RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 NQO2P16083 231 aa10.82□□□□□ -0.68
SHMT2-234ENST00000557703 SLC6A1P30531 599 aa10.82□□□□□ -0.68
SHMT2-234ENST00000557703 MAS1LP35410 378 aa10.82□□□□□ -0.68
SHMT2-234ENST00000557703 INPP1P49441 399 aa10.82□□□□□ -0.68
SHMT2-234ENST00000557703 KLF9Q13886 244 aaPredicted RBP10.82□□□□□ -0.68
SHMT2-234ENST00000557703 SCGB2B2Q4G0G5 96 aa10.82□□□□□ -0.68
SHMT2-234ENST00000557703 SPAG16Q8N0X2 631 aa10.82□□□□□ -0.68
SHMT2-234ENST00000557703 STPG2Q8N412 459 aa10.82□□□□□ -0.68
SHMT2-234ENST00000557703 KLHDC1Q8N7A1 406 aa10.82□□□□□ -0.68
SHMT2-234ENST00000557703 OR4X2Q8NGF9 303 aa10.82□□□□□ -0.68
SHMT2-234ENST00000557703 RHOVQ96L33 236 aa10.82□□□□□ -0.68
SHMT2-234ENST00000557703 SLC25A21Q9BQT8 299 aaPredicted RBP10.82□□□□□ -0.68
SHMT2-234ENST00000557703 CCDC32Q9BV29 185 aa10.82□□□□□ -0.68
SHMT2-234ENST00000557703 SLC2A9Q9NRM0 540 aa10.82□□□□□ -0.68
SHMT2-234ENST00000557703 IGHV7-81A0A0B4J1V7 117 aa10.81□□□□□ -0.68
SHMT2-234ENST00000557703 PSMB11A5LHX3 300 aa10.81□□□□□ -0.68
SHMT2-234ENST00000557703 HAX1O00165 279 aa10.81□□□□□ -0.68
SHMT2-234ENST00000557703 MPPED1O15442 326 aa10.81□□□□□ -0.68
SHMT2-234ENST00000557703 SLC25A17O43808 307 aa10.81□□□□□ -0.68
SHMT2-234ENST00000557703 ATG12O94817 140 aa10.81□□□□□ -0.68
SHMT2-234ENST00000557703 ELANEP08246 267 aa10.81□□□□□ -0.68
SHMT2-234ENST00000557703 VSIG10L2P0DP72 767 aa10.81□□□□□ -0.68
SHMT2-234ENST00000557703 PGAM2P15259 253 aa10.81□□□□□ -0.68
SHMT2-234ENST00000557703 VDAC1P21796 283 aa10.81□□□□□ -0.68
SHMT2-234ENST00000557703 CNTFRP26992 372 aa10.81□□□□□ -0.68
SHMT2-234ENST00000557703 CD40LGP29965 261 aa10.81□□□□□ -0.68
SHMT2-234ENST00000557703 LINC00205P59089 165 aa10.81□□□□□ -0.68
SHMT2-234ENST00000557703 CX3CL1P78423 397 aa10.81□□□□□ -0.68
SHMT2-234ENST00000557703 AKIRIN2Q53H80 203 aa10.81□□□□□ -0.68
SHMT2-234ENST00000557703 TEX38Q6PEX7 206 aa10.81□□□□□ -0.68
SHMT2-234ENST00000557703 IDO2Q6ZQW0 420 aa10.81□□□□□ -0.68
SHMT2-234ENST00000557703 Q6ZS46 218 aa10.81□□□□□ -0.68
SHMT2-234ENST00000557703 MMD2Q8IY49 270 aa10.81□□□□□ -0.68
SHMT2-234ENST00000557703 OR4D10Q8NGI6 311 aa10.81□□□□□ -0.68
SHMT2-234ENST00000557703 OR51S1Q8NGJ8 323 aa10.81□□□□□ -0.68
SHMT2-234ENST00000557703 FBXL15Q9H469 300 aa10.81□□□□□ -0.68
SHMT2-234ENST00000557703 BET1LQ9NYM9 111 aa10.81□□□□□ -0.68
SHMT2-234ENST00000557703 COPZ2Q9P299 210 aa10.81□□□□□ -0.68
SHMT2-234ENST00000557703 C14orf166Q9Y224 244 aaKnown RBP10.81□□□□□ -0.68
SHMT2-234ENST00000557703 PLXNB1O43157 2135 aa10.81□□□□□ -0.68
SHMT2-234ENST00000557703 SRRM4A7MD48 611 aaKnown RBP10.8□□□□□ -0.68
SHMT2-234ENST00000557703 TNFSF12O43508 249 aa10.8□□□□□ -0.68
SHMT2-234ENST00000557703 ACTL6BO94805 426 aa10.8□□□□□ -0.68
SHMT2-234ENST00000557703 OR2A4O95047 310 aa10.8□□□□□ -0.68
SHMT2-234ENST00000557703 RLN1P04808 185 aa10.8□□□□□ -0.68
SHMT2-234ENST00000557703 PPP5CP53041 499 aa10.8□□□□□ -0.68
SHMT2-234ENST00000557703 PIGPP57054 158 aa10.8□□□□□ -0.68
SHMT2-234ENST00000557703 BRWD1-AS2P59051 145 aa10.8□□□□□ -0.68
SHMT2-234ENST00000557703 ERVK-16P61578 105 aa10.8□□□□□ -0.68
SHMT2-234ENST00000557703 OR5AU1Q8NGC0 362 aa10.8□□□□□ -0.68
SHMT2-234ENST00000557703 OR51H1Q8NH63 302 aa10.8□□□□□ -0.68
SHMT2-234ENST00000557703 TMEM167AQ8TBQ9 72 aa10.8□□□□□ -0.68
SHMT2-234ENST00000557703 OR2A7Q96R45 310 aa10.8□□□□□ -0.68
SHMT2-234ENST00000557703 TSC22D3Q99576 134 aa10.8□□□□□ -0.68
SHMT2-234ENST00000557703 WDR12Q9GZL7 423 aaKnown RBP10.8□□□□□ -0.68
SHMT2-234ENST00000557703 ZFP57Q9NU63 452 aa10.8□□□□□ -0.68
SHMT2-234ENST00000557703 MCUBQ9NWR8 336 aa10.8□□□□□ -0.68
SHMT2-234ENST00000557703 GPR132Q9UNW8 380 aa10.8□□□□□ -0.68
SHMT2-234ENST00000557703 H0Y980 276 aa10.79□□□□□ -0.68
SHMT2-234ENST00000557703 FBXO24O75426 580 aa10.79□□□□□ -0.68
SHMT2-234ENST00000557703 KBTBD11O94819 623 aa10.79□□□□□ -0.68
SHMT2-234ENST00000557703 CNIH1O95406 144 aa10.79□□□□□ -0.68
SHMT2-234ENST00000557703 BRI3O95415 125 aa10.79□□□□□ -0.68
SHMT2-234ENST00000557703 IGHG4P01861 327 aa10.79□□□□□ -0.68
SHMT2-234ENST00000557703 SERPINE2P07093 398 aa10.79□□□□□ -0.68
SHMT2-234ENST00000557703 CD83Q01151 205 aa10.79□□□□□ -0.68
SHMT2-234ENST00000557703 FOXE3Q13461 319 aa10.79□□□□□ -0.68
SHMT2-234ENST00000557703 PRSS8Q16651 343 aa10.79□□□□□ -0.68
SHMT2-234ENST00000557703 TBC1D26Q86UD7 250 aa10.79□□□□□ -0.68
SHMT2-234ENST00000557703 PUSL1Q8N0Z8 303 aaKnown RBP10.79□□□□□ -0.68
SHMT2-234ENST00000557703 RNF152Q8N8N0 203 aa10.79□□□□□ -0.68
SHMT2-234ENST00000557703 TAF15Q92804 592 aaKnown RBP eCLIP10.79□□□□□ -0.68
SHMT2-234ENST00000557703 HSPB9Q9BQS6 159 aa10.79□□□□□ -0.68
SHMT2-234ENST00000557703 HRASLSQ9HDD0 168 aa10.79□□□□□ -0.68
SHMT2-234ENST00000557703 AKIP1Q9NQ31 210 aa10.79□□□□□ -0.68
SHMT2-234ENST00000557703 KCNIP3Q9Y2W7 256 aa10.79□□□□□ -0.68
SHMT2-234ENST00000557703 NUBP2Q9Y5Y2 271 aa10.79□□□□□ -0.68
SHMT2-234ENST00000557703 ANK2Q01484 3957 aa10.78□□□□□ -0.68
SHMT2-234ENST00000557703 H3BUA1 57 aa10.78□□□□□ -0.68
SHMT2-234ENST00000557703 M0QZ24 198 aa10.78□□□□□ -0.68
SHMT2-234ENST00000557703 SAA1P0DJI8 122 aaPredicted RBP10.78□□□□□ -0.68
SHMT2-234ENST00000557703 FXYD3Q14802 87 aa10.78□□□□□ -0.68
SHMT2-234ENST00000557703 PHLDA2Q53GA4 152 aa10.78□□□□□ -0.68
SHMT2-234ENST00000557703 ZNF57Q68EA5 555 aaPredicted RBP10.78□□□□□ -0.68
SHMT2-234ENST00000557703 THOC7Q6I9Y2 204 aaKnown RBP10.78□□□□□ -0.68
SHMT2-234ENST00000557703 NDUFA11Q86Y39 141 aa10.78□□□□□ -0.68
SHMT2-234ENST00000557703 MINDY2Q8NBR6 621 aa10.78□□□□□ -0.68
SHMT2-234ENST00000557703 OR5M8Q8NGP6 311 aa10.78□□□□□ -0.68
SHMT2-234ENST00000557703 OR13C8Q8NGS7 320 aa10.78□□□□□ -0.68
SHMT2-234ENST00000557703 MARCH1Q8TCQ1 289 aa10.78□□□□□ -0.68
SHMT2-234ENST00000557703 ARPC1AQ92747 370 aa10.78□□□□□ -0.68
SHMT2-234ENST00000557703 SPIN2AQ99865 258 aa10.78□□□□□ -0.68
SHMT2-234ENST00000557703 SPIN2BQ9BPZ2 258 aa10.78□□□□□ -0.68
SHMT2-234ENST00000557703 SRSF8Q9BRL6 282 aaKnown RBP10.78□□□□□ -0.68
SHMT2-234ENST00000557703 FKBP11Q9NYL4 201 aa10.78□□□□□ -0.68
SHMT2-234ENST00000557703 CACFD1Q9UGQ2 172 aa10.78□□□□□ -0.68
SHMT2-234ENST00000557703 TSSC4Q9Y5U2 329 aaPredicted RBP10.78□□□□□ -0.68
SHMT2-234ENST00000557703 TRAV41A0A0B4J266 112 aa10.77□□□□□ -0.69
SHMT2-234ENST00000557703 C3orf85A0A1B0GTC6 90 aa10.77□□□□□ -0.69
SHMT2-234ENST00000557703 MARCH11A6NNE9 402 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms