RNA–Protein interactions for RNA: ENST00000557548.1

TRAV28-201, Transcript of T cell receptor alpha variable 28 (pseudogene), humanhuman

BASIC

Gene TRAV28, Length 323 nt, Biotype TR V pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV28-201ENST00000557548 TCEAL7Q9BRU2 100 aa2.01□□□□□ -2.09
TRAV28-201ENST00000557548 RTBDNQ9BSG5 229 aaPredicted RBP2.01□□□□□ -2.09
TRAV28-201ENST00000557548 TMEM70Q9BUB7 260 aa2.01□□□□□ -2.09
TRAV28-201ENST00000557548 CHCHD7Q9BUK0 85 aa2.01□□□□□ -2.09
TRAV28-201ENST00000557548 CCDC32Q9BV29 185 aa2.01□□□□□ -2.09
TRAV28-201ENST00000557548 PBDC1Q9BVG4 233 aa2.01□□□□□ -2.09
TRAV28-201ENST00000557548 HES4Q9HCC6 221 aa2.01□□□□□ -2.09
TRAV28-201ENST00000557548 PARP11Q9NR21 331 aa2.01□□□□□ -2.09
TRAV28-201ENST00000557548 LYRM2Q9NU23 88 aaPredicted RBP2.01□□□□□ -2.09
TRAV28-201ENST00000557548 C21orf62Q9NYP8 219 aa2.01□□□□□ -2.09
TRAV28-201ENST00000557548 COPZ2Q9P299 210 aa2.01□□□□□ -2.09
TRAV28-201ENST00000557548 ZNF780BQ9Y6R6 833 aa2.01□□□□□ -2.09
TRAV28-201ENST00000557548 MYH3P11055 1940 aa2.01□□□□□ -2.09
TRAV28-201ENST00000557548 CPS1P31327 1500 aa2.01□□□□□ -2.09
TRAV28-201ENST00000557548 EFCAB6Q5THR3 1501 aa2.01□□□□□ -2.09
TRAV28-201ENST00000557548 FAM135AQ9P2D6 1515 aa2.01□□□□□ -2.09
TRAV28-201ENST00000557548 CCDC18Q5T9S5 1454 aa2.01□□□□□ -2.09
TRAV28-201ENST00000557548 SMG6Q86US8 1419 aaKnown RBP2□□□□□ -2.09
TRAV28-201ENST00000557548 RGPD2P0DJD1 1756 aa2□□□□□ -2.09
TRAV28-201ENST00000557548 NUP188Q5SRE5 1749 aa2□□□□□ -2.09
TRAV28-201ENST00000557548 RTL1A6NKG5 1358 aa2□□□□□ -2.09
TRAV28-201ENST00000557548 TONSLQ96HA7 1378 aa2□□□□□ -2.09
TRAV28-201ENST00000557548 IGSF9BQ9UPX0 1349 aa2□□□□□ -2.09
TRAV28-201ENST00000557548 MYH10P35580 1976 aa2□□□□□ -2.09
TRAV28-201ENST00000557548 CLTCL1P53675 1640 aa2□□□□□ -2.09
TRAV28-201ENST00000557548 AHDC1Q5TGY3 1603 aaPredicted RBP2□□□□□ -2.09
TRAV28-201ENST00000557548 USP32Q8NFA0 1604 aa2□□□□□ -2.09
TRAV28-201ENST00000557548 ADAMTS9Q9P2N4 1935 aa2□□□□□ -2.09
TRAV28-201ENST00000557548 IGKV1-6A0A0C4DH72 117 aa2□□□□□ -2.09
TRAV28-201ENST00000557548 hADV38S2A0JD32 116 aa2□□□□□ -2.09
TRAV28-201ENST00000557548 C5orf58C9J3I9 102 aa2□□□□□ -2.09
TRAV28-201ENST00000557548 TRAPPC2LH3BP13 241 aa2□□□□□ -2.09
TRAV28-201ENST00000557548 MFSD11O43934 449 aa2□□□□□ -2.09
TRAV28-201ENST00000557548 SCO1O75880 301 aa2□□□□□ -2.09
TRAV28-201ENST00000557548 CDRT1O95170 752 aa2□□□□□ -2.09
TRAV28-201ENST00000557548 GADD45GO95257 159 aa2□□□□□ -2.09
TRAV28-201ENST00000557548 CCNE2O96020 404 aa2□□□□□ -2.09
TRAV28-201ENST00000557548 IGKV1-39P01597 117 aa2□□□□□ -2.09
TRAV28-201ENST00000557548 MAS1P04201 325 aa2□□□□□ -2.09
TRAV28-201ENST00000557548 IGKV1D-39P04432 117 aa2□□□□□ -2.09
TRAV28-201ENST00000557548 ATP5G1P05496 136 aa2□□□□□ -2.09
TRAV28-201ENST00000557548 CRYBA1P05813 215 aa2□□□□□ -2.09
TRAV28-201ENST00000557548 SEC11BP0C7V7 166 aa2□□□□□ -2.09
TRAV28-201ENST00000557548 GPX2P18283 190 aa2□□□□□ -2.09
TRAV28-201ENST00000557548 PHBP35232 272 aa2□□□□□ -2.09
TRAV28-201ENST00000557548 CKS1BP61024 79 aa2□□□□□ -2.09
TRAV28-201ENST00000557548 DAD1P61803 113 aa2□□□□□ -2.09
TRAV28-201ENST00000557548 HPCAP84074 193 aa2□□□□□ -2.09
TRAV28-201ENST00000557548 RUNX1Q01196 453 aa2□□□□□ -2.09
TRAV28-201ENST00000557548 PRDX4Q13162 271 aa2□□□□□ -2.09
TRAV28-201ENST00000557548 SSX1Q16384 188 aa2□□□□□ -2.09
TRAV28-201ENST00000557548 IAH1Q2TAA2 248 aaPredicted RBP2□□□□□ -2.09
TRAV28-201ENST00000557548 LUZP6Q538Z0 58 aa2□□□□□ -2.09
TRAV28-201ENST00000557548 C9orf64Q5T6V5 341 aa2□□□□□ -2.09
TRAV28-201ENST00000557548 SPATA31B1PQ5VZV4 182 aa2□□□□□ -2.09
TRAV28-201ENST00000557548 Q5W150 140 aa2□□□□□ -2.09
TRAV28-201ENST00000557548 IGFL2Q6UWQ7 119 aa2□□□□□ -2.09
TRAV28-201ENST00000557548 C4orf22Q6V702 233 aa2□□□□□ -2.09
TRAV28-201ENST00000557548 C3orf62Q6ZUJ4 267 aa2□□□□□ -2.09
TRAV28-201ENST00000557548 GOLT1AQ6ZVE7 132 aa2□□□□□ -2.09
TRAV28-201ENST00000557548 FA2HQ7L5A8 372 aa2□□□□□ -2.09
TRAV28-201ENST00000557548 ZNF550Q7Z398 422 aa2□□□□□ -2.09
TRAV28-201ENST00000557548 LINC00596Q86U02 117 aa2□□□□□ -2.09
TRAV28-201ENST00000557548 LRRC28Q86X40 367 aaPredicted RBP2□□□□□ -2.09
TRAV28-201ENST00000557548 ORMDL3Q8N138 153 aa2□□□□□ -2.09
TRAV28-201ENST00000557548 FAM24BQ8N5W8 94 aa2□□□□□ -2.09
TRAV28-201ENST00000557548 OR9Q1Q8NGQ5 310 aa2□□□□□ -2.09
TRAV28-201ENST00000557548 FAM57AQ8TBR7 257 aa2□□□□□ -2.09
TRAV28-201ENST00000557548 TMEM203Q969S6 136 aa2□□□□□ -2.09
TRAV28-201ENST00000557548 SLC25A46Q96AG3 418 aa2□□□□□ -2.09
TRAV28-201ENST00000557548 FOPNLQ96NB1 174 aa2□□□□□ -2.09
TRAV28-201ENST00000557548 PPP1R2P1Q96PQ5 205 aa2□□□□□ -2.09
TRAV28-201ENST00000557548 ANAPC13Q9BS18 74 aa2□□□□□ -2.09
TRAV28-201ENST00000557548 EFCAB11Q9BUY7 163 aa2□□□□□ -2.09
TRAV28-201ENST00000557548 RSPO3Q9BXY4 272 aaPredicted RBP2□□□□□ -2.09
TRAV28-201ENST00000557548 ZNF436Q9C0F3 470 aaPredicted RBP2□□□□□ -2.09
TRAV28-201ENST00000557548 SH3BGRL3Q9H299 93 aa2□□□□□ -2.09
TRAV28-201ENST00000557548 ZSCAN16Q9H4T2 348 aaPredicted RBP2□□□□□ -2.09
TRAV28-201ENST00000557548 PRTFDC1Q9NRG1 225 aa2□□□□□ -2.09
TRAV28-201ENST00000557548 ANAPC11Q9NYG5 84 aa2□□□□□ -2.09
TRAV28-201ENST00000557548 MRPL27Q9P0M9 148 aaKnown RBP2□□□□□ -2.09
TRAV28-201ENST00000557548 JPT1Q9UK76 154 aa2□□□□□ -2.09
TRAV28-201ENST00000557548 SSR3Q9UNL2 185 aa2□□□□□ -2.09
TRAV28-201ENST00000557548 PKIGQ9Y2B9 76 aa2□□□□□ -2.09
TRAV28-201ENST00000557548 HDGFL3Q9Y3E1 203 aa2□□□□□ -2.09
TRAV28-201ENST00000557548 YTHDF2Q9Y5A9 579 aaKnown RBP2□□□□□ -2.09
TRAV28-201ENST00000557548 ZNF706Q9Y5V0 76 aaPredicted RBP2□□□□□ -2.09
TRAV28-201ENST00000557548 ERVK-7P63135 1459 aa2□□□□□ -2.09
TRAV28-201ENST00000557548 KNDC1Q76NI1 1749 aa2□□□□□ -2.09
TRAV28-201ENST00000557548 TRPM3Q9HCF6 1732 aaPredicted RBP2□□□□□ -2.09
TRAV28-201ENST00000557548 FMN2Q9NZ56 1722 aa2□□□□□ -2.09
TRAV28-201ENST00000557548 EEA1Q15075 1411 aa2□□□□□ -2.09
TRAV28-201ENST00000557548 FMN1Q68DA7 1419 aa2□□□□□ -2.09
TRAV28-201ENST00000557548 MIA2Q96PC5 1412 aa2□□□□□ -2.09
TRAV28-201ENST00000557548 YLPM1P49750 1951 aaKnown RBP1.99□□□□□ -2.09
TRAV28-201ENST00000557548 RREB1Q92766 1687 aa1.99□□□□□ -2.09
TRAV28-201ENST00000557548 SETBP1Q9Y6X0 1596 aa1.99□□□□□ -2.09
TRAV28-201ENST00000557548 TRAV8-3A0A0A6YYJ7 113 aa1.99□□□□□ -2.09
TRAV28-201ENST00000557548 BORCS7-ASMTA0A0B4J1R7 106 aa1.99□□□□□ -2.09
TRAV28-201ENST00000557548 A0A1W2PRE2 83 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms