00000557948 IGLV3-32A0A0A0MS00 114 aa4.81□□□□□ -1.64
TRPM1-204ENST00000557948 MAP1LC3B2A6NCE7 125 aa4.81□□□□□ -1.64
TRPM1-204ENST00000557948 CBY3A6NI87 242 aa4.81□□□□□ -1.64
TRPM1-204ENST00000557948 TRAPPC2LH3BP13 241 aa4.81□□□□□ -1.64
TRPM1-204ENST00000557948 PLPP1O14494 284 aa4.81□□□□□ -1.64
TRPM1-204ENST00000557948 GEMIN2O14893 280 aaKnown RBP4.81□□□□□ -1.64
TRPM1-204ENST00000557948 TUSC2O75896 110 aa4.81□□□□□ -1.64
TRPM1-204ENST00000557948 SCGB1D1O95968 90 aa4.81□□□□□ -1.64
TRPM1-204ENST00000557948 IGHMP01871 453 aa4.81□□□□□ -1.64
TRPM1-204ENST00000557948 PLA2G1BP04054 148 aaKnown RBP4.81□□□□□ -1.64
TRPM1-204ENST00000557948 MAS1P04201 325 aa4.81□□□□□ -1.64
TRPM1-204ENST00000557948 HMGN2P05204 90 aaKnown RBP4.81□□□□□ -1.64
TRPM1-204ENST00000557948 PFN1P07737 140 aaKnown RBP4.81□□□□□ -1.64
TRPM1-204ENST00000557948 CTXN2P0C2S0 81 aa4.81□□□□□ -1.64
TRPM1-204ENST00000557948 CECR9P0C854 216 aa4.81□□□□□ -1.64
TRPM1-204ENST00000557948 PPIAL4GP0DN37 164 aa4.81□□□□□ -1.64
TRPM1-204ENST00000557948 ESDP10768 282 aa4.81□□□□□ -1.64
TRPM1-204ENST00000557948 AKR1C4P17516 323 aa4.81□□□□□ -1.64
TRPM1-204ENST00000557948 IGFBP3P17936 291 aaPredicted RBP4.81□□□□□ -1.64
TRPM1-204ENST00000557948 ALDH3B1P43353 468 aa4.81□□□□□ -1.64
TRPM1-204ENST00000557948 EFNB2P52799 333 aa4.81□□□□□ -1.64
TRPM1-204ENST00000557948 NANOS3P60323 173 aaKnown RBP4.81□□□□□ -1.64
TRPM1-204ENST00000557948 RND3P61587 244 aa4.81□□□□□ -1.64
TRPM1-204ENST00000557948 RAB11AP62491 216 aa4.81□□□□□ -1.64
TRPM1-204ENST00000557948 MFGE8Q08431 387 aaPredicted RBP4.81□□□□□ -1.64
TRPM1-204ENST00000557948 FOXF1Q12946 379 aa4.81□□□□□ -1.64
TRPM1-204ENST00000557948 ARL6IP1Q15041 203 aa4.81□□□□□ -1.64
TRPM1-204ENST00000557948 PSG3Q16557 428 aa4.81□□□□□ -1.64
TRPM1-204ENST00000557948 PRSS8Q16651 343 aa4.81□□□□□ -1.64
TRPM1-204ENST00000557948 PLPPR5Q32ZL2 321 aa4.81□□□□□ -1.64
TRPM1-204ENST00000557948 ARHGAP11BQ3KRB8 267 aa4.81□□□□□ -1.64
TRPM1-204ENST00000557948 ACTL10Q5JWF8 245 aa4.81□□□□□ -1.64
TRPM1-204ENST00000557948 AADACL3Q5VUY0 350 aa4.81□□□□□ -1.64
TRPM1-204ENST00000557948 TMEM200BQ69YZ2 307 aa4.81□□□□□ -1.64
TRPM1-204ENST00000557948 ETFRF1Q6IPR1 90 aa4.81□□□□□ -1.64
TRPM1-204ENST00000557948 ZNF343Q6P1L6 599 aa4.81□□□□□ -1.64
TRPM1-204ENST00000557948 BRD3OSQ6XYD6 125 aa4.81□□□□□ -1.64
TRPM1-204ENST00000557948 ZNF627Q7L945 461 aa4.81□□□□□ -1.64
TRPM1-204ENST00000557948 PNKDQ8N490 385 aa4.81□□□□□ -1.64
TRPM1-204ENST00000557948 ZNF676Q8N7Q3 588 aa4.81□□□□□ -1.64
TRPM1-204ENST00000557948 OR51L1Q8NGJ5 315 aa4.81□□□□□ -1.64
TRPM1-204ENST00000557948 OR5B3Q8NH48 314 aa4.81□□□□□ -1.64
TRPM1-204ENST00000557948 GPR119Q8TDV5 335 aa4.81□□□□□ -1.64
TRPM1-204ENST00000557948 SLC25A43Q8WUT9 341 aaPredicted RBP4.81□□□□□ -1.64
TRPM1-204ENST00000557948 MRGPRFQ96AM1 343 aa4.81□□□□□ -1.64
TRPM1-204ENST00000557948 RASD2Q96D21 266 aa4.81□□□□□ -1.64
TRPM1-204ENST00000557948 ASCL2Q99929 193 aa4.81□□□□□ -1.64
TRPM1-204ENST00000557948 MAP1LC3BQ9GZQ8 125 aa4.81□□□□□ -1.64
TRPM1-204ENST00000557948 GCM1Q9NP62 436 aa4.81□□□□□ -1.64
TRPM1-204ENST00000557948 OBP2BQ9NPH6 170 aa4.81□□□□□ -1.64
TRPM1-204ENST00000557948 GPR84Q9NQS5 396 aa4.81□□□□□ -1.64
TRPM1-204ENST00000557948 FLRT3Q9NZU0 649 aa4.81□□□□□ -1.64
TRPM1-204ENST00000557948 B3GAT1Q9P2W7 334 aa4.81□□□□□ -1.64
TRPM1-204ENST00000557948 UQCR10Q9UDW1 63 aa4.81□□□□□ -1.64
TRPM1-204ENST00000557948 RNF150Q9ULK6 438 aa4.81□□□□□ -1.64
TRPM1-204ENST00000557948 RPH3ALQ9UNE2 315 aa4.81□□□□□ -1.64
TRPM1-204ENST00000557948 TRAV8-7A0A075B6U6 113 aa4.8□□□□□ -1.64
TRPM1-204ENST00000557948 ZNF727A8MUV8 499 aa4.8□□□□□ -1.64
TRPM1-204ENST00000557948 ZNF732B4DXR9 585 aa4.8□□□□□ -1.64
TRPM1-204ENST00000557948 CCL25O15444 150 aa4.8□□□□□ -1.64
TRPM1-204ENST00000557948 ANGPTL7O43827 346 aa4.8□□□□□ -1.64
TRPM1-204ENST00000557948 FCMRO60667 390 aa4.8□□□□□ -1.64
TRPM1-204ENST00000557948 MRPL33O75394 65 aaKnown RBP4.8□□□□□ -1.64
TRPM1-204ENST00000557948 ZNF43P17038 809 aa4.8□□□□□ -1.64
TRPM1-204ENST00000557948 CSNK2A2P19784 350 aaPredicted RBP4.8□□□□□ -1.64
TRPM1-204ENST00000557948 HSD11B1P28845 292 aa4.8□□□□□ -1.64
TRPM1-204ENST00000557948 GNRHRP30968 328 aa4.8□□□□□ -1.64
TRPM1-204ENST00000557948 PSMB10P40306 273 aa4.8□□□□□ -1.64
TRPM1-204ENST00000557948 APOBEC1P41238 236 aaKnown RBP4.8□□□□□ -1.64
TRPM1-204ENST00000557948 CNN1P51911 297 aaKnown RBP4.8□□□□□ -1.64
TRPM1-204ENST00000557948 NCBP2P52298 156 aaKnown RBP eCLIP4.8□□□□□ -1.64
TRPM1-204ENST00000557948 TAS2R46P59540 309 aa4.8□□□□□ -1.64
TRPM1-204ENST00000557948 RAC3P60763 192 aa4.8□□□□□ -1.64
TRPM1-204ENST00000557948 S100A10P60903 97 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 138.5 ms