RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 MGLLQ99685 303 aa12.04□□□□□ -0.48
SCFD1-224ENST00000557713 GINS4Q9BRT9 223 aa12.04□□□□□ -0.48
SCFD1-224ENST00000557713 CENPOQ9BU64 300 aa12.04□□□□□ -0.48
SCFD1-224ENST00000557713 NKX1-2Q9UD57 310 aaPredicted RBP12.04□□□□□ -0.48
SCFD1-224ENST00000557713 TNCP24821 2201 aa12.04□□□□□ -0.48
SCFD1-224ENST00000557713 A0A075B6Q4 140 aa12.03□□□□□ -0.48
SCFD1-224ENST00000557713 RBMY1BA6NDE4 496 aaKnown RBP12.03□□□□□ -0.48
SCFD1-224ENST00000557713 RBMY1EA6NEQ0 496 aaKnown RBP12.03□□□□□ -0.48
SCFD1-224ENST00000557713 TPPPO94811 219 aa12.03□□□□□ -0.48
SCFD1-224ENST00000557713 CD7P09564 240 aa12.03□□□□□ -0.48
SCFD1-224ENST00000557713 RBMY1DP0C7P1 496 aaKnown RBP12.03□□□□□ -0.48
SCFD1-224ENST00000557713 RAB6AP20340 208 aa12.03□□□□□ -0.48
SCFD1-224ENST00000557713 CDK10Q15131 360 aa12.03□□□□□ -0.48
SCFD1-224ENST00000557713 DEFB125Q8N687 156 aa12.03□□□□□ -0.48
SCFD1-224ENST00000557713 NECAP1Q8NC96 275 aa12.03□□□□□ -0.48
SCFD1-224ENST00000557713 KCTD12Q96CX2 325 aaKnown RBP12.03□□□□□ -0.48
SCFD1-224ENST00000557713 SPIN2AQ99865 258 aa12.03□□□□□ -0.48
SCFD1-224ENST00000557713 SPIN2BQ9BPZ2 258 aa12.03□□□□□ -0.48
SCFD1-224ENST00000557713 FAM110AQ9BQ89 295 aa12.03□□□□□ -0.48
SCFD1-224ENST00000557713 SLC2A8Q9NY64 477 aa12.03□□□□□ -0.48
SCFD1-224ENST00000557713 TRAV1-2A0A0B4J238 106 aa12.02□□□□□ -0.49
SCFD1-224ENST00000557713 ERICH4A6NGS2 130 aa12.02□□□□□ -0.49
SCFD1-224ENST00000557713 IFITM5A6NNB3 132 aa12.02□□□□□ -0.49
SCFD1-224ENST00000557713 TUSC2O75896 110 aa12.02□□□□□ -0.49
SCFD1-224ENST00000557713 SAA1P0DJI8 122 aaPredicted RBP12.02□□□□□ -0.49
SCFD1-224ENST00000557713 KIR2DS2P43631 304 aa12.02□□□□□ -0.49
SCFD1-224ENST00000557713 MAP2K4P45985 399 aa12.02□□□□□ -0.49
SCFD1-224ENST00000557713 OR10A3P58181 314 aa12.02□□□□□ -0.49
SCFD1-224ENST00000557713 C10orf55Q5SWW7 151 aa12.02□□□□□ -0.49
SCFD1-224ENST00000557713 PRSS48Q7RTY5 328 aa12.02□□□□□ -0.49
SCFD1-224ENST00000557713 MMD2Q8IY49 270 aa12.02□□□□□ -0.49
SCFD1-224ENST00000557713 ZC4H2Q9NQZ6 224 aa12.02□□□□□ -0.49
SCFD1-224ENST00000557713 ELF5Q9UKW6 265 aaPredicted RBP12.02□□□□□ -0.49
SCFD1-224ENST00000557713 C2orf70A6NJV1 201 aa12.01□□□□□ -0.49
SCFD1-224ENST00000557713 PPP5D1E7EU14 171 aa12.01□□□□□ -0.49
SCFD1-224ENST00000557713 PDCD5O14737 125 aa12.01□□□□□ -0.49
SCFD1-224ENST00000557713 CREBL2O60519 120 aaPredicted RBP12.01□□□□□ -0.49
SCFD1-224ENST00000557713 OR2J3O76001 311 aa12.01□□□□□ -0.49
SCFD1-224ENST00000557713 JTBO76095 146 aa12.01□□□□□ -0.49
SCFD1-224ENST00000557713 ACTL6BO94805 426 aa12.01□□□□□ -0.49
SCFD1-224ENST00000557713 FOLR2P14207 255 aa12.01□□□□□ -0.49
SCFD1-224ENST00000557713 EDN2P20800 178 aa12.01□□□□□ -0.49
SCFD1-224ENST00000557713 CRHBPP24387 322 aa12.01□□□□□ -0.49
SCFD1-224ENST00000557713 TALDO1P37837 337 aa12.01□□□□□ -0.49
SCFD1-224ENST00000557713 AQP4P55087 323 aa12.01□□□□□ -0.49
SCFD1-224ENST00000557713 RPL30P62888 115 aaKnown RBP12.01□□□□□ -0.49
SCFD1-224ENST00000557713 ARFRP1Q13795 201 aa12.01□□□□□ -0.49
SCFD1-224ENST00000557713 CCDC90BQ9GZT6 254 aa12.01□□□□□ -0.49
SCFD1-224ENST00000557713 WFDC10AQ9H1F0 79 aa12.01□□□□□ -0.49
SCFD1-224ENST00000557713 METTL21EPA6NDL7 271 aa12□□□□□ -0.49
SCFD1-224ENST00000557713 HMX3A6NHT5 357 aa12□□□□□ -0.49
SCFD1-224ENST00000557713 OR11H12B2RN74 326 aa12□□□□□ -0.49
SCFD1-224ENST00000557713 TEX22C9J3V5 150 aa12□□□□□ -0.49
SCFD1-224ENST00000557713 J3QRK9 145 aa12□□□□□ -0.49
SCFD1-224ENST00000557713 LGALS9O00182 355 aa12□□□□□ -0.49
SCFD1-224ENST00000557713 FCGR3BO75015 233 aa12□□□□□ -0.49
SCFD1-224ENST00000557713 GGCTO75223 188 aaKnown RBP12□□□□□ -0.49
SCFD1-224ENST00000557713 OR2C1O95371 312 aa12□□□□□ -0.49
SCFD1-224ENST00000557713 IGLV2-14P01704 120 aa12□□□□□ -0.49
SCFD1-224ENST00000557713 HLA-AP01891 365 aaKnown RBP12□□□□□ -0.49
SCFD1-224ENST00000557713 HLA-DQB1P01920 261 aa12□□□□□ -0.49
SCFD1-224ENST00000557713 SSX1Q16384 188 aa12□□□□□ -0.49
SCFD1-224ENST00000557713 C15orf32Q32M92 178 aa12□□□□□ -0.49
SCFD1-224ENST00000557713 FAM209BQ5JX69 171 aa12□□□□□ -0.49
SCFD1-224ENST00000557713 SLC25A42Q86VD7 318 aa12□□□□□ -0.49
SCFD1-224ENST00000557713 ZNF645Q8N7E2 425 aa12□□□□□ -0.49
SCFD1-224ENST00000557713 DYNLRB2Q8TF09 96 aa12□□□□□ -0.49
SCFD1-224ENST00000557713 NRG4Q8WWG1 115 aa12□□□□□ -0.49
SCFD1-224ENST00000557713 DCUN1D5Q9BTE7 237 aa12□□□□□ -0.49
SCFD1-224ENST00000557713 OR51E2Q9H255 320 aa12□□□□□ -0.49
SCFD1-224ENST00000557713 SRD5A3Q9H8P0 318 aa12□□□□□ -0.49
SCFD1-224ENST00000557713 TECRQ9NZ01 308 aaKnown RBP12□□□□□ -0.49
SCFD1-224ENST00000557713 ZNF257Q9Y2Q1 563 aa12□□□□□ -0.49
SCFD1-224ENST00000557713 OR2W1Q9Y3N9 320 aa12□□□□□ -0.49
SCFD1-224ENST00000557713 E7EUB6 86 aa11.99□□□□□ -0.49
SCFD1-224ENST00000557713 DTYMKP23919 212 aa11.99□□□□□ -0.49
SCFD1-224ENST00000557713 GUCA2BQ16661 112 aa11.99□□□□□ -0.49
SCFD1-224ENST00000557713 C19orf35Q6ZS72 473 aa11.99□□□□□ -0.49
SCFD1-224ENST00000557713 KCTD9Q7L273 389 aa11.99□□□□□ -0.49
SCFD1-224ENST00000557713 GPHB5Q86YW7 130 aa11.99□□□□□ -0.49
SCFD1-224ENST00000557713 WDR89Q96FK6 387 aaPredicted RBP11.99□□□□□ -0.49
SCFD1-224ENST00000557713 RBMX2Q9Y388 322 aaKnown RBP11.99□□□□□ -0.49
SCFD1-224ENST00000557713 PRELID3BQ9Y3B1 194 aa11.99□□□□□ -0.49
SCFD1-224ENST00000557713 ALMS1Q8TCU4 4167 aa11.99□□□□□ -0.49
SCFD1-224ENST00000557713 NPIPB5A8MRT5 1133 aa11.98□□□□□ -0.49
SCFD1-224ENST00000557713 SLC22A5O76082 557 aa11.98□□□□□ -0.49
SCFD1-224ENST00000557713 IL6RP08887 468 aaPredicted RBP11.98□□□□□ -0.49
SCFD1-224ENST00000557713 CTXN2P0C2S0 81 aa11.98□□□□□ -0.49
SCFD1-224ENST00000557713 RAB3BP20337 219 aa11.98□□□□□ -0.49
SCFD1-224ENST00000557713 CBLN1P23435 193 aa11.98□□□□□ -0.49
SCFD1-224ENST00000557713 NFYAP23511 347 aaPredicted RBP11.98□□□□□ -0.49
SCFD1-224ENST00000557713 BRWD1-AS2P59051 145 aa11.98□□□□□ -0.49
SCFD1-224ENST00000557713 EIF4EBP1Q13541 118 aaPredicted RBP11.98□□□□□ -0.49
SCFD1-224ENST00000557713 ARL6IP1Q15041 203 aa11.98□□□□□ -0.49
SCFD1-224ENST00000557713 KLK9Q2XQG4 91 aa11.98□□□□□ -0.49
SCFD1-224ENST00000557713 CDNFQ49AH0 187 aa11.98□□□□□ -0.49
SCFD1-224ENST00000557713 NR2C2APQ86WQ0 139 aa11.98□□□□□ -0.49
SCFD1-224ENST00000557713 VKORC1L1Q8N0U8 176 aa11.98□□□□□ -0.49
SCFD1-224ENST00000557713 TMEM167AQ8TBQ9 72 aa11.98□□□□□ -0.49
SCFD1-224ENST00000557713 FANCD2OSQ96PS1 177 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms