RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 ICOSQ9Y6W8 199 aa2.41□□□□□ -2.02
TDP1-217ENST00000557782 TMEM56-RWDD3S4R434 201 aa2.41□□□□□ -2.02
TDP1-217ENST00000557782 ATG2BQ96BY7 2078 aa2.41□□□□□ -2.02
TDP1-217ENST00000557782 SCN10AQ9Y5Y9 1956 aa2.41□□□□□ -2.02
TDP1-217ENST00000557782 RALGAPA2Q2PPJ7 1873 aa2.41□□□□□ -2.02
TDP1-217ENST00000557782 TRAPPC13A5PLN9 417 aa2.4□□□□□ -2.03
TDP1-217ENST00000557782 C9JCJ5 164 aa2.4□□□□□ -2.03
TDP1-217ENST00000557782 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.4□□□□□ -2.03
TDP1-217ENST00000557782 LST1O00453 97 aa2.4□□□□□ -2.03
TDP1-217ENST00000557782 UBE2L6O14933 153 aa2.4□□□□□ -2.03
TDP1-217ENST00000557782 SLC25A20O43772 301 aa2.4□□□□□ -2.03
TDP1-217ENST00000557782 PFDN1O60925 122 aa2.4□□□□□ -2.03
TDP1-217ENST00000557782 IGKV1D-33P01593 117 aa2.4□□□□□ -2.03
TDP1-217ENST00000557782 IGKV1-33P01594 117 aa2.4□□□□□ -2.03
TDP1-217ENST00000557782 C8GP07360 202 aa2.4□□□□□ -2.03
TDP1-217ENST00000557782 RBP1P09455 135 aa2.4□□□□□ -2.03
TDP1-217ENST00000557782 ZNF705DP0CH99 300 aaPredicted RBP2.4□□□□□ -2.03
TDP1-217ENST00000557782 MUC1P15941 1255 aaPredicted RBP2.4□□□□□ -2.03
TDP1-217ENST00000557782 CRABP1P29762 137 aa2.4□□□□□ -2.03
TDP1-217ENST00000557782 PHBP35232 272 aa2.4□□□□□ -2.03
TDP1-217ENST00000557782 DEFA1P59665 94 aa2.4□□□□□ -2.03
TDP1-217ENST00000557782 S100A12P80511 92 aa2.4□□□□□ -2.03
TDP1-217ENST00000557782 ZNF616Q08AN1 781 aa2.4□□□□□ -2.03
TDP1-217ENST00000557782 OR8G1Q15617 311 aa2.4□□□□□ -2.03
TDP1-217ENST00000557782 CST6Q15828 149 aa2.4□□□□□ -2.03
TDP1-217ENST00000557782 TNFAIP8L3Q5GJ75 292 aa2.4□□□□□ -2.03
TDP1-217ENST00000557782 IBA57Q5T440 356 aaKnown RBP2.4□□□□□ -2.03
TDP1-217ENST00000557782 C9orf64Q5T6V5 341 aa2.4□□□□□ -2.03
TDP1-217ENST00000557782 LYZL2Q7Z4W2 148 aa2.4□□□□□ -2.03
TDP1-217ENST00000557782 ZFAND2AQ8N6M9 145 aa2.4□□□□□ -2.03
TDP1-217ENST00000557782 ZNF439Q8NDP4 499 aa2.4□□□□□ -2.03
TDP1-217ENST00000557782 SGMS2Q8NHU3 365 aa2.4□□□□□ -2.03
TDP1-217ENST00000557782 PARVBQ9HBI1 364 aa2.4□□□□□ -2.03
TDP1-217ENST00000557782 SLC23A2Q9UGH3 650 aa2.4□□□□□ -2.03
TDP1-217ENST00000557782 NDUFAF1Q9Y375 327 aa2.4□□□□□ -2.03
TDP1-217ENST00000557782 RPRD2Q5VT52 1461 aaKnown RBP2.39□□□□□ -2.03
TDP1-217ENST00000557782 NACAE9PAV3 2078 aa2.39□□□□□ -2.03
TDP1-217ENST00000557782 TRBV20OR9-2A0A075B6H5 130 aa2.39□□□□□ -2.03
TDP1-217ENST00000557782 IGLV3-16A0A075B6K0 115 aa2.39□□□□□ -2.03
TDP1-217ENST00000557782 KRTAP4-8A0A0G2JLE6 195 aa2.39□□□□□ -2.03
TDP1-217ENST00000557782 A0A1W2PQ67 120 aa2.39□□□□□ -2.03
TDP1-217ENST00000557782 FUOMA2VDF0 154 aa2.39□□□□□ -2.03
TDP1-217ENST00000557782 A8MUN3 132 aa2.39□□□□□ -2.03
TDP1-217ENST00000557782 H3BMM0 161 aa2.39□□□□□ -2.03
TDP1-217ENST00000557782 NDUFC2O95298 119 aa2.39□□□□□ -2.03
TDP1-217ENST00000557782 SRP19P09132 144 aaKnown RBP2.39□□□□□ -2.03
TDP1-217ENST00000557782 IGHV3-30-3P0DP02 117 aa2.39□□□□□ -2.03
TDP1-217ENST00000557782 PPIBP23284 216 aaKnown RBP2.39□□□□□ -2.03
TDP1-217ENST00000557782 TBPL1P62380 186 aa2.39□□□□□ -2.03
TDP1-217ENST00000557782 FKBP1AP62942 108 aaKnown RBP2.39□□□□□ -2.03
TDP1-217ENST00000557782 C12orf74Q32Q52 190 aa2.39□□□□□ -2.03
TDP1-217ENST00000557782 MRPL51Q4U2R6 128 aaKnown RBP2.39□□□□□ -2.03
TDP1-217ENST00000557782 SLC25A34Q6PIV7 304 aa2.39□□□□□ -2.03
TDP1-217ENST00000557782 Q6ZQT7 251 aa2.39□□□□□ -2.03
TDP1-217ENST00000557782 GPHB5Q86YW7 130 aa2.39□□□□□ -2.03
TDP1-217ENST00000557782 H1FOOQ8IZA3 346 aaPredicted RBP2.39□□□□□ -2.03
TDP1-217ENST00000557782 RPRMLQ8N4K4 120 aa2.39□□□□□ -2.03
TDP1-217ENST00000557782 DAND5Q8N907 189 aa2.39□□□□□ -2.03
TDP1-217ENST00000557782 C12orf29Q8N999 325 aa2.39□□□□□ -2.03
TDP1-217ENST00000557782 ST20-AS1Q8NBB2 130 aa2.39□□□□□ -2.03
TDP1-217ENST00000557782 MRPL30Q8TCC3 161 aaKnown RBP2.39□□□□□ -2.03
TDP1-217ENST00000557782 KLF14Q8TD94 323 aaPredicted RBP2.39□□□□□ -2.03
TDP1-217ENST00000557782 GPR119Q8TDV5 335 aa2.39□□□□□ -2.03
TDP1-217ENST00000557782 ZNF721Q8TF20 911 aa2.39□□□□□ -2.03
TDP1-217ENST00000557782 UBE2WQ96B02 151 aa2.39□□□□□ -2.03
TDP1-217ENST00000557782 GPR146Q96CH1 333 aa2.39□□□□□ -2.03
TDP1-217ENST00000557782 TMEM70Q9BUB7 260 aa2.39□□□□□ -2.03
TDP1-217ENST00000557782 C20orf27Q9GZN8 174 aa2.39□□□□□ -2.03
TDP1-217ENST00000557782 WDR61Q9GZS3 305 aaKnown RBP2.39□□□□□ -2.03
TDP1-217ENST00000557782 ABCG5Q9H222 651 aa2.39□□□□□ -2.03
TDP1-217ENST00000557782 SH3BGRL3Q9H299 93 aa2.39□□□□□ -2.03
TDP1-217ENST00000557782 LYRM2Q9NU23 88 aaPredicted RBP2.39□□□□□ -2.03
TDP1-217ENST00000557782 PRNDQ9UKY0 176 aa2.39□□□□□ -2.03
TDP1-217ENST00000557782 SNX12Q9UMY4 172 aa2.39□□□□□ -2.03
TDP1-217ENST00000557782 SLC35A3Q9Y2D2 325 aa2.39□□□□□ -2.03
TDP1-217ENST00000557782 LINC00588Q9Y4M8 146 aa2.39□□□□□ -2.03
TDP1-217ENST00000557782 KIF1BO60333 1816 aa2.39□□□□□ -2.03
TDP1-217ENST00000557782 KIF13BQ9NQT8 1826 aa2.39□□□□□ -2.03
TDP1-217ENST00000557782 TRAV9-1A0A075B6T8 112 aa2.38□□□□□ -2.03
TDP1-217ENST00000557782 A0A0B4J2C4 111 aa2.38□□□□□ -2.03
TDP1-217ENST00000557782 ZNF98A6NK75 572 aa2.38□□□□□ -2.03
TDP1-217ENST00000557782 CYSRT1A8MQ03 144 aa2.38□□□□□ -2.03
TDP1-217ENST00000557782 AIPO00170 330 aa2.38□□□□□ -2.03
TDP1-217ENST00000557782 SLC17A3O00476 420 aa2.38□□□□□ -2.03
TDP1-217ENST00000557782 PLA2G10O15496 165 aa2.38□□□□□ -2.03
TDP1-217ENST00000557782 DSCAMO60469 2012 aa2.38□□□□□ -2.03
TDP1-217ENST00000557782 C1QBP02746 253 aa2.38□□□□□ -2.03
TDP1-217ENST00000557782 NBEAP1P0C6P0 100 aa2.38□□□□□ -2.03
TDP1-217ENST00000557782 SPI1P17947 270 aa2.38□□□□□ -2.03
TDP1-217ENST00000557782 NPPCP23582 126 aa2.38□□□□□ -2.03
TDP1-217ENST00000557782 S100GP29377 79 aa2.38□□□□□ -2.03
TDP1-217ENST00000557782 TAF6P49848 677 aa2.38□□□□□ -2.03
TDP1-217ENST00000557782 TSPEAR-AS2P59090 65 aa2.38□□□□□ -2.03
TDP1-217ENST00000557782 RHOBP62745 196 aa2.38□□□□□ -2.03
TDP1-217ENST00000557782 HBA1P69905 142 aa2.38□□□□□ -2.03
TDP1-217ENST00000557782 LINC00483Q53H64 154 aa2.38□□□□□ -2.03
TDP1-217ENST00000557782 ZNF880Q6PDB4 577 aa2.38□□□□□ -2.03
TDP1-217ENST00000557782 WDR59Q6PJI9 974 aa2.38□□□□□ -2.03
TDP1-217ENST00000557782 C16orf47Q6ZP98 133 aaPredicted RBP2.38□□□□□ -2.03
TDP1-217ENST00000557782 ADM2Q7Z4H4 148 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms